RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 DDX10Q13206 875 aaKnown RBP26.84■■□□□ 1.89
LIMK1-206ENST00000486361 TNS1Q9HBL0 1735 aaKnown RBP26.84■■□□□ 1.89
LIMK1-206ENST00000486361 BCL11BQ9C0K0 894 aaPredicted RBP26.83■■□□□ 1.89
LIMK1-206ENST00000486361 CAMKK2Q96RR4 588 aa26.82■■□□□ 1.88
LIMK1-206ENST00000486361 BCL9O00512 1426 aa26.82■■□□□ 1.88
LIMK1-206ENST00000486361 IL13P35225 146 aa26.81■■□□□ 1.88
LIMK1-206ENST00000486361 NCAPD2Q15021 1401 aa26.81■■□□□ 1.88
LIMK1-206ENST00000486361 SBF2Q86WG5 1849 aa26.8■■□□□ 1.88
LIMK1-206ENST00000486361 IGSF1Q8N6C5 1336 aa26.79■■□□□ 1.88
LIMK1-206ENST00000486361 AEBP1Q8IUX7 1158 aa26.78■■□□□ 1.88
LIMK1-206ENST00000486361 CYP27B1O15528 508 aa26.76■■□□□ 1.87
LIMK1-206ENST00000486361 SHANK3Q9BYB0 1731 aa26.76■■□□□ 1.87
LIMK1-206ENST00000486361 SULT6B1Q6IMI4 303 aa26.75■■□□□ 1.87
LIMK1-206ENST00000486361 DIAPH1O60610 1272 aaKnown RBP26.74■■□□□ 1.87
LIMK1-206ENST00000486361 PPP2R1AP30153 589 aa26.74■■□□□ 1.87
LIMK1-206ENST00000486361 SYTL4Q96C24 671 aaPredicted RBP26.74■■□□□ 1.87
LIMK1-206ENST00000486361 PCDH11XQ9BZA7 1347 aa26.73■■□□□ 1.87
LIMK1-206ENST00000486361 PCDH11YQ9BZA8 1340 aa26.73■■□□□ 1.87
LIMK1-206ENST00000486361 PRIM1P49642 420 aaKnown RBP26.73■■□□□ 1.87
LIMK1-206ENST00000486361 SPG7Q9UQ90 795 aa26.73■■□□□ 1.87
LIMK1-206ENST00000486361 KAT6BQ8WYB5 2073 aa26.72■■□□□ 1.87
LIMK1-206ENST00000486361 PLSCR1O15162 318 aa26.71■■□□□ 1.87
LIMK1-206ENST00000486361 HMOX1P09601 288 aa26.7■■□□□ 1.86
LIMK1-206ENST00000486361 PROM2Q8N271 834 aa26.69■■□□□ 1.86
LIMK1-206ENST00000486361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.68■■□□□ 1.86
LIMK1-206ENST00000486361 NHSQ6T4R5 1651 aa26.68■■□□□ 1.86
LIMK1-206ENST00000486361 PSDA5PKW4 1024 aaPredicted RBP26.67■■□□□ 1.86
LIMK1-206ENST00000486361 U2SURPO15042 1029 aaKnown RBP26.67■■□□□ 1.86
LIMK1-206ENST00000486361 PKD1L3Q7Z443 1732 aa26.66■■□□□ 1.86
LIMK1-206ENST00000486361 PLEKHO1Q53GL0 409 aaPredicted RBP26.66■■□□□ 1.86
LIMK1-206ENST00000486361 PARD3Q8TEW0 1356 aa26.66■■□□□ 1.86
LIMK1-206ENST00000486361 COL3A1P02461 1466 aaPredicted RBP26.66■■□□□ 1.86
LIMK1-206ENST00000486361 PHKG2P15735 406 aa26.65■■□□□ 1.86
LIMK1-206ENST00000486361 IFNL2Q8IZJ0 200 aa26.65■■□□□ 1.86
LIMK1-206ENST00000486361 CFAP53Q96M91 514 aa26.65■■□□□ 1.86
LIMK1-206ENST00000486361 TXNRD1Q16881 649 aa26.64■■□□□ 1.86
LIMK1-206ENST00000486361 KDRP35968 1356 aa26.63■■□□□ 1.85
LIMK1-206ENST00000486361 DOT1LQ8TEK3 1739 aa26.63■■□□□ 1.85
LIMK1-206ENST00000486361 NKX1-1Q15270 411 aaPredicted RBP26.63■■□□□ 1.85
LIMK1-206ENST00000486361 R3HDM1Q15032 1099 aaKnown RBP26.62■■□□□ 1.85
LIMK1-206ENST00000486361 ZNF530Q6P9A1 599 aaPredicted RBP26.62■■□□□ 1.85
LIMK1-206ENST00000486361 MPRIPQ6WCQ1 1025 aa26.62■■□□□ 1.85
LIMK1-206ENST00000486361 BTAF1O14981 1849 aa26.61■■□□□ 1.85
LIMK1-206ENST00000486361 AMOTQ4VCS5 1084 aa26.61■■□□□ 1.85
LIMK1-206ENST00000486361 ZNF316A6NFI3 1004 aaPredicted RBP26.6■■□□□ 1.85
LIMK1-206ENST00000486361 RREB1Q92766 1687 aa26.59■■□□□ 1.85
LIMK1-206ENST00000486361 NBPF14Q5TI25 921 aa26.58■■□□□ 1.85
LIMK1-206ENST00000486361 NUP188Q5SRE5 1749 aa26.57■■□□□ 1.84
LIMK1-206ENST00000486361 KCNQ4P56696 695 aa26.56■■□□□ 1.84
LIMK1-206ENST00000486361 RALBP1Q15311 655 aa26.56■■□□□ 1.84
LIMK1-206ENST00000486361 C1orf141Q5JVX7 400 aa26.55■■□□□ 1.84
LIMK1-206ENST00000486361 PIGBQ92521 554 aa26.55■■□□□ 1.84
LIMK1-206ENST00000486361 ANO8Q9HCE9 1232 aaPredicted RBP26.55■■□□□ 1.84
LIMK1-206ENST00000486361 LRRC4BQ9NT99 713 aa26.55■■□□□ 1.84
LIMK1-206ENST00000486361 NUDCQ9Y266 331 aa26.55■■□□□ 1.84
LIMK1-206ENST00000486361 TOGARAM1Q9Y4F4 1720 aa26.55■■□□□ 1.84
LIMK1-206ENST00000486361 PLEKHG2Q9H7P9 1386 aa26.55■■□□□ 1.84
LIMK1-206ENST00000486361 RGPD3A6NKT7 1758 aaPredicted RBP26.53■■□□□ 1.84
LIMK1-206ENST00000486361 RGPD4Q7Z3J3 1758 aa26.53■■□□□ 1.84
LIMK1-206ENST00000486361 U2AF1L5P0DN76 240 aaPredicted RBP26.53■■□□□ 1.84
LIMK1-206ENST00000486361 U2AF1Q01081 240 aaKnown RBP eCLIP26.53■■□□□ 1.84
LIMK1-206ENST00000486361 MTHFSDQ2M296 383 aaKnown RBP26.53■■□□□ 1.84
LIMK1-206ENST00000486361 HSP90AB1P08238 724 aaKnown RBP26.51■■□□□ 1.83
LIMK1-206ENST00000486361 DCAF5Q96JK2 942 aa26.51■■□□□ 1.83
LIMK1-206ENST00000486361 TMOD3Q9NYL9 352 aa26.51■■□□□ 1.83
LIMK1-206ENST00000486361 KDM6AO15550 1401 aaPredicted RBP26.49■■□□□ 1.83
LIMK1-206ENST00000486361 PRKAR2BP31323 418 aa26.49■■□□□ 1.83
LIMK1-206ENST00000486361 RSPH6AQ9H0K4 717 aa26.49■■□□□ 1.83
LIMK1-206ENST00000486361 ITGB4P16144 1822 aa26.49■■□□□ 1.83
LIMK1-206ENST00000486361 AKAP4Q5JQC9 854 aa26.48■■□□□ 1.83
LIMK1-206ENST00000486361 PHACTR3Q96KR7 559 aa26.48■■□□□ 1.83
LIMK1-206ENST00000486361 ERVV-2B6SEH9 535 aa26.47■■□□□ 1.83
LIMK1-206ENST00000486361 LGR6Q9HBX8 967 aa26.47■■□□□ 1.83
LIMK1-206ENST00000486361 STK32BQ9NY57 414 aa26.47■■□□□ 1.83
LIMK1-206ENST00000486361 CCNL1Q9UK58 526 aaPredicted RBP26.47■■□□□ 1.83
LIMK1-206ENST00000486361 ASAP1Q9ULH1 1129 aa26.47■■□□□ 1.83
LIMK1-206ENST00000486361 PALLDQ8WX93 1383 aa26.46■■□□□ 1.83
LIMK1-206ENST00000486361 CABP4P57796 275 aa26.46■■□□□ 1.83
LIMK1-206ENST00000486361 SLC27A3Q5K4L6 730 aa26.46■■□□□ 1.83
LIMK1-206ENST00000486361 MYBBP1AQ9BQG0 1328 aaKnown RBP26.45■■□□□ 1.83
LIMK1-206ENST00000486361 SLC15A2Q16348 729 aa26.45■■□□□ 1.82
LIMK1-206ENST00000486361 PRKRIP1Q9H875 184 aaPredicted RBP26.45■■□□□ 1.82
LIMK1-206ENST00000486361 ZNF827Q17R98 1081 aa26.44■■□□□ 1.82
LIMK1-206ENST00000486361 SMARCC1Q92922 1105 aaPredicted RBP26.44■■□□□ 1.82
LIMK1-206ENST00000486361 PDGFDQ9GZP0 370 aaPredicted RBP26.44■■□□□ 1.82
LIMK1-206ENST00000486361 ATG3Q9NT62 314 aa26.44■■□□□ 1.82
LIMK1-206ENST00000486361 FCHSD2O94868 740 aa26.43■■□□□ 1.82
LIMK1-206ENST00000486361 NFATC2IPQ8NCF5 419 aa26.43■■□□□ 1.82
LIMK1-206ENST00000486361 RNMTO43148 476 aaKnown RBP26.42■■□□□ 1.82
LIMK1-206ENST00000486361 LY75O60449 1722 aa26.41■■□□□ 1.82
LIMK1-206ENST00000486361 GAS2L2Q8NHY3 880 aa26.4■■□□□ 1.82
LIMK1-206ENST00000486361 AKT1S1Q96B36 256 aa26.39■■□□□ 1.82
LIMK1-206ENST00000486361 PAPPAQ13219 1627 aa26.37■■□□□ 1.81
LIMK1-206ENST00000486361 LOC102724428A0A0B4J2F2 783 aa26.37■■□□□ 1.81
LIMK1-206ENST00000486361 GNAT3A8MTJ3 354 aa26.37■■□□□ 1.81
LIMK1-206ENST00000486361 SIK1P57059 783 aa26.37■■□□□ 1.81
LIMK1-206ENST00000486361 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
LIMK1-206ENST00000486361 RBM42Q9BTD8 480 aaKnown RBP26.36■■□□□ 1.81
LIMK1-206ENST00000486361 SLC52A2Q9HAB3 445 aa26.36■■□□□ 1.81
LIMK1-206ENST00000486361 MAP3K5Q99683 1374 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms