RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 CCNL1Q9UK58 526 aaPredicted RBP21.86■■□□□ 1.09
PLXNB3-208ENST00000485980 YBX3P16989 372 aaKnown RBP eCLIP21.85■■□□□ 1.09
PLXNB3-208ENST00000485980 EDC4Q6P2E9 1401 aaKnown RBP21.85■■□□□ 1.09
PLXNB3-208ENST00000485980 ANKRD36BQ8N2N9 1353 aa21.85■■□□□ 1.09
PLXNB3-208ENST00000485980 TUBGCP6Q96RT7 1819 aa21.85■■□□□ 1.09
PLXNB3-208ENST00000485980 CEP350Q5VT06 3117 aa21.84■■□□□ 1.09
PLXNB3-208ENST00000485980 CARD11Q9BXL7 1154 aa21.84■■□□□ 1.09
PLXNB3-208ENST00000485980 COL24A1Q17RW2 1714 aa21.83■■□□□ 1.09
PLXNB3-208ENST00000485980 ZCRB1Q8TBF4 217 aaKnown RBP21.83■■□□□ 1.09
PLXNB3-208ENST00000485980 AMPHP49418 695 aa21.82■■□□□ 1.08
PLXNB3-208ENST00000485980 MSL1Q68DK7 614 aa21.82■■□□□ 1.08
PLXNB3-208ENST00000485980 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
PLXNB3-208ENST00000485980 SHANK3Q9BYB0 1731 aa21.82■■□□□ 1.08
PLXNB3-208ENST00000485980 A0A1W2PP64 1363 aa21.81■■□□□ 1.08
PLXNB3-208ENST00000485980 DOT1LQ8TEK3 1739 aa21.8■■□□□ 1.08
PLXNB3-208ENST00000485980 NSD2O96028 1365 aa21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 USP47Q96K76 1375 aa21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 FBLN1P23142 703 aa21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 HOXC9P31274 260 aa21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 COG3Q96JB2 828 aa21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 LY75O60449 1722 aa21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 FAM208AQ9UK61 1670 aaKnown RBP21.79■■□□□ 1.08
PLXNB3-208ENST00000485980 MAP3K19Q56UN5 1328 aa21.78■■□□□ 1.08
PLXNB3-208ENST00000485980 GPBP1L1Q9HC44 474 aaPredicted RBP21.76■■□□□ 1.07
PLXNB3-208ENST00000485980 ATP10DQ9P241 1426 aa21.76■■□□□ 1.07
PLXNB3-208ENST00000485980 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
PLXNB3-208ENST00000485980 ZNF526Q8TF50 670 aaPredicted RBP21.74■■□□□ 1.07
PLXNB3-208ENST00000485980 MEGF6O75095 1541 aa21.74■■□□□ 1.07
PLXNB3-208ENST00000485980 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
PLXNB3-208ENST00000485980 USHBP1Q8N6Y0 703 aa21.73■■□□□ 1.07
PLXNB3-208ENST00000485980 CD2APQ9Y5K6 639 aa21.73■■□□□ 1.07
PLXNB3-208ENST00000485980 NBPF6Q5VWK0 638 aa21.72■■□□□ 1.07
PLXNB3-208ENST00000485980 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
PLXNB3-208ENST00000485980 NBPF4Q96M43 638 aa21.72■■□□□ 1.07
PLXNB3-208ENST00000485980 FLAD1Q8NFF5 587 aa21.71■■□□□ 1.07
PLXNB3-208ENST00000485980 PUS7Q96PZ0 661 aaKnown RBP21.71■■□□□ 1.07
PLXNB3-208ENST00000485980 RRS1Q15050 365 aaKnown RBP21.7■■□□□ 1.06
PLXNB3-208ENST00000485980 TATP17735 454 aaPredicted RBP21.69■■□□□ 1.06
PLXNB3-208ENST00000485980 WWC3Q9ULE0 1092 aa21.69■■□□□ 1.06
PLXNB3-208ENST00000485980 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
PLXNB3-208ENST00000485980 MPRIPQ6WCQ1 1025 aa21.68■■□□□ 1.06
PLXNB3-208ENST00000485980 CGNL1Q0VF96 1302 aa21.68■■□□□ 1.06
PLXNB3-208ENST00000485980 C5P01031 1676 aa21.66■■□□□ 1.06
PLXNB3-208ENST00000485980 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
PLXNB3-208ENST00000485980 HSPA6P17066 643 aa21.66■■□□□ 1.06
PLXNB3-208ENST00000485980 AK7Q96M32 723 aa21.66■■□□□ 1.06
PLXNB3-208ENST00000485980 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
PLXNB3-208ENST00000485980 SMG6Q86US8 1419 aaKnown RBP21.64■■□□□ 1.06
PLXNB3-208ENST00000485980 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
PLXNB3-208ENST00000485980 PCDH11XQ9BZA7 1347 aa21.64■■□□□ 1.05
PLXNB3-208ENST00000485980 PCDH11YQ9BZA8 1340 aa21.64■■□□□ 1.05
PLXNB3-208ENST00000485980 PHF14O94880 888 aa21.64■■□□□ 1.05
PLXNB3-208ENST00000485980 GGNBP2Q9H3C7 697 aa21.64■■□□□ 1.05
PLXNB3-208ENST00000485980 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
PLXNB3-208ENST00000485980 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
PLXNB3-208ENST00000485980 ST20-MTHFSA0A0A6YYL1 179 aa21.62■■□□□ 1.05
PLXNB3-208ENST00000485980 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
PLXNB3-208ENST00000485980 HSP90AB2PQ58FF8 381 aa21.61■■□□□ 1.05
PLXNB3-208ENST00000485980 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
PLXNB3-208ENST00000485980 TESK2Q96S53 571 aa21.61■■□□□ 1.05
PLXNB3-208ENST00000485980 TAF1LQ8IZX4 1826 aa21.61■■□□□ 1.05
PLXNB3-208ENST00000485980 ADCY9O60503 1353 aa21.61■■□□□ 1.05
PLXNB3-208ENST00000485980 FYB1O15117 783 aa21.6■■□□□ 1.05
PLXNB3-208ENST00000485980 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
PLXNB3-208ENST00000485980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
PLXNB3-208ENST00000485980 CYP27B1O15528 508 aa21.59■■□□□ 1.05
PLXNB3-208ENST00000485980 C4BP0C0L5 1744 aa21.58■■□□□ 1.04
PLXNB3-208ENST00000485980 SLC24A1O60721 1099 aa21.57■■□□□ 1.04
PLXNB3-208ENST00000485980 PIGBQ92521 554 aa21.56■■□□□ 1.04
PLXNB3-208ENST00000485980 INSRP06213 1382 aa21.56■■□□□ 1.04
PLXNB3-208ENST00000485980 ITGB4P16144 1822 aa21.55■■□□□ 1.04
PLXNB3-208ENST00000485980 NSD3Q9BZ95 1437 aa21.54■■□□□ 1.04
PLXNB3-208ENST00000485980 FLT4P35916 1363 aa21.53■■□□□ 1.04
PLXNB3-208ENST00000485980 KIF3CO14782 793 aa21.53■■□□□ 1.04
PLXNB3-208ENST00000485980 SSFA2P28290 1259 aa21.53■■□□□ 1.04
PLXNB3-208ENST00000485980 UBR3Q6ZT12 1888 aa21.53■■□□□ 1.04
PLXNB3-208ENST00000485980 LOC102724428A0A0B4J2F2 783 aa21.52■■□□□ 1.04
PLXNB3-208ENST00000485980 SIK1P57059 783 aa21.52■■□□□ 1.04
PLXNB3-208ENST00000485980 LINC00116Q8NCU8 138 aa21.52■■□□□ 1.04
PLXNB3-208ENST00000485980 GNPATO15228 680 aa21.51■■□□□ 1.03
PLXNB3-208ENST00000485980 TOGARAM1Q9Y4F4 1720 aa21.51■■□□□ 1.03
PLXNB3-208ENST00000485980 PPM1GO15355 546 aaPredicted RBP21.5■■□□□ 1.03
PLXNB3-208ENST00000485980 TMF1P82094 1093 aa21.5■■□□□ 1.03
PLXNB3-208ENST00000485980 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
PLXNB3-208ENST00000485980 ATP6V1AP38606 617 aa21.49■■□□□ 1.03
PLXNB3-208ENST00000485980 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
PLXNB3-208ENST00000485980 MMP10P09238 476 aa21.48■■□□□ 1.03
PLXNB3-208ENST00000485980 APLP1P51693 650 aa21.48■■□□□ 1.03
PLXNB3-208ENST00000485980 NKX1-1Q15270 411 aaPredicted RBP21.48■■□□□ 1.03
PLXNB3-208ENST00000485980 ASAP1Q9ULH1 1129 aa21.48■■□□□ 1.03
PLXNB3-208ENST00000485980 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
PLXNB3-208ENST00000485980 TIMELESSQ9UNS1 1208 aa21.47■■□□□ 1.03
PLXNB3-208ENST00000485980 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
PLXNB3-208ENST00000485980 KIF24Q5T7B8 1368 aa21.47■■□□□ 1.03
PLXNB3-208ENST00000485980 ITPK1Q13572 414 aa21.46■■□□□ 1.03
PLXNB3-208ENST00000485980 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
PLXNB3-208ENST00000485980 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
PLXNB3-208ENST00000485980 KIF20BQ96Q89 1820 aa21.44■■□□□ 1.02
PLXNB3-208ENST00000485980 A0A0G2JLW4 131 aa21.44■■□□□ 1.02
PLXNB3-208ENST00000485980 TOMM70O94826 608 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms