RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MAPK8IP3Q9UPT6 1336 aa14.93□□□□□ -0.02
SND1-212ENST00000485871 ATRNO75882 1429 aa14.93□□□□□ -0.02
SND1-212ENST00000485871 CRB1P82279 1406 aa14.93□□□□□ -0.02
SND1-212ENST00000485871 LRRC37A3O60309 1634 aa14.93□□□□□ -0.02
SND1-212ENST00000485871 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
SND1-212ENST00000485871 NFE2L2Q16236 605 aa14.93□□□□□ -0.02
SND1-212ENST00000485871 RRP7AQ9Y3A4 280 aaKnown RBP14.93□□□□□ -0.02
SND1-212ENST00000485871 ADAMTS7Q9UKP4 1686 aa14.93□□□□□ -0.02
SND1-212ENST00000485871 BTG4Q9NY30 223 aa14.92□□□□□ -0.02
SND1-212ENST00000485871 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
SND1-212ENST00000485871 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
SND1-212ENST00000485871 GJD4Q96KN9 370 aaPredicted RBP14.91□□□□□ -0.02
SND1-212ENST00000485871 SALL2Q9Y467 1007 aaPredicted RBP14.91□□□□□ -0.02
SND1-212ENST00000485871 BCL9LQ86UU0 1499 aa14.9□□□□□ -0.02
SND1-212ENST00000485871 CSB-PGBD3P0DP91 1061 aa14.9□□□□□ -0.02
SND1-212ENST00000485871 MTHFSDQ2M296 383 aaKnown RBP14.9□□□□□ -0.02
SND1-212ENST00000485871 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
SND1-212ENST00000485871 CARD10Q9BWT7 1032 aa14.9□□□□□ -0.02
SND1-212ENST00000485871 NLRP2Q9NX02 1062 aa14.9□□□□□ -0.02
SND1-212ENST00000485871 DISP2A7MBM2 1401 aa14.9□□□□□ -0.02
SND1-212ENST00000485871 DEFB132Q7Z7B7 95 aa14.89□□□□□ -0.03
SND1-212ENST00000485871 STRN4Q9NRL3 753 aa14.89□□□□□ -0.03
SND1-212ENST00000485871 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
SND1-212ENST00000485871 SCN11AQ9UI33 1791 aa14.88□□□□□ -0.03
SND1-212ENST00000485871 NEFMP07197 916 aa14.88□□□□□ -0.03
SND1-212ENST00000485871 RIPK4P57078 832 aa14.88□□□□□ -0.03
SND1-212ENST00000485871 NEUROD2Q15784 382 aa14.88□□□□□ -0.03
SND1-212ENST00000485871 TOM1L2Q6ZVM7 507 aa14.88□□□□□ -0.03
SND1-212ENST00000485871 EP400Q96L91 3159 aa14.87□□□□□ -0.03
SND1-212ENST00000485871 EVA1CP58658 441 aa14.87□□□□□ -0.03
SND1-212ENST00000485871 PDE3BQ13370 1112 aa14.87□□□□□ -0.03
SND1-212ENST00000485871 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
SND1-212ENST00000485871 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
SND1-212ENST00000485871 SIPA1L3O60292 1781 aaPredicted RBP14.87□□□□□ -0.03
SND1-212ENST00000485871 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
SND1-212ENST00000485871 TRMT2AQ8IZ69 625 aaKnown RBP14.86□□□□□ -0.03
SND1-212ENST00000485871 SPINK5Q9NQ38 1064 aaPredicted RBP14.86□□□□□ -0.03
SND1-212ENST00000485871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.03
SND1-212ENST00000485871 SPATA31A1Q5TZJ5 1347 aa14.85□□□□□ -0.03
SND1-212ENST00000485871 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
SND1-212ENST00000485871 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
SND1-212ENST00000485871 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 SLFN5Q08AF3 891 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
SND1-212ENST00000485871 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 RAPGEF4Q8WZA2 1011 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 SPATA31A5Q5VU36 1347 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 SPATA31A7Q8IWB4 1347 aa14.84□□□□□ -0.03
SND1-212ENST00000485871 GLI3P10071 1580 aa14.83□□□□□ -0.04
SND1-212ENST00000485871 LMOD3Q0VAK6 560 aa14.83□□□□□ -0.04
SND1-212ENST00000485871 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
SND1-212ENST00000485871 IL16Q14005 1332 aa14.83□□□□□ -0.04
SND1-212ENST00000485871 THSD7AQ9UPZ6 1657 aa14.82□□□□□ -0.04
SND1-212ENST00000485871 PSDA5PKW4 1024 aaPredicted RBP14.82□□□□□ -0.04
SND1-212ENST00000485871 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
SND1-212ENST00000485871 IL2RBP14784 551 aa14.82□□□□□ -0.04
SND1-212ENST00000485871 THUMPD2Q9BTF0 503 aaKnown RBP14.82□□□□□ -0.04
SND1-212ENST00000485871 TOGARAM1Q9Y4F4 1720 aa14.82□□□□□ -0.04
SND1-212ENST00000485871 CEMIPQ8WUJ3 1361 aa14.82□□□□□ -0.04
SND1-212ENST00000485871 KDM3BQ7LBC6 1761 aa14.81□□□□□ -0.04
SND1-212ENST00000485871 GNAT3A8MTJ3 354 aa14.81□□□□□ -0.04
SND1-212ENST00000485871 DCTN1Q14203 1278 aa14.81□□□□□ -0.04
SND1-212ENST00000485871 VPS72Q15906 364 aa14.81□□□□□ -0.04
SND1-212ENST00000485871 KDM6AO15550 1401 aaPredicted RBP14.81□□□□□ -0.04
SND1-212ENST00000485871 MRC1P22897 1456 aa14.81□□□□□ -0.04
SND1-212ENST00000485871 E9PSI1 815 aa14.8□□□□□ -0.04
SND1-212ENST00000485871 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
SND1-212ENST00000485871 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
SND1-212ENST00000485871 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
SND1-212ENST00000485871 SEPT12Q8IYM1 358 aa14.8□□□□□ -0.04
SND1-212ENST00000485871 IL17REQ8NFR9 667 aa14.8□□□□□ -0.04
SND1-212ENST00000485871 THRAP3Q9Y2W1 955 aaKnown RBP14.8□□□□□ -0.04
SND1-212ENST00000485871 CYP27B1O15528 508 aa14.79□□□□□ -0.04
SND1-212ENST00000485871 TNS2Q63HR2 1409 aa14.79□□□□□ -0.04
SND1-212ENST00000485871 BARGINQ6ZT62 677 aa14.79□□□□□ -0.04
SND1-212ENST00000485871 MCM10Q7L590 875 aa14.79□□□□□ -0.04
SND1-212ENST00000485871 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
SND1-212ENST00000485871 LRP5O75197 1615 aa14.78□□□□□ -0.04
SND1-212ENST00000485871 PHKG2P15735 406 aa14.78□□□□□ -0.04
SND1-212ENST00000485871 BAG6P46379 1132 aa14.78□□□□□ -0.04
SND1-212ENST00000485871 USP35Q9P2H5 1018 aa14.78□□□□□ -0.04
SND1-212ENST00000485871 CCDC9Q9Y3X0 531 aaKnown RBP14.78□□□□□ -0.04
SND1-212ENST00000485871 ZCRB1Q8TBF4 217 aaKnown RBP14.77□□□□□ -0.05
SND1-212ENST00000485871 ITGB4P16144 1822 aa14.77□□□□□ -0.05
SND1-212ENST00000485871 PCDH11XQ9BZA7 1347 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 PCDH11YQ9BZA8 1340 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 RNMTO43148 476 aaKnown RBP14.76□□□□□ -0.05
SND1-212ENST00000485871 NEFLP07196 543 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 CALD1Q05682 793 aaKnown RBP14.76□□□□□ -0.05
SND1-212ENST00000485871 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
SND1-212ENST00000485871 C1orf141Q5JVX7 400 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 KRT27Q7Z3Y8 459 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 IFNL2Q8IZJ0 200 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
SND1-212ENST00000485871 LGR6Q9HBX8 967 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 IFT57Q9NWB7 429 aa14.76□□□□□ -0.05
SND1-212ENST00000485871 PAPPAQ13219 1627 aa14.75□□□□□ -0.05
SND1-212ENST00000485871 A0A0G2JS52 829 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms