RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RGPD4Q7Z3J3 1758 aa25.28■■□□□ 1.64
PRPF40A-209ENST00000486100 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
PRPF40A-209ENST00000486100 KNSTRNQ9Y448 316 aa25.26■■□□□ 1.63
PRPF40A-209ENST00000486100 KIF7Q2M1P5 1343 aa25.26■■□□□ 1.63
PRPF40A-209ENST00000486100 LRP5O75197 1615 aa25.26■■□□□ 1.63
PRPF40A-209ENST00000486100 NSD2O96028 1365 aa25.25■■□□□ 1.63
PRPF40A-209ENST00000486100 RGPD2P0DJD1 1756 aa25.25■■□□□ 1.63
PRPF40A-209ENST00000486100 NHSQ6T4R5 1651 aa25.24■■□□□ 1.63
PRPF40A-209ENST00000486100 PRIM1P49642 420 aaKnown RBP25.24■■□□□ 1.63
PRPF40A-209ENST00000486100 EYA1Q99502 592 aa25.23■■□□□ 1.63
PRPF40A-209ENST00000486100 MORC1Q86VD1 984 aa25.22■■□□□ 1.63
PRPF40A-209ENST00000486100 SYTL4Q96C24 671 aaPredicted RBP25.22■■□□□ 1.63
PRPF40A-209ENST00000486100 STK32BQ9NY57 414 aa25.22■■□□□ 1.63
PRPF40A-209ENST00000486100 SLC15A2Q16348 729 aa25.2■■□□□ 1.62
PRPF40A-209ENST00000486100 PCDH11XQ9BZA7 1347 aa25.19■■□□□ 1.62
PRPF40A-209ENST00000486100 PCDH11YQ9BZA8 1340 aa25.19■■□□□ 1.62
PRPF40A-209ENST00000486100 EIF4A2Q14240 407 aaKnown RBP25.19■■□□□ 1.62
PRPF40A-209ENST00000486100 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
PRPF40A-209ENST00000486100 SPON1Q9HCB6 807 aa25.18■■□□□ 1.62
PRPF40A-209ENST00000486100 CYP27B1O15528 508 aa25.17■■□□□ 1.62
PRPF40A-209ENST00000486100 AMER1Q5JTC6 1135 aaPredicted RBP25.17■■□□□ 1.62
PRPF40A-209ENST00000486100 LRRC4BQ9NT99 713 aa25.17■■□□□ 1.62
PRPF40A-209ENST00000486100 MAP2P11137 1827 aaKnown RBP25.16■■□□□ 1.62
PRPF40A-209ENST00000486100 SLC27A3Q5K4L6 730 aa25.16■■□□□ 1.62
PRPF40A-209ENST00000486100 ANKRD26Q9UPS8 1709 aa25.16■■□□□ 1.62
PRPF40A-209ENST00000486100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.15■■□□□ 1.62
PRPF40A-209ENST00000486100 SPG7Q9UQ90 795 aa25.15■■□□□ 1.62
PRPF40A-209ENST00000486100 PER1O15534 1290 aaPredicted RBP25.14■■□□□ 1.62
PRPF40A-209ENST00000486100 PDGFDQ9GZP0 370 aaPredicted RBP25.14■■□□□ 1.62
PRPF40A-209ENST00000486100 BTAF1O14981 1849 aa25.14■■□□□ 1.61
PRPF40A-209ENST00000486100 SHANK3Q9BYB0 1731 aa25.13■■□□□ 1.61
PRPF40A-209ENST00000486100 KAT6BQ8WYB5 2073 aa25.12■■□□□ 1.61
PRPF40A-209ENST00000486100 NKX1-1Q15270 411 aaPredicted RBP25.11■■□□□ 1.61
PRPF40A-209ENST00000486100 IGSF1Q8N6C5 1336 aa25.1■■□□□ 1.61
PRPF40A-209ENST00000486100 ZBTB7AO95365 584 aa25.08■■□□□ 1.61
PRPF40A-209ENST00000486100 ZNF827Q17R98 1081 aa25.08■■□□□ 1.61
PRPF40A-209ENST00000486100 AKT1S1Q96B36 256 aa25.08■■□□□ 1.61
PRPF40A-209ENST00000486100 KCNQ4P56696 695 aa25.07■■□□□ 1.6
PRPF40A-209ENST00000486100 MPRIPQ6WCQ1 1025 aa25.07■■□□□ 1.6
PRPF40A-209ENST00000486100 IFNL2Q8IZJ0 200 aa25.07■■□□□ 1.6
PRPF40A-209ENST00000486100 PPP1R1BQ9UD71 204 aaPredicted RBP25.07■■□□□ 1.6
PRPF40A-209ENST00000486100 DOT1LQ8TEK3 1739 aa25.06■■□□□ 1.6
PRPF40A-209ENST00000486100 CCNL1Q9UK58 526 aaPredicted RBP25.06■■□□□ 1.6
PRPF40A-209ENST00000486100 PLEKHG2Q9H7P9 1386 aa25.05■■□□□ 1.6
PRPF40A-209ENST00000486100 PHKG2P15735 406 aa25.05■■□□□ 1.6
PRPF40A-209ENST00000486100 ATF5Q9Y2D1 282 aaPredicted RBP25.05■■□□□ 1.6
PRPF40A-209ENST00000486100 MTFR1LQ9H019 292 aa25.04■■□□□ 1.6
PRPF40A-209ENST00000486100 PAPPAQ13219 1627 aa25.04■■□□□ 1.6
PRPF40A-209ENST00000486100 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
PRPF40A-209ENST00000486100 CASZ1Q86V15 1759 aa25.03■■□□□ 1.6
PRPF40A-209ENST00000486100 IL13P35225 146 aa25.02■■□□□ 1.6
PRPF40A-209ENST00000486100 PTGER2P43116 358 aa25.02■■□□□ 1.6
PRPF40A-209ENST00000486100 MTHFSP49914 203 aa25.02■■□□□ 1.6
PRPF40A-209ENST00000486100 PLEKHO1Q53GL0 409 aaPredicted RBP25.02■■□□□ 1.6
PRPF40A-209ENST00000486100 PIGBQ92521 554 aa25.02■■□□□ 1.6
PRPF40A-209ENST00000486100 PKD1L3Q7Z443 1732 aa25.02■■□□□ 1.6
PRPF40A-209ENST00000486100 HMGB2P26583 209 aaKnown RBP25.01■■□□□ 1.59
PRPF40A-209ENST00000486100 SMARCC1Q92922 1105 aaPredicted RBP25.01■■□□□ 1.59
PRPF40A-209ENST00000486100 TFCP2L1Q9NZI6 479 aa25.01■■□□□ 1.59
PRPF40A-209ENST00000486100 AMOTQ4VCS5 1084 aa25■■□□□ 1.59
PRPF40A-209ENST00000486100 AEBP1Q8IUX7 1158 aa24.99■■□□□ 1.59
PRPF40A-209ENST00000486100 PALLDQ8WX93 1383 aa24.99■■□□□ 1.59
PRPF40A-209ENST00000486100 NPC1L1Q9UHC9 1359 aa24.99■■□□□ 1.59
PRPF40A-209ENST00000486100 SULT6B1Q6IMI4 303 aa24.98■■□□□ 1.59
PRPF40A-209ENST00000486100 SLC16A10Q8TF71 515 aa24.98■■□□□ 1.59
PRPF40A-209ENST00000486100 SGIP1Q9BQI5 828 aa24.97■■□□□ 1.59
PRPF40A-209ENST00000486100 TMOD3Q9NYL9 352 aa24.97■■□□□ 1.59
PRPF40A-209ENST00000486100 PNPLA7Q6ZV29 1317 aa24.96■■□□□ 1.59
PRPF40A-209ENST00000486100 LY75O60449 1722 aa24.96■■□□□ 1.59
PRPF40A-209ENST00000486100 HSP90AB1P08238 724 aaKnown RBP24.96■■□□□ 1.59
PRPF40A-209ENST00000486100 ZNF530Q6P9A1 599 aaPredicted RBP24.94■■□□□ 1.58
PRPF40A-209ENST00000486100 DCAF5Q96JK2 942 aa24.94■■□□□ 1.58
PRPF40A-209ENST00000486100 KDRP35968 1356 aa24.93■■□□□ 1.58
PRPF40A-209ENST00000486100 ERVV-2B6SEH9 535 aa24.93■■□□□ 1.58
PRPF40A-209ENST00000486100 CNGB1Q14028 1251 aaPredicted RBP24.93■■□□□ 1.58
PRPF40A-209ENST00000486100 ASAP1Q9ULH1 1129 aa24.92■■□□□ 1.58
PRPF40A-209ENST00000486100 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
PRPF40A-209ENST00000486100 DIAPH1O60610 1272 aaKnown RBP24.91■■□□□ 1.58
PRPF40A-209ENST00000486100 C1orf141Q5JVX7 400 aa24.9■■□□□ 1.58
PRPF40A-209ENST00000486100 ATG3Q9NT62 314 aa24.9■■□□□ 1.58
PRPF40A-209ENST00000486100 LOC102724428A0A0B4J2F2 783 aa24.89■■□□□ 1.58
PRPF40A-209ENST00000486100 SIK1P57059 783 aa24.89■■□□□ 1.58
PRPF40A-209ENST00000486100 COL23A1Q86Y22 540 aaPredicted RBP24.89■■□□□ 1.58
PRPF40A-209ENST00000486100 ARXQ96QS3 562 aa24.89■■□□□ 1.58
PRPF40A-209ENST00000486100 ITGB4P16144 1822 aa24.87■■□□□ 1.57
PRPF40A-209ENST00000486100 MSH5O43196 834 aa24.87■■□□□ 1.57
PRPF40A-209ENST00000486100 FLAD1Q8NFF5 587 aa24.87■■□□□ 1.57
PRPF40A-209ENST00000486100 FHDC1Q9C0D6 1143 aaPredicted RBP24.87■■□□□ 1.57
PRPF40A-209ENST00000486100 HMOX1P09601 288 aa24.86■■□□□ 1.57
PRPF40A-209ENST00000486100 CABP4P57796 275 aa24.86■■□□□ 1.57
PRPF40A-209ENST00000486100 SYT17Q9BSW7 474 aa24.86■■□□□ 1.57
PRPF40A-209ENST00000486100 DCAF8L1A6NGE4 600 aa24.85■■□□□ 1.57
PRPF40A-209ENST00000486100 POLD1P28340 1107 aa24.85■■□□□ 1.57
PRPF40A-209ENST00000486100 ATP6V1AP38606 617 aa24.84■■□□□ 1.57
PRPF40A-209ENST00000486100 AK7Q96M32 723 aa24.84■■□□□ 1.57
PRPF40A-209ENST00000486100 KDM6AO15550 1401 aaPredicted RBP24.84■■□□□ 1.57
PRPF40A-209ENST00000486100 QSER1Q2KHR3 1735 aa24.83■■□□□ 1.57
PRPF40A-209ENST00000486100 AKAP4Q5JQC9 854 aa24.83■■□□□ 1.57
PRPF40A-209ENST00000486100 ITPK1Q13572 414 aa24.82■■□□□ 1.56
PRPF40A-209ENST00000486100 LINC00116Q8NCU8 138 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms