RNA–Protein interactions for RNA: ENST00000485941.2

NBPF3-211, Transcript of NBPF member 3, human

TSL 1 (best)

Gene NBPF3, Length 921 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-211	ENST00000485941	QSER1	Q2KHR3	1735 aa		32.71	■■■□□ 2.83
NBPF3-211	ENST00000485941	ZCRB1	Q8TBF4	217 aa	Known RBP	32.7	■■■□□ 2.83
NBPF3-211	ENST00000485941	ARX	Q96QS3	562 aa		32.7	■■■□□ 2.83
NBPF3-211	ENST00000485941	COL24A1	Q17RW2	1714 aa		32.69	■■■□□ 2.82
NBPF3-211	ENST00000485941	RRS1	Q15050	365 aa	Known RBP	32.69	■■■□□ 2.82
NBPF3-211	ENST00000485941	GGNBP2	Q9H3C7	697 aa		32.69	■■■□□ 2.82
NBPF3-211	ENST00000485941	USP47	Q96K76	1375 aa		32.69	■■■□□ 2.82
NBPF3-211	ENST00000485941	LY75	O60449	1722 aa		32.68	■■■□□ 2.82
NBPF3-211	ENST00000485941	DOT1L	Q8TEK3	1739 aa		32.68	■■■□□ 2.82
NBPF3-211	ENST00000485941	TMF1	P82094	1093 aa		32.67	■■■□□ 2.82
NBPF3-211	ENST00000485941	PNPLA7	Q6ZV29	1317 aa		32.66	■■■□□ 2.82
NBPF3-211	ENST00000485941	KCNQ4	P56696	695 aa		32.65	■■■□□ 2.82
NBPF3-211	ENST00000485941	SLC16A10	Q8TF71	515 aa		32.65	■■■□□ 2.82
NBPF3-211	ENST00000485941	TUBGCP6	Q96RT7	1819 aa		32.63	■■■□□ 2.81
NBPF3-211	ENST00000485941	CGNL1	Q0VF96	1302 aa		32.61	■■■□□ 2.81
NBPF3-211	ENST00000485941	SYTL4	Q96C24	671 aa	Predicted RBP	32.61	■■■□□ 2.81
NBPF3-211	ENST00000485941	INSR	P06213	1382 aa		32.6	■■■□□ 2.81
NBPF3-211	ENST00000485941	HSP90AB2P	Q58FF8	381 aa		32.6	■■■□□ 2.81
NBPF3-211	ENST00000485941	USHBP1	Q8N6Y0	703 aa		32.6	■■■□□ 2.81
NBPF3-211	ENST00000485941	CARD14	Q9BXL6	1004 aa		32.59	■■■□□ 2.81
NBPF3-211	ENST00000485941	KIF24	Q5T7B8	1368 aa		32.58	■■■□□ 2.81
NBPF3-211	ENST00000485941	TRIM26	Q12899	539 aa	Predicted RBP	32.56	■■■□□ 2.8
NBPF3-211	ENST00000485941	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.56	■■■□□ 2.8
NBPF3-211	ENST00000485941	TFCP2L1	Q9NZI6	479 aa		32.55	■■■□□ 2.8
NBPF3-211	ENST00000485941	FLT4	P35916	1363 aa		32.55	■■■□□ 2.8
NBPF3-211	ENST00000485941	KIF20B	Q96Q89	1820 aa		32.54	■■■□□ 2.8
NBPF3-211	ENST00000485941	CDCA8	Q53HL2	280 aa		32.53	■■■□□ 2.8
NBPF3-211	ENST00000485941	SMG6	Q86US8	1419 aa	Known RBP	32.52	■■■□□ 2.8
NBPF3-211	ENST00000485941	RAPGEF4	Q8WZA2	1011 aa		32.52	■■■□□ 2.8
NBPF3-211	ENST00000485941	CCNL1	Q9UK58	526 aa	Predicted RBP	32.52	■■■□□ 2.8
NBPF3-211	ENST00000485941	GOLGB1	Q14789	3259 aa	Known RBP	32.52	■■■□□ 2.8
NBPF3-211	ENST00000485941	NCAPD2	Q15021	1401 aa		32.51	■■■□□ 2.8
NBPF3-211	ENST00000485941	CHD4	Q14839	1912 aa		32.5	■■■□□ 2.79
NBPF3-211	ENST00000485941	TAT	P17735	454 aa	Predicted RBP	32.5	■■■□□ 2.79
NBPF3-211	ENST00000485941	CYP27B1	O15528	508 aa		32.49	■■■□□ 2.79
NBPF3-211	ENST00000485941	POLD1	P28340	1107 aa		32.47	■■■□□ 2.79
NBPF3-211	ENST00000485941	COL23A1	Q86Y22	540 aa	Predicted RBP	32.47	■■■□□ 2.79
NBPF3-211	ENST00000485941	EMILIN1	Q9Y6C2	1016 aa		32.47	■■■□□ 2.79
NBPF3-211	ENST00000485941	PCDH11X	Q9BZA7	1347 aa		32.47	■■■□□ 2.79
NBPF3-211	ENST00000485941	PCDH11Y	Q9BZA8	1340 aa		32.47	■■■□□ 2.79
NBPF3-211	ENST00000485941	NSD3	Q9BZ95	1437 aa		32.46	■■■□□ 2.79
NBPF3-211	ENST00000485941	ANKRD26	Q9UPS8	1709 aa		32.43	■■■□□ 2.78
NBPF3-211	ENST00000485941	TOGARAM1	Q9Y4F4	1720 aa		32.43	■■■□□ 2.78
NBPF3-211	ENST00000485941	TIMELESS	Q9UNS1	1208 aa		32.43	■■■□□ 2.78
NBPF3-211	ENST00000485941	PKD1L3	Q7Z443	1732 aa		32.43	■■■□□ 2.78
NBPF3-211	ENST00000485941	NLGN2	Q8NFZ4	835 aa		32.42	■■■□□ 2.78
NBPF3-211	ENST00000485941	NKX1-1	Q15270	411 aa	Predicted RBP	32.4	■■■□□ 2.78
NBPF3-211	ENST00000485941	C5	P01031	1676 aa		32.4	■■■□□ 2.78
NBPF3-211	ENST00000485941	GPR162	Q16538	588 aa		32.39	■■■□□ 2.78
NBPF3-211	ENST00000485941	WASHC2A	Q641Q2	1341 aa		32.39	■■■□□ 2.78
NBPF3-211	ENST00000485941	PALLD	Q8WX93	1383 aa		32.39	■■■□□ 2.78
NBPF3-211	ENST00000485941	TAF1L	Q8IZX4	1826 aa		32.38	■■■□□ 2.77
NBPF3-211	ENST00000485941	ITGB4	P16144	1822 aa		32.36	■■■□□ 2.77
NBPF3-211	ENST00000485941	MPRIP	Q6WCQ1	1025 aa		32.36	■■■□□ 2.77
NBPF3-211	ENST00000485941	KLHL34	Q8N239	644 aa		32.35	■■■□□ 2.77
NBPF3-211	ENST00000485941	AMIGO3	Q86WK7	504 aa		32.33	■■■□□ 2.77
NBPF3-211	ENST00000485941	PIGB	Q92521	554 aa		32.33	■■■□□ 2.77
NBPF3-211	ENST00000485941	EYA1	Q99502	592 aa		32.33	■■■□□ 2.77
NBPF3-211	ENST00000485941	POLK	Q9UBT6	870 aa		32.33	■■■□□ 2.77
NBPF3-211	ENST00000485941	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
NBPF3-211	ENST00000485941	MAP2	P11137	1827 aa	Known RBP	32.3	■■■□□ 2.76
NBPF3-211	ENST00000485941	C4B	P0C0L5	1744 aa		32.3	■■■□□ 2.76
NBPF3-211	ENST00000485941	YBX3	P16989	372 aa	Known RBP eCLIP	32.3	■■■□□ 2.76
NBPF3-211	ENST00000485941	MSL1	Q68DK7	614 aa		32.3	■■■□□ 2.76
NBPF3-211	ENST00000485941	SMARCC1	Q92922	1105 aa	Predicted RBP	32.3	■■■□□ 2.76
NBPF3-211	ENST00000485941	MSH5	O43196	834 aa		32.29	■■■□□ 2.76
NBPF3-211	ENST00000485941	FLAD1	Q8NFF5	587 aa		32.29	■■■□□ 2.76
NBPF3-211	ENST00000485941	CLSPN	Q9HAW4	1339 aa		32.28	■■■□□ 2.76
NBPF3-211	ENST00000485941	HMGB2	P26583	209 aa	Known RBP	32.28	■■■□□ 2.76
NBPF3-211	ENST00000485941	PPM1G	O15355	546 aa	Predicted RBP	32.27	■■■□□ 2.76
NBPF3-211	ENST00000485941	SPG7	Q9UQ90	795 aa		32.26	■■■□□ 2.75
NBPF3-211	ENST00000485941	UBR3	Q6ZT12	1888 aa		32.25	■■■□□ 2.75
NBPF3-211	ENST00000485941	C1QTNF8	P60827	252 aa		32.24	■■■□□ 2.75
NBPF3-211	ENST00000485941	CD2AP	Q9Y5K6	639 aa		32.24	■■■□□ 2.75
NBPF3-211	ENST00000485941	PELP1	Q8IZL8	1130 aa	Known RBP	32.23	■■■□□ 2.75
NBPF3-211	ENST00000485941	PHKG2	P15735	406 aa		32.22	■■■□□ 2.75
NBPF3-211	ENST00000485941	EIF4A2	Q14240	407 aa	Known RBP	32.22	■■■□□ 2.75
NBPF3-211	ENST00000485941	SMIM5	Q71RC9	77 aa		32.22	■■■□□ 2.75
NBPF3-211	ENST00000485941	LINC00116	Q8NCU8	138 aa		32.21	■■■□□ 2.75
NBPF3-211	ENST00000485941	PLEKHG2	Q9H7P9	1386 aa		32.2	■■■□□ 2.75
NBPF3-211	ENST00000485941	LOC102724428	A0A0B4J2F2	783 aa		32.2	■■■□□ 2.75
NBPF3-211	ENST00000485941	GRIN3B	O60391	1043 aa		32.2	■■■□□ 2.75
NBPF3-211	ENST00000485941	SIK1	P57059	783 aa		32.2	■■■□□ 2.75
NBPF3-211	ENST00000485941	AK7	Q96M32	723 aa		32.19	■■■□□ 2.74
NBPF3-211	ENST00000485941	ASAP1	Q9ULH1	1129 aa		32.19	■■■□□ 2.74
NBPF3-211	ENST00000485941	ITPK1	Q13572	414 aa		32.18	■■■□□ 2.74
NBPF3-211	ENST00000485941	IFNL2	Q8IZJ0	200 aa		32.18	■■■□□ 2.74
NBPF3-211	ENST00000485941	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.17	■■■□□ 2.74
NBPF3-211	ENST00000485941	IGSF1	Q8N6C5	1336 aa		32.16	■■■□□ 2.74
NBPF3-211	ENST00000485941	SSFA2	P28290	1259 aa		32.15	■■■□□ 2.74
NBPF3-211	ENST00000485941	ATG3	Q9NT62	314 aa		32.15	■■■□□ 2.74
NBPF3-211	ENST00000485941	TMOD3	Q9NYL9	352 aa		32.15	■■■□□ 2.74
NBPF3-211	ENST00000485941	KDR	P35968	1356 aa		32.11	■■■□□ 2.73
NBPF3-211	ENST00000485941	PHF14	O94880	888 aa		32.11	■■■□□ 2.73
NBPF3-211	ENST00000485941	TNNT2	P45379	298 aa	Predicted RBP	32.11	■■■□□ 2.73
NBPF3-211	ENST00000485941	SLC4A9	Q96Q91	983 aa		32.1	■■■□□ 2.73
NBPF3-211	ENST00000485941	HSPA5	P11021	654 aa	Known RBP	32.09	■■■□□ 2.73
NBPF3-211	ENST00000485941	PANK3	Q9H999	370 aa		32.09	■■■□□ 2.73
NBPF3-211	ENST00000485941	ATP6V1A	P38606	617 aa		32.08	■■■□□ 2.73
NBPF3-211	ENST00000485941	PCGF6	Q9BYE7	350 aa		32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms