RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 POLD1P28340 1107 aa27.43■■□□□ 1.98
CHRD-216ENST00000486066 PRIM1P49642 420 aaKnown RBP27.43■■□□□ 1.98
CHRD-216ENST00000486066 CARD11Q9BXL7 1154 aa27.43■■□□□ 1.98
CHRD-216ENST00000486066 TERF2IPQ9NYB0 399 aa27.43■■□□□ 1.98
CHRD-216ENST00000486066 MAP3K19Q56UN5 1328 aa27.42■■□□□ 1.98
CHRD-216ENST00000486066 HOXC9P31274 260 aa27.41■■□□□ 1.98
CHRD-216ENST00000486066 TFCP2L1Q9NZI6 479 aa27.41■■□□□ 1.98
CHRD-216ENST00000486066 C5P01031 1676 aa27.38■■□□□ 1.97
CHRD-216ENST00000486066 YBX3P16989 372 aaKnown RBP eCLIP27.38■■□□□ 1.97
CHRD-216ENST00000486066 TAF1LQ8IZX4 1826 aa27.38■■□□□ 1.97
CHRD-216ENST00000486066 GIGYF1O75420 1035 aaPredicted RBP27.37■■□□□ 1.97
CHRD-216ENST00000486066 LTV1Q96GA3 475 aaPredicted RBP27.37■■□□□ 1.97
CHRD-216ENST00000486066 TESK2Q96S53 571 aa27.37■■□□□ 1.97
CHRD-216ENST00000486066 ZCRB1Q8TBF4 217 aaKnown RBP27.36■■□□□ 1.97
CHRD-216ENST00000486066 RTL1A6NKG5 1358 aa27.35■■□□□ 1.97
CHRD-216ENST00000486066 FBLN1P23142 703 aa27.35■■□□□ 1.97
CHRD-216ENST00000486066 COL23A1Q86Y22 540 aaPredicted RBP27.35■■□□□ 1.97
CHRD-216ENST00000486066 KLHL34Q8N239 644 aa27.35■■□□□ 1.97
CHRD-216ENST00000486066 SYTL4Q96C24 671 aaPredicted RBP27.35■■□□□ 1.97
CHRD-216ENST00000486066 CCNL1Q9UK58 526 aaPredicted RBP27.34■■□□□ 1.97
CHRD-216ENST00000486066 TOGARAM1Q9Y4F4 1720 aa27.32■■□□□ 1.96
CHRD-216ENST00000486066 COG3Q96JB2 828 aa27.31■■□□□ 1.96
CHRD-216ENST00000486066 GRIN3BO60391 1043 aa27.3■■□□□ 1.96
CHRD-216ENST00000486066 NBPF6Q5VWK0 638 aa27.3■■□□□ 1.96
CHRD-216ENST00000486066 NBPF4Q96M43 638 aa27.3■■□□□ 1.96
CHRD-216ENST00000486066 CGNL1Q0VF96 1302 aa27.3■■□□□ 1.96
CHRD-216ENST00000486066 PELP1Q8IZL8 1130 aaKnown RBP27.29■■□□□ 1.96
CHRD-216ENST00000486066 USP47Q96K76 1375 aa27.29■■□□□ 1.96
CHRD-216ENST00000486066 ADCY9O60503 1353 aa27.28■■□□□ 1.96
CHRD-216ENST00000486066 AMPHP49418 695 aa27.27■■□□□ 1.96
CHRD-216ENST00000486066 ITGB4P16144 1822 aa27.26■■□□□ 1.95
CHRD-216ENST00000486066 UBR3Q6ZT12 1888 aa27.25■■□□□ 1.95
CHRD-216ENST00000486066 ATP10DQ9P241 1426 aa27.25■■□□□ 1.95
CHRD-216ENST00000486066 C4BP0C0L5 1744 aa27.24■■□□□ 1.95
CHRD-216ENST00000486066 CD2APQ9Y5K6 639 aa27.24■■□□□ 1.95
CHRD-216ENST00000486066 PKD1L3Q7Z443 1732 aa27.24■■□□□ 1.95
CHRD-216ENST00000486066 MAP2P11137 1827 aaKnown RBP27.23■■□□□ 1.95
CHRD-216ENST00000486066 RRS1Q15050 365 aaKnown RBP27.23■■□□□ 1.95
CHRD-216ENST00000486066 IFFO2Q5TF58 517 aa27.23■■□□□ 1.95
CHRD-216ENST00000486066 ST20-MTHFSA0A0A6YYL1 179 aa27.22■■□□□ 1.95
CHRD-216ENST00000486066 FYB1O15117 783 aa27.22■■□□□ 1.95
CHRD-216ENST00000486066 MSL1Q68DK7 614 aa27.22■■□□□ 1.95
CHRD-216ENST00000486066 USHBP1Q8N6Y0 703 aa27.21■■□□□ 1.95
CHRD-216ENST00000486066 NCAPD2Q15021 1401 aa27.21■■□□□ 1.95
CHRD-216ENST00000486066 AMIGO3Q86WK7 504 aa27.2■■□□□ 1.94
CHRD-216ENST00000486066 KIF20BQ96Q89 1820 aa27.2■■□□□ 1.94
CHRD-216ENST00000486066 INSRP06213 1382 aa27.2■■□□□ 1.94
CHRD-216ENST00000486066 PALLDQ8WX93 1383 aa27.2■■□□□ 1.94
CHRD-216ENST00000486066 CYP27B1O15528 508 aa27.18■■□□□ 1.94
CHRD-216ENST00000486066 FLAD1Q8NFF5 587 aa27.18■■□□□ 1.94
CHRD-216ENST00000486066 KIF24Q5T7B8 1368 aa27.18■■□□□ 1.94
CHRD-216ENST00000486066 PCDH11XQ9BZA7 1347 aa27.17■■□□□ 1.94
CHRD-216ENST00000486066 PCDH11YQ9BZA8 1340 aa27.17■■□□□ 1.94
CHRD-216ENST00000486066 RAPGEF4Q8WZA2 1011 aa27.17■■□□□ 1.94
CHRD-216ENST00000486066 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
CHRD-216ENST00000486066 MSH5O43196 834 aa27.16■■□□□ 1.94
CHRD-216ENST00000486066 TONSLQ96HA7 1378 aa27.16■■□□□ 1.94
CHRD-216ENST00000486066 ANKRD26Q9UPS8 1709 aa27.16■■□□□ 1.94
CHRD-216ENST00000486066 SLC24A1O60721 1099 aa27.15■■□□□ 1.94
CHRD-216ENST00000486066 HSP90AB2PQ58FF8 381 aa27.15■■□□□ 1.94
CHRD-216ENST00000486066 GGNBP2Q9H3C7 697 aa27.15■■□□□ 1.94
CHRD-216ENST00000486066 FLT4P35916 1363 aa27.14■■□□□ 1.94
CHRD-216ENST00000486066 TATP17735 454 aaPredicted RBP27.14■■□□□ 1.94
CHRD-216ENST00000486066 CICQ96RK0 1608 aaPredicted RBP27.13■■□□□ 1.93
CHRD-216ENST00000486066 HMGB2P26583 209 aaKnown RBP27.13■■□□□ 1.93
CHRD-216ENST00000486066 KIAA1551Q9HCM1 1747 aa27.1■■□□□ 1.93
CHRD-216ENST00000486066 NKX1-1Q15270 411 aaPredicted RBP27.1■■□□□ 1.93
CHRD-216ENST00000486066 MPRIPQ6WCQ1 1025 aa27.1■■□□□ 1.93
CHRD-216ENST00000486066 KIF13BQ9NQT8 1826 aa27.09■■□□□ 1.93
CHRD-216ENST00000486066 GPBP1L1Q9HC44 474 aaPredicted RBP27.08■■□□□ 1.93
CHRD-216ENST00000486066 PIGBQ92521 554 aa27.07■■□□□ 1.92
CHRD-216ENST00000486066 SMARCC1Q92922 1105 aaPredicted RBP27.07■■□□□ 1.92
CHRD-216ENST00000486066 NSD3Q9BZ95 1437 aa27.07■■□□□ 1.92
CHRD-216ENST00000486066 HSPA6P17066 643 aa27.06■■□□□ 1.92
CHRD-216ENST00000486066 IGSF1Q8N6C5 1336 aa27.06■■□□□ 1.92
CHRD-216ENST00000486066 SMIM5Q71RC9 77 aa27.05■■□□□ 1.92
CHRD-216ENST00000486066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.04■■□□□ 1.92
CHRD-216ENST00000486066 SSFA2P28290 1259 aa27.04■■□□□ 1.92
CHRD-216ENST00000486066 AK7Q96M32 723 aa27.04■■□□□ 1.92
CHRD-216ENST00000486066 LINC00116Q8NCU8 138 aa27.02■■□□□ 1.92
CHRD-216ENST00000486066 CARD14Q9BXL6 1004 aa27.01■■□□□ 1.91
CHRD-216ENST00000486066 EMILIN1Q9Y6C2 1016 aa27.01■■□□□ 1.91
CHRD-216ENST00000486066 ZNF831Q5JPB2 1677 aa27.01■■□□□ 1.91
CHRD-216ENST00000486066 LOC102724428A0A0B4J2F2 783 aa27■■□□□ 1.91
CHRD-216ENST00000486066 KIF3CO14782 793 aa27■■□□□ 1.91
CHRD-216ENST00000486066 SIK1P57059 783 aa27■■□□□ 1.91
CHRD-216ENST00000486066 TMF1P82094 1093 aa27■■□□□ 1.91
CHRD-216ENST00000486066 PHF14O94880 888 aa26.98■■□□□ 1.91
CHRD-216ENST00000486066 ITPK1Q13572 414 aa26.98■■□□□ 1.91
CHRD-216ENST00000486066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.98■■□□□ 1.91
CHRD-216ENST00000486066 PXDNLA1KZ92 1463 aa26.98■■□□□ 1.91
CHRD-216ENST00000486066 BRCA1P38398 1863 aaKnown RBP26.97■■□□□ 1.91
CHRD-216ENST00000486066 ZNF526Q8TF50 670 aaPredicted RBP26.96■■□□□ 1.91
CHRD-216ENST00000486066 KDRP35968 1356 aa26.96■■□□□ 1.91
CHRD-216ENST00000486066 WASHC2AQ641Q2 1341 aa26.95■■□□□ 1.91
CHRD-216ENST00000486066 COL5A3P25940 1745 aaPredicted RBP26.95■■□□□ 1.9
CHRD-216ENST00000486066 N4BP2Q86UW6 1770 aaPredicted RBP26.94■■□□□ 1.9
CHRD-216ENST00000486066 ASAP1Q9ULH1 1129 aa26.94■■□□□ 1.9
CHRD-216ENST00000486066 WWC3Q9ULE0 1092 aa26.93■■□□□ 1.9
CHRD-216ENST00000486066 SPG7Q9UQ90 795 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms