RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
SNX21-211ENST00000486336 NSD2O96028 1365 aa15.06■□□□□ 0
SNX21-211ENST00000486336 MEGF6O75095 1541 aa15.06■□□□□ 0
SNX21-211ENST00000486336 EYA1Q99502 592 aa15.05■□□□□ -0
SNX21-211ENST00000486336 ANKRD26Q9UPS8 1709 aa15.04■□□□□ -0
SNX21-211ENST00000486336 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
SNX21-211ENST00000486336 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
SNX21-211ENST00000486336 TXNRD1Q16881 649 aa15.04■□□□□ -0
SNX21-211ENST00000486336 CC2D1BQ5T0F9 858 aaKnown RBP15.04■□□□□ -0
SNX21-211ENST00000486336 PROM2Q8N271 834 aa15.04■□□□□ -0
SNX21-211ENST00000486336 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
SNX21-211ENST00000486336 RREB1Q92766 1687 aa15.01□□□□□ -0.01
SNX21-211ENST00000486336 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
SNX21-211ENST00000486336 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
SNX21-211ENST00000486336 NHSQ6T4R5 1651 aa15□□□□□ -0.01
SNX21-211ENST00000486336 PCDH11XQ9BZA7 1347 aa15□□□□□ -0.01
SNX21-211ENST00000486336 PCDH11YQ9BZA8 1340 aa15□□□□□ -0.01
SNX21-211ENST00000486336 PER1O15534 1290 aaPredicted RBP15□□□□□ -0.01
SNX21-211ENST00000486336 STK32BQ9NY57 414 aa15□□□□□ -0.01
SNX21-211ENST00000486336 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
SNX21-211ENST00000486336 CYP27B1O15528 508 aa14.98□□□□□ -0.01
SNX21-211ENST00000486336 BTAF1O14981 1849 aa14.97□□□□□ -0.01
SNX21-211ENST00000486336 MTHFSP49914 203 aa14.97□□□□□ -0.01
SNX21-211ENST00000486336 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
SNX21-211ENST00000486336 RGPD3A6NKT7 1758 aaPredicted RBP14.96□□□□□ -0.01
SNX21-211ENST00000486336 RGPD4Q7Z3J3 1758 aa14.96□□□□□ -0.01
SNX21-211ENST00000486336 KCNQ4P56696 695 aa14.96□□□□□ -0.01
SNX21-211ENST00000486336 SHANK3Q9BYB0 1731 aa14.96□□□□□ -0.01
SNX21-211ENST00000486336 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
SNX21-211ENST00000486336 DOT1LQ8TEK3 1739 aa14.95□□□□□ -0.02
SNX21-211ENST00000486336 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
SNX21-211ENST00000486336 NCAPD2Q15021 1401 aa14.94□□□□□ -0.02
SNX21-211ENST00000486336 PLEKHO1Q53GL0 409 aaPredicted RBP14.94□□□□□ -0.02
SNX21-211ENST00000486336 SULT6B1Q6IMI4 303 aa14.94□□□□□ -0.02
SNX21-211ENST00000486336 AEBP1Q8IUX7 1158 aa14.94□□□□□ -0.02
SNX21-211ENST00000486336 IFNL2Q8IZJ0 200 aa14.94□□□□□ -0.02
SNX21-211ENST00000486336 LRRC4BQ9NT99 713 aa14.94□□□□□ -0.02
SNX21-211ENST00000486336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX21-211ENST00000486336 IL13P35225 146 aa14.93□□□□□ -0.02
SNX21-211ENST00000486336 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
SNX21-211ENST00000486336 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
SNX21-211ENST00000486336 SRCAPQ6ZRS2 3230 aa14.93□□□□□ -0.02
SNX21-211ENST00000486336 ZBTB7AO95365 584 aa14.92□□□□□ -0.02
SNX21-211ENST00000486336 PHKG2P15735 406 aa14.92□□□□□ -0.02
SNX21-211ENST00000486336 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
SNX21-211ENST00000486336 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
SNX21-211ENST00000486336 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
SNX21-211ENST00000486336 DIAPH1O60610 1272 aaKnown RBP14.91□□□□□ -0.02
SNX21-211ENST00000486336 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
SNX21-211ENST00000486336 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
SNX21-211ENST00000486336 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
SNX21-211ENST00000486336 PKD1L3Q7Z443 1732 aa14.9□□□□□ -0.02
SNX21-211ENST00000486336 HMOX1P09601 288 aa14.9□□□□□ -0.02
SNX21-211ENST00000486336 ZNF827Q17R98 1081 aa14.9□□□□□ -0.02
SNX21-211ENST00000486336 AMOTQ4VCS5 1084 aa14.9□□□□□ -0.02
SNX21-211ENST00000486336 PIGBQ92521 554 aa14.9□□□□□ -0.02
SNX21-211ENST00000486336 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
SNX21-211ENST00000486336 LRP5O75197 1615 aa14.89□□□□□ -0.03
SNX21-211ENST00000486336 NPC1L1Q9UHC9 1359 aa14.89□□□□□ -0.03
SNX21-211ENST00000486336 C1orf141Q5JVX7 400 aa14.89□□□□□ -0.03
SNX21-211ENST00000486336 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
SNX21-211ENST00000486336 TFCP2L1Q9NZI6 479 aa14.89□□□□□ -0.03
SNX21-211ENST00000486336 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
SNX21-211ENST00000486336 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
SNX21-211ENST00000486336 PALLDQ8WX93 1383 aa14.87□□□□□ -0.03
SNX21-211ENST00000486336 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
SNX21-211ENST00000486336 MSH5O43196 834 aa14.86□□□□□ -0.03
SNX21-211ENST00000486336 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
SNX21-211ENST00000486336 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
SNX21-211ENST00000486336 CABP4P57796 275 aa14.85□□□□□ -0.03
SNX21-211ENST00000486336 ASAP1Q9ULH1 1129 aa14.85□□□□□ -0.03
SNX21-211ENST00000486336 TOGARAM1Q9Y4F4 1720 aa14.85□□□□□ -0.03
SNX21-211ENST00000486336 ITGB4P16144 1822 aa14.85□□□□□ -0.03
SNX21-211ENST00000486336 ERVV-2B6SEH9 535 aa14.84□□□□□ -0.03
SNX21-211ENST00000486336 MTFR1LQ9H019 292 aa14.84□□□□□ -0.03
SNX21-211ENST00000486336 PLEKHG2Q9H7P9 1386 aa14.84□□□□□ -0.03
SNX21-211ENST00000486336 LY75O60449 1722 aa14.83□□□□□ -0.03
SNX21-211ENST00000486336 HMGB2P26583 209 aaKnown RBP14.83□□□□□ -0.04
SNX21-211ENST00000486336 PPP2R1AP30153 589 aa14.83□□□□□ -0.04
SNX21-211ENST00000486336 ATG3Q9NT62 314 aa14.83□□□□□ -0.04
SNX21-211ENST00000486336 PAPPAQ13219 1627 aa14.83□□□□□ -0.04
SNX21-211ENST00000486336 KDRP35968 1356 aa14.83□□□□□ -0.04
SNX21-211ENST00000486336 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
SNX21-211ENST00000486336 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
SNX21-211ENST00000486336 ATP6V1AP38606 617 aa14.82□□□□□ -0.04
SNX21-211ENST00000486336 SIK1P57059 783 aa14.82□□□□□ -0.04
SNX21-211ENST00000486336 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
SNX21-211ENST00000486336 PNPLA7Q6ZV29 1317 aa14.82□□□□□ -0.04
SNX21-211ENST00000486336 AKAP4Q5JQC9 854 aa14.81□□□□□ -0.04
SNX21-211ENST00000486336 NFATC2IPQ8NCF5 419 aa14.81□□□□□ -0.04
SNX21-211ENST00000486336 AK7Q96M32 723 aa14.81□□□□□ -0.04
SNX21-211ENST00000486336 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
SNX21-211ENST00000486336 PTGER2P43116 358 aa14.8□□□□□ -0.04
SNX21-211ENST00000486336 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
SNX21-211ENST00000486336 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
SNX21-211ENST00000486336 COL23A1Q86Y22 540 aaPredicted RBP14.8□□□□□ -0.04
SNX21-211ENST00000486336 KDM6AO15550 1401 aaPredicted RBP14.79□□□□□ -0.04
SNX21-211ENST00000486336 SLC16A10Q8TF71 515 aa14.79□□□□□ -0.04
SNX21-211ENST00000486336 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
SNX21-211ENST00000486336 COL3A1P02461 1466 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms