RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	RABGEF1	Q9UJ41	708 aa		10.15	□□□□□ -0.78
MUC4-222	ENST00000486425	NALCN	Q8IZF0	1738 aa		10.15	□□□□□ -0.78
MUC4-222	ENST00000486425	FMN2	Q9NZ56	1722 aa		10.15	□□□□□ -0.78
MUC4-222	ENST00000486425	USP54	Q70EL1	1684 aa		10.15	□□□□□ -0.79
MUC4-222	ENST00000486425	BRD4	O60885	1362 aa	Predicted RBP	10.14	□□□□□ -0.79
MUC4-222	ENST00000486425	RALBP1	Q15311	655 aa		10.14	□□□□□ -0.79
MUC4-222	ENST00000486425	ATP7B	P35670	1465 aa		10.14	□□□□□ -0.79
MUC4-222	ENST00000486425	SHPRH	Q149N8	1683 aa		10.14	□□□□□ -0.79
MUC4-222	ENST00000486425	INSR	P06213	1382 aa		10.14	□□□□□ -0.79
MUC4-222	ENST00000486425	PIK3R4	Q99570	1358 aa		10.14	□□□□□ -0.79
MUC4-222	ENST00000486425	TMEM132E	Q6IEE7	984 aa		10.13	□□□□□ -0.79
MUC4-222	ENST00000486425	NBPF3	Q9H094	633 aa		10.13	□□□□□ -0.79
MUC4-222	ENST00000486425	TRAK1	Q9UPV9	953 aa		10.13	□□□□□ -0.79
MUC4-222	ENST00000486425	CDC42BPG	Q6DT37	1551 aa		10.13	□□□□□ -0.79
MUC4-222	ENST00000486425	MET	P08581	1390 aa		10.13	□□□□□ -0.79
MUC4-222	ENST00000486425	ATAD2	Q6PL18	1390 aa		10.13	□□□□□ -0.79
MUC4-222	ENST00000486425	EVC2	Q86UK5	1308 aa		10.12	□□□□□ -0.79
MUC4-222	ENST00000486425	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.12	□□□□□ -0.79
MUC4-222	ENST00000486425	CD163L1	Q9NR16	1453 aa		10.12	□□□□□ -0.79
MUC4-222	ENST00000486425	MRPL50	Q8N5N7	158 aa	Known RBP	10.12	□□□□□ -0.79
MUC4-222	ENST00000486425	ANKRD36B	Q8N2N9	1353 aa		10.12	□□□□□ -0.79
MUC4-222	ENST00000486425	TRIM6-TRIM34	B2RNG4	842 aa		10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	HSPA1L	P34931	641 aa		10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	KCTD12	Q96CX2	325 aa	Known RBP	10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	KIAA1468	Q9P260	1216 aa		10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	HCST	Q9UBK5	93 aa		10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	MAP2	P11137	1827 aa	Known RBP	10.11	□□□□□ -0.79
MUC4-222	ENST00000486425	PTPRU	Q92729	1446 aa		10.1	□□□□□ -0.79
MUC4-222	ENST00000486425	TOM1	O60784	492 aa		10.1	□□□□□ -0.79
MUC4-222	ENST00000486425	MLLT3	P42568	568 aa	Predicted RBP	10.1	□□□□□ -0.79
MUC4-222	ENST00000486425	PANK3	Q9H999	370 aa		10.1	□□□□□ -0.79
MUC4-222	ENST00000486425	NSD2	O96028	1365 aa		10.1	□□□□□ -0.79
MUC4-222	ENST00000486425	NPHP4	O75161	1426 aa	Predicted RBP	10.09	□□□□□ -0.79
MUC4-222	ENST00000486425	LTK	P29376	864 aa		10.09	□□□□□ -0.79
MUC4-222	ENST00000486425	MARF1	Q9Y4F3	1742 aa	Known RBP	10.08	□□□□□ -0.8
MUC4-222	ENST00000486425	LAPTM4B	Q86VI4	370 aa		10.08	□□□□□ -0.8
MUC4-222	ENST00000486425	POLR3GL	Q9BT43	218 aa		10.08	□□□□□ -0.8
MUC4-222	ENST00000486425	STRCP1	A6NGW2	1772 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	MED1	Q15648	1581 aa	Predicted RBP	10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	GOLGA8CP	A6NN73	597 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	PIP4K2B	P78356	416 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	NLRP13	Q86W25	1043 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	VSIG10	Q8N0Z9	540 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	PRAM1	Q96QH2	718 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	CDHR5	Q9HBB8	845 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	TSKS	Q9UJT2	592 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	TBX22	Q9Y458	520 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	EID1	Q9Y6B2	187 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	LRRC7	Q96NW7	1537 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	NSD3	Q9BZ95	1437 aa		10.07	□□□□□ -0.8
MUC4-222	ENST00000486425	ROBO2	Q9HCK4	1378 aa		10.06	□□□□□ -0.8
MUC4-222	ENST00000486425	PLEKHH1	Q9ULM0	1364 aa		10.06	□□□□□ -0.8
MUC4-222	ENST00000486425	XIRP1	Q702N8	1843 aa	Known RBP	10.06	□□□□□ -0.8
MUC4-222	ENST00000486425	PRSS12	P56730	875 aa		10.06	□□□□□ -0.8
MUC4-222	ENST00000486425	WNT2B	Q93097	391 aa		10.06	□□□□□ -0.8
MUC4-222	ENST00000486425	BLM	P54132	1417 aa	Predicted RBP	10.06	□□□□□ -0.8
MUC4-222	ENST00000486425	CPSF1	Q10570	1443 aa	Known RBP	10.06	□□□□□ -0.8
MUC4-222	ENST00000486425		A0A1W2PP64	1363 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	SEMA3E	O15041	775 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	CCDC184	Q52MB2	194 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	PACS2	Q86VP3	889 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	TXNDC2	Q86VQ3	553 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	CDCA7L	Q96GN5	454 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	YTHDC1	Q96MU7	727 aa	Known RBP	10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	MRS2	Q9HD23	443 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	KNSTRN	Q9Y448	316 aa		10.05	□□□□□ -0.8
MUC4-222	ENST00000486425	THSD4	Q6ZMP0	1018 aa		10.04	□□□□□ -0.8
MUC4-222	ENST00000486425	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.04	□□□□□ -0.8
MUC4-222	ENST00000486425	NKTR	P30414	1462 aa	Known RBP	10.04	□□□□□ -0.8
MUC4-222	ENST00000486425	CARD14	Q9BXL6	1004 aa		10.03	□□□□□ -0.8
MUC4-222	ENST00000486425	POGK	Q9P215	609 aa		10.03	□□□□□ -0.8
MUC4-222	ENST00000486425	RBM27	Q9P2N5	1060 aa	Known RBP	10.03	□□□□□ -0.8
MUC4-222	ENST00000486425	KIF1A	Q12756	1690 aa		10.02	□□□□□ -0.8
MUC4-222	ENST00000486425	ANKAR	Q7Z5J8	1434 aa		10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	FAM98C	Q17RN3	349 aa	Known RBP	10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	PNISR	Q8TF01	805 aa	Known RBP	10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	ZFR	Q96KR1	1074 aa	Known RBP	10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	STK26	Q9P289	416 aa		10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	FAM198A	Q9UFP1	575 aa		10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	ZBED9	Q6R2W3	1325 aa		10.02	□□□□□ -0.81
MUC4-222	ENST00000486425	POLR3A	O14802	1390 aa	Predicted RBP	10.01	□□□□□ -0.81
MUC4-222	ENST00000486425	EDC4	Q6P2E9	1401 aa	Known RBP	10.01	□□□□□ -0.81
MUC4-222	ENST00000486425	RGS17	Q9UGC6	210 aa	Predicted RBP	10.01	□□□□□ -0.81
MUC4-222	ENST00000486425	PIK3C2A	O00443	1686 aa		10.01	□□□□□ -0.81
MUC4-222	ENST00000486425	CGNL1	Q0VF96	1302 aa		10.01	□□□□□ -0.81
MUC4-222	ENST00000486425	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.01	□□□□□ -0.81
MUC4-222	ENST00000486425	PPIP5K1	Q6PFW1	1433 aa		10	□□□□□ -0.81
MUC4-222	ENST00000486425	SMG6	Q86US8	1419 aa	Known RBP	10	□□□□□ -0.81
MUC4-222	ENST00000486425	COL3A1	P02461	1466 aa	Predicted RBP	10	□□□□□ -0.81
MUC4-222	ENST00000486425	TESPA1	A2RU30	521 aa	Predicted RBP	10	□□□□□ -0.81
MUC4-222	ENST00000486425	WASL	O00401	505 aa	Predicted RBP	10	□□□□□ -0.81
MUC4-222	ENST00000486425	ANKK1	Q8NFD2	765 aa		10	□□□□□ -0.81
MUC4-222	ENST00000486425	CDK19	Q9BWU1	502 aa		10	□□□□□ -0.81
MUC4-222	ENST00000486425	PHRF1	Q9P1Y6	1649 aa	Known RBP	10	□□□□□ -0.81
MUC4-222	ENST00000486425	PPP2R1A	P30153	589 aa		9.99	□□□□□ -0.81
MUC4-222	ENST00000486425	PTPN5	P54829	565 aa		9.99	□□□□□ -0.81
MUC4-222	ENST00000486425	WAPL	Q7Z5K2	1190 aa		9.99	□□□□□ -0.81
MUC4-222	ENST00000486425	TTC13	Q8NBP0	860 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms