RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
THBS3-207ENST00000486260 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
THBS3-207ENST00000486260 ATRNO75882 1429 aa21.81■■□□□ 1.08
THBS3-207ENST00000486260 PLEKHO1Q53GL0 409 aaPredicted RBP21.8■■□□□ 1.08
THBS3-207ENST00000486260 OVOS2A0A0G2JMS6 1433 aa21.79■■□□□ 1.08
THBS3-207ENST00000486260 GJD4Q96KN9 370 aaPredicted RBP21.79■■□□□ 1.08
THBS3-207ENST00000486260 DISP2A7MBM2 1401 aa21.79■■□□□ 1.08
THBS3-207ENST00000486260 AMOTQ4VCS5 1084 aa21.79■■□□□ 1.08
THBS3-207ENST00000486260 PARP4Q9UKK3 1724 aaKnown RBP21.78■■□□□ 1.08
THBS3-207ENST00000486260 RIPK4P57078 832 aa21.78■■□□□ 1.08
THBS3-207ENST00000486260 ZNF772Q68DY9 489 aaPredicted RBP21.78■■□□□ 1.08
THBS3-207ENST00000486260 BARGINQ6ZT62 677 aa21.78■■□□□ 1.08
THBS3-207ENST00000486260 GAS2L2Q8NHY3 880 aa21.78■■□□□ 1.08
THBS3-207ENST00000486260 FAM98CQ17RN3 349 aaKnown RBP21.77■■□□□ 1.08
THBS3-207ENST00000486260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.76■■□□□ 1.07
THBS3-207ENST00000486260 SPG7Q9UQ90 795 aa21.76■■□□□ 1.07
THBS3-207ENST00000486260 WNK3Q9BYP7 1800 aa21.76■■□□□ 1.07
THBS3-207ENST00000486260 GLI3P10071 1580 aa21.76■■□□□ 1.07
THBS3-207ENST00000486260 ZNF530Q6P9A1 599 aaPredicted RBP21.76■■□□□ 1.07
THBS3-207ENST00000486260 ZCRB1Q8TBF4 217 aaKnown RBP21.76■■□□□ 1.07
THBS3-207ENST00000486260 PLEKHG2Q9H7P9 1386 aa21.75■■□□□ 1.07
THBS3-207ENST00000486260 CDCA7Q9BWT1 371 aaPredicted RBP21.75■■□□□ 1.07
THBS3-207ENST00000486260 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
THBS3-207ENST00000486260 PKD1L3Q7Z443 1732 aa21.74■■□□□ 1.07
THBS3-207ENST00000486260 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
THBS3-207ENST00000486260 TRIM35Q9UPQ4 493 aa21.74■■□□□ 1.07
THBS3-207ENST00000486260 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
THBS3-207ENST00000486260 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
THBS3-207ENST00000486260 EXOC5O00471 708 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 NCBP3Q53F19 620 aaKnown RBP21.71■■□□□ 1.07
THBS3-207ENST00000486260 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 ZBED9Q6R2W3 1325 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 CYP27B1O15528 508 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 CCDC27Q2M243 656 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 AKAP4Q5JQC9 854 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
THBS3-207ENST00000486260 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
THBS3-207ENST00000486260 MAP3K5Q99683 1374 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 A0A0G2JS52 829 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 PHKG2P15735 406 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 MYT1Q01538 1121 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 DCTN1Q14203 1278 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 DDB1Q16531 1140 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 PCDH11XQ9BZA7 1347 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 PCDH11YQ9BZA8 1340 aa21.7■■□□□ 1.06
THBS3-207ENST00000486260 SHANK3Q9BYB0 1731 aa21.69■■□□□ 1.06
THBS3-207ENST00000486260 IFNL2Q8IZJ0 200 aa21.69■■□□□ 1.06
THBS3-207ENST00000486260 LMOD3Q0VAK6 560 aa21.69■■□□□ 1.06
THBS3-207ENST00000486260 MCM10Q7L590 875 aa21.69■■□□□ 1.06
THBS3-207ENST00000486260 THUMPD2Q9BTF0 503 aaKnown RBP21.69■■□□□ 1.06
THBS3-207ENST00000486260 ZNF521Q96K83 1311 aa21.68■■□□□ 1.06
THBS3-207ENST00000486260 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
THBS3-207ENST00000486260 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
THBS3-207ENST00000486260 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
THBS3-207ENST00000486260 TNS2Q63HR2 1409 aa21.68■■□□□ 1.06
THBS3-207ENST00000486260 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
THBS3-207ENST00000486260 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
THBS3-207ENST00000486260 THSD7AQ9UPZ6 1657 aa21.67■■□□□ 1.06
THBS3-207ENST00000486260 HTATSF1O43719 755 aaKnown RBP21.66■■□□□ 1.06
THBS3-207ENST00000486260 POTEAQ6S8J7 498 aa21.66■■□□□ 1.06
THBS3-207ENST00000486260 IL17REQ8NFR9 667 aa21.66■■□□□ 1.06
THBS3-207ENST00000486260 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
THBS3-207ENST00000486260 SEPT12Q8IYM1 358 aa21.65■■□□□ 1.06
THBS3-207ENST00000486260 RXRBP28702 533 aa21.64■■□□□ 1.05
THBS3-207ENST00000486260 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
THBS3-207ENST00000486260 WDR63Q8IWG1 891 aa21.63■■□□□ 1.05
THBS3-207ENST00000486260 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
THBS3-207ENST00000486260 NKX1-1Q15270 411 aaPredicted RBP21.62■■□□□ 1.05
THBS3-207ENST00000486260 MARCH10Q8NA82 808 aaPredicted RBP21.62■■□□□ 1.05
THBS3-207ENST00000486260 KDM6AO15550 1401 aaPredicted RBP21.62■■□□□ 1.05
THBS3-207ENST00000486260 GOLGA2Q08379 1002 aa21.61■■□□□ 1.05
THBS3-207ENST00000486260 PDE3BQ13370 1112 aa21.61■■□□□ 1.05
THBS3-207ENST00000486260 CDCA7LQ96GN5 454 aa21.61■■□□□ 1.05
THBS3-207ENST00000486260 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
THBS3-207ENST00000486260 SPINK5Q9NQ38 1064 aaPredicted RBP21.61■■□□□ 1.05
THBS3-207ENST00000486260 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
THBS3-207ENST00000486260 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
THBS3-207ENST00000486260 SCN11AQ9UI33 1791 aa21.59■■□□□ 1.05
THBS3-207ENST00000486260 ADAMTS7Q9UKP4 1686 aa21.59■■□□□ 1.05
THBS3-207ENST00000486260 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
THBS3-207ENST00000486260 LAS1LQ9Y4W2 734 aaKnown RBP21.58■■□□□ 1.04
THBS3-207ENST00000486260 IL16Q14005 1332 aa21.57■■□□□ 1.04
THBS3-207ENST00000486260 TEFQ10587 303 aa21.56■■□□□ 1.04
THBS3-207ENST00000486260 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
THBS3-207ENST00000486260 FAM182BQ5T319 152 aa21.55■■□□□ 1.04
THBS3-207ENST00000486260 BRWD3Q6RI45 1802 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 ERVV-2B6SEH9 535 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 E9PSI1 815 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 TAF7Q15545 349 aaPredicted RBP21.54■■□□□ 1.04
THBS3-207ENST00000486260 NFATC2IPQ8NCF5 419 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 SLC52A2Q9HAB3 445 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 IFT57Q9NWB7 429 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 MIS18AQ9NYP9 233 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 TOGARAM1Q9Y4F4 1720 aa21.54■■□□□ 1.04
THBS3-207ENST00000486260 ZNF853P0CG23 659 aa21.53■■□□□ 1.04
THBS3-207ENST00000486260 CABP4P57796 275 aa21.53■■□□□ 1.04
THBS3-207ENST00000486260 GNAI1P63096 354 aa21.53■■□□□ 1.04
THBS3-207ENST00000486260 RGS12O14924 1447 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms