RNA–Protein interactions for RNA: ENST00000485835.1

PSMD3-203, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 2,888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-203ENST00000485835 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
PSMD3-203ENST00000485835 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
PSMD3-203ENST00000485835 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
PSMD3-203ENST00000485835 ERBB3P21860 1342 aa12.76□□□□□ -0.37
PSMD3-203ENST00000485835 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
PSMD3-203ENST00000485835 TEX35Q5T0J7 233 aa12.76□□□□□ -0.37
PSMD3-203ENST00000485835 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
PSMD3-203ENST00000485835 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
PSMD3-203ENST00000485835 TRIM66O15016 1216 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 MX1P20591 662 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 PTGS1P23219 599 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 KRBA2Q6ZNG9 492 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 RUNDC1Q96C34 613 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 GCC1Q96CN9 775 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 TCHHQ07283 1943 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 CDC42BPAQ5VT25 1732 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 MED14O60244 1454 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 GOLGA6L1Q8N7Z2 621 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 SPC24Q8NBT2 197 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
PSMD3-203ENST00000485835 ADGRB2O60241 1585 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 H2AFXP16104 143 aaPredicted RBP12.75□□□□□ -0.37
PSMD3-203ENST00000485835 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 EP400NLQ6ZTU2 488 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 CWC15Q9P013 229 aaKnown RBP12.75□□□□□ -0.37
PSMD3-203ENST00000485835 LCMT1Q9UIC8 334 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 NOS1P29475 1434 aa12.75□□□□□ -0.37
PSMD3-203ENST00000485835 ATAD2Q6PL18 1390 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 ELF2Q15723 593 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
PSMD3-203ENST00000485835 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 SRLQ86TD4 932 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
PSMD3-203ENST00000485835 JRKLQ9Y4A0 524 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 A0A1B0GUL7 405 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
PSMD3-203ENST00000485835 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
PSMD3-203ENST00000485835 TPM4P67936 248 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
PSMD3-203ENST00000485835 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 DONSONQ9NYP3 566 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
PSMD3-203ENST00000485835 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
PSMD3-203ENST00000485835 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 RTF1Q92541 710 aaKnown RBP12.73□□□□□ -0.37
PSMD3-203ENST00000485835 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
PSMD3-203ENST00000485835 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
PSMD3-203ENST00000485835 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
PSMD3-203ENST00000485835 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
PSMD3-203ENST00000485835 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
PSMD3-203ENST00000485835 SATB1Q01826 763 aa12.72□□□□□ -0.37
PSMD3-203ENST00000485835 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
PSMD3-203ENST00000485835 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
PSMD3-203ENST00000485835 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
PSMD3-203ENST00000485835 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
PSMD3-203ENST00000485835 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
PSMD3-203ENST00000485835 CUL4AQ13619 759 aa12.71□□□□□ -0.37
PSMD3-203ENST00000485835 EGFL6Q8IUX8 553 aa12.71□□□□□ -0.37
PSMD3-203ENST00000485835 RRP7AQ9Y3A4 280 aaKnown RBP12.71□□□□□ -0.37
PSMD3-203ENST00000485835 RRP15Q9Y3B9 282 aaKnown RBP12.71□□□□□ -0.37
PSMD3-203ENST00000485835 ADGRL1O94910 1474 aa12.71□□□□□ -0.37
PSMD3-203ENST00000485835 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.37
PSMD3-203ENST00000485835 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
PSMD3-203ENST00000485835 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.38
PSMD3-203ENST00000485835 KIF1CO43896 1103 aaKnown RBP12.71□□□□□ -0.38
PSMD3-203ENST00000485835 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.38
PSMD3-203ENST00000485835 IQUBQ8NA54 791 aa12.71□□□□□ -0.38
PSMD3-203ENST00000485835 PATL2C9JE40 543 aaKnown RBP12.7□□□□□ -0.38
PSMD3-203ENST00000485835 SLU7O95391 586 aaKnown RBP12.7□□□□□ -0.38
PSMD3-203ENST00000485835 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 ZSCAN25Q6NSZ9 544 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 GPATCH11Q8N954 259 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 GOLGA5Q8TBA6 731 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 TOMM22Q9NS69 142 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
PSMD3-203ENST00000485835 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
PSMD3-203ENST00000485835 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 LRMPQ12912 555 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 GPS2Q13227 327 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 NOM1Q5C9Z4 860 aaKnown RBP12.7□□□□□ -0.38
PSMD3-203ENST00000485835 FBXO18Q8NFZ0 1043 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
PSMD3-203ENST00000485835 GSCP56915 257 aaPredicted RBP12.69□□□□□ -0.38
PSMD3-203ENST00000485835 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
PSMD3-203ENST00000485835 SMARCE1Q969G3 411 aa12.69□□□□□ -0.38
PSMD3-203ENST00000485835 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
PSMD3-203ENST00000485835 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
PSMD3-203ENST00000485835 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
PSMD3-203ENST00000485835 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
PSMD3-203ENST00000485835 MCM2P49736 904 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms