RNA–Protein interactions for RNA: ENST00000486234.1

AUP1-208, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 5

Gene AUP1, Length 984 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-208ENST00000486234 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.396e-7■■■■□ 20.5
AUP1-208ENST00000486234 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
AUP1-208ENST00000486234 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
AUP1-208ENST00000486234 BCL9O00512 1426 aa17.45■□□□□ 0.38
AUP1-208ENST00000486234 TNS2Q63HR2 1409 aa17.45■□□□□ 0.38
AUP1-208ENST00000486234 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
AUP1-208ENST00000486234 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
AUP1-208ENST00000486234 MEGF6O75095 1541 aa17.43■□□□□ 0.38
AUP1-208ENST00000486234 NEFMP07197 916 aa17.43■□□□□ 0.38
AUP1-208ENST00000486234 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
AUP1-208ENST00000486234 AEBP1Q8IUX7 1158 aa17.43■□□□□ 0.38
AUP1-208ENST00000486234 HMOX1P09601 288 aa17.42■□□□□ 0.38
AUP1-208ENST00000486234 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.388e-8■■■■□ 26
AUP1-208ENST00000486234 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
AUP1-208ENST00000486234 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
AUP1-208ENST00000486234 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
AUP1-208ENST00000486234 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
AUP1-208ENST00000486234 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
AUP1-208ENST00000486234 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
AUP1-208ENST00000486234 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
AUP1-208ENST00000486234 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
AUP1-208ENST00000486234 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
AUP1-208ENST00000486234 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
AUP1-208ENST00000486234 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
AUP1-208ENST00000486234 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
AUP1-208ENST00000486234 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
AUP1-208ENST00000486234 CYP27B1O15528 508 aa17.37■□□□□ 0.37
AUP1-208ENST00000486234 PHKG2P15735 406 aa17.37■□□□□ 0.37
AUP1-208ENST00000486234 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
AUP1-208ENST00000486234 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
AUP1-208ENST00000486234 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
AUP1-208ENST00000486234 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
AUP1-208ENST00000486234 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
AUP1-208ENST00000486234 PLEKHF1Q96S99 279 aa17.35■□□□□ 0.37
AUP1-208ENST00000486234 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
AUP1-208ENST00000486234 LRRC37A3O60309 1634 aa17.35■□□□□ 0.37
AUP1-208ENST00000486234 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
AUP1-208ENST00000486234 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
AUP1-208ENST00000486234 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
AUP1-208ENST00000486234 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
AUP1-208ENST00000486234 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
AUP1-208ENST00000486234 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.36
AUP1-208ENST00000486234 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.36
AUP1-208ENST00000486234 ERVV-2B6SEH9 535 aa17.32■□□□□ 0.36
AUP1-208ENST00000486234 SOCS7O14512 581 aa17.32■□□□□ 0.36
AUP1-208ENST00000486234 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
AUP1-208ENST00000486234 UPF1Q92900 1129 aaKnown RBP eCLIP17.32■□□□□ 0.36
AUP1-208ENST00000486234 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
AUP1-208ENST00000486234 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
AUP1-208ENST00000486234 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
AUP1-208ENST00000486234 TRIM37O94972 964 aa17.3■□□□□ 0.36
AUP1-208ENST00000486234 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
AUP1-208ENST00000486234 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
AUP1-208ENST00000486234 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
AUP1-208ENST00000486234 PKD1L3Q7Z443 1732 aa17.29■□□□□ 0.36
AUP1-208ENST00000486234 BAG6P46379 1132 aa17.28■□□□□ 0.36
AUP1-208ENST00000486234 LMOD3Q0VAK6 560 aa17.28■□□□□ 0.36
AUP1-208ENST00000486234 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
AUP1-208ENST00000486234 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
AUP1-208ENST00000486234 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
AUP1-208ENST00000486234 PLSCR1O15162 318 aa17.27■□□□□ 0.36
AUP1-208ENST00000486234 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
AUP1-208ENST00000486234 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
AUP1-208ENST00000486234 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
AUP1-208ENST00000486234 MIER1Q8N108 512 aa17.26■□□□□ 0.35
AUP1-208ENST00000486234 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
AUP1-208ENST00000486234 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
AUP1-208ENST00000486234 KCNQ2O43526 872 aa17.25■□□□□ 0.35
AUP1-208ENST00000486234 APBA3O96018 575 aa17.25■□□□□ 0.35
AUP1-208ENST00000486234 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
AUP1-208ENST00000486234 CABP4P57796 275 aa17.25■□□□□ 0.35
AUP1-208ENST00000486234 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
AUP1-208ENST00000486234 SMARCC1Q92922 1105 aaPredicted RBP17.25■□□□□ 0.35
AUP1-208ENST00000486234 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
AUP1-208ENST00000486234 RIPK4P57078 832 aa17.23■□□□□ 0.35
AUP1-208ENST00000486234 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
AUP1-208ENST00000486234 SLC52A2Q9HAB3 445 aa17.23■□□□□ 0.35
AUP1-208ENST00000486234 TEFQ10587 303 aa17.22■□□□□ 0.35
AUP1-208ENST00000486234 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
AUP1-208ENST00000486234 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
AUP1-208ENST00000486234 PIGBQ92521 554 aa17.22■□□□□ 0.35
AUP1-208ENST00000486234 LGR6Q9HBX8 967 aa17.22■□□□□ 0.35
AUP1-208ENST00000486234 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
AUP1-208ENST00000486234 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
AUP1-208ENST00000486234 APAF1O14727 1248 aa17.2■□□□□ 0.34
AUP1-208ENST00000486234 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
AUP1-208ENST00000486234 SHANK3Q9BYB0 1731 aa17.2■□□□□ 0.34
AUP1-208ENST00000486234 CALD1Q05682 793 aaKnown RBP17.19■□□□□ 0.34
AUP1-208ENST00000486234 SLC27A3Q5K4L6 730 aa17.19■□□□□ 0.34
AUP1-208ENST00000486234 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
AUP1-208ENST00000486234 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
AUP1-208ENST00000486234 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
AUP1-208ENST00000486234 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
AUP1-208ENST00000486234 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
AUP1-208ENST00000486234 MCM10Q7L590 875 aa17.17■□□□□ 0.34
AUP1-208ENST00000486234 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
AUP1-208ENST00000486234 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
AUP1-208ENST00000486234 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
AUP1-208ENST00000486234 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
AUP1-208ENST00000486234 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms