RNA–Protein interactions for RNA: ENST00000485692.1

GTF3C5-209, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-209ENST00000485692 SHANK3Q9BYB0 1731 aa29■■■□□ 2.23
GTF3C5-209ENST00000485692 RAPGEF4Q8WZA2 1011 aa28.99■■■□□ 2.23
GTF3C5-209ENST00000485692 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
GTF3C5-209ENST00000485692 PAPPAQ13219 1627 aa28.98■■■□□ 2.23
GTF3C5-209ENST00000485692 EIF4G2P78344 907 aaKnown RBP eCLIP28.98■■■□□ 2.23
GTF3C5-209ENST00000485692 USHBP1Q8N6Y0 703 aa28.98■■■□□ 2.23
GTF3C5-209ENST00000485692 DOT1LQ8TEK3 1739 aa28.97■■■□□ 2.23
GTF3C5-209ENST00000485692 ZBTB7AO95365 584 aa28.96■■■□□ 2.23
GTF3C5-209ENST00000485692 SYTL4Q96C24 671 aaPredicted RBP28.96■■■□□ 2.23
GTF3C5-209ENST00000485692 TATP17735 454 aaPredicted RBP28.95■■■□□ 2.22
GTF3C5-209ENST00000485692 PRIM1P49642 420 aaKnown RBP28.95■■■□□ 2.22
GTF3C5-209ENST00000485692 SLC27A3Q5K4L6 730 aa28.95■■■□□ 2.22
GTF3C5-209ENST00000485692 POLR3GLQ9BT43 218 aa28.95■■■□□ 2.22
GTF3C5-209ENST00000485692 EMILIN1Q9Y6C2 1016 aa28.95■■■□□ 2.22
GTF3C5-209ENST00000485692 LRRC4BQ9NT99 713 aa28.93■■■□□ 2.22
GTF3C5-209ENST00000485692 ANKRD26Q9UPS8 1709 aa28.92■■■□□ 2.22
GTF3C5-209ENST00000485692 HSPA5P11021 654 aaKnown RBP28.92■■■□□ 2.22
GTF3C5-209ENST00000485692 MTFR1LQ9H019 292 aa28.91■■■□□ 2.22
GTF3C5-209ENST00000485692 NSD2O96028 1365 aa28.9■■■□□ 2.22
GTF3C5-209ENST00000485692 PPM1GO15355 546 aaPredicted RBP28.9■■■□□ 2.22
GTF3C5-209ENST00000485692 ATF5Q9Y2D1 282 aaPredicted RBP28.9■■■□□ 2.22
GTF3C5-209ENST00000485692 PCDH11XQ9BZA7 1347 aa28.9■■■□□ 2.22
GTF3C5-209ENST00000485692 PCDH11YQ9BZA8 1340 aa28.9■■■□□ 2.22
GTF3C5-209ENST00000485692 PTGER2P43116 358 aa28.89■■■□□ 2.22
GTF3C5-209ENST00000485692 ZNF827Q17R98 1081 aa28.88■■■□□ 2.21
GTF3C5-209ENST00000485692 WASHC2AQ641Q2 1341 aa28.88■■■□□ 2.21
GTF3C5-209ENST00000485692 MAP2P11137 1827 aaKnown RBP28.86■■■□□ 2.21
GTF3C5-209ENST00000485692 LY75O60449 1722 aa28.86■■■□□ 2.21
GTF3C5-209ENST00000485692 NCAPD2Q15021 1401 aa28.86■■■□□ 2.21
GTF3C5-209ENST00000485692 DCAF8L1A6NGE4 600 aa28.85■■■□□ 2.21
GTF3C5-209ENST00000485692 AKT1S1Q96B36 256 aa28.85■■■□□ 2.21
GTF3C5-209ENST00000485692 POLKQ9UBT6 870 aa28.83■■■□□ 2.21
GTF3C5-209ENST00000485692 QSER1Q2KHR3 1735 aa28.82■■■□□ 2.2
GTF3C5-209ENST00000485692 PKD1L3Q7Z443 1732 aa28.81■■■□□ 2.2
GTF3C5-209ENST00000485692 SGIP1Q9BQI5 828 aa28.81■■■□□ 2.2
GTF3C5-209ENST00000485692 PANK3Q9H999 370 aa28.81■■■□□ 2.2
GTF3C5-209ENST00000485692 CCNL1Q9UK58 526 aaPredicted RBP28.8■■■□□ 2.2
GTF3C5-209ENST00000485692 CYP27B1O15528 508 aa28.79■■■□□ 2.2
GTF3C5-209ENST00000485692 KCNQ4P56696 695 aa28.79■■■□□ 2.2
GTF3C5-209ENST00000485692 TFCP2L1Q9NZI6 479 aa28.79■■■□□ 2.2
GTF3C5-209ENST00000485692 TNNT2P45379 298 aaPredicted RBP28.78■■■□□ 2.2
GTF3C5-209ENST00000485692 SLC16A10Q8TF71 515 aa28.78■■■□□ 2.2
GTF3C5-209ENST00000485692 EYA1Q99502 592 aa28.78■■■□□ 2.2
GTF3C5-209ENST00000485692 SPG7Q9UQ90 795 aa28.78■■■□□ 2.2
GTF3C5-209ENST00000485692 PNPLA7Q6ZV29 1317 aa28.75■■■□□ 2.19
GTF3C5-209ENST00000485692 ARXQ96QS3 562 aa28.75■■■□□ 2.19
GTF3C5-209ENST00000485692 FHDC1Q9C0D6 1143 aaPredicted RBP28.75■■■□□ 2.19
GTF3C5-209ENST00000485692 HMGB2P26583 209 aaKnown RBP28.74■■■□□ 2.19
GTF3C5-209ENST00000485692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.74■■■□□ 2.19
GTF3C5-209ENST00000485692 MPRIPQ6WCQ1 1025 aa28.73■■■□□ 2.19
GTF3C5-209ENST00000485692 SYT17Q9BSW7 474 aa28.73■■■□□ 2.19
GTF3C5-209ENST00000485692 TUBGCP6Q96RT7 1819 aa28.73■■■□□ 2.19
GTF3C5-209ENST00000485692 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
GTF3C5-209ENST00000485692 EIF4A2Q14240 407 aaKnown RBP28.72■■■□□ 2.19
GTF3C5-209ENST00000485692 NKX1-1Q15270 411 aaPredicted RBP28.72■■■□□ 2.19
GTF3C5-209ENST00000485692 PALLDQ8WX93 1383 aa28.71■■■□□ 2.19
GTF3C5-209ENST00000485692 ITGB4P16144 1822 aa28.7■■■□□ 2.18
GTF3C5-209ENST00000485692 PLEKHG2Q9H7P9 1386 aa28.7■■■□□ 2.18
GTF3C5-209ENST00000485692 YY1P25490 414 aa28.69■■■□□ 2.18
GTF3C5-209ENST00000485692 SMARCC1Q92922 1105 aaPredicted RBP28.69■■■□□ 2.18
GTF3C5-209ENST00000485692 MAP3K5Q99683 1374 aa28.69■■■□□ 2.18
GTF3C5-209ENST00000485692 C5P01031 1676 aa28.68■■■□□ 2.18
GTF3C5-209ENST00000485692 POLD1P28340 1107 aa28.68■■■□□ 2.18
GTF3C5-209ENST00000485692 COL24A1Q17RW2 1714 aa28.67■■■□□ 2.18
GTF3C5-209ENST00000485692 MORC1Q86VD1 984 aa28.67■■■□□ 2.18
GTF3C5-209ENST00000485692 KNSTRNQ9Y448 316 aa28.67■■■□□ 2.18
GTF3C5-209ENST00000485692 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
GTF3C5-209ENST00000485692 IGSF1Q8N6C5 1336 aa28.66■■■□□ 2.18
GTF3C5-209ENST00000485692 PIGBQ92521 554 aa28.65■■■□□ 2.18
GTF3C5-209ENST00000485692 PHKG2P15735 406 aa28.64■■■□□ 2.18
GTF3C5-209ENST00000485692 TAF1LQ8IZX4 1826 aa28.62■■■□□ 2.17
GTF3C5-209ENST00000485692 MSH5O43196 834 aa28.62■■■□□ 2.17
GTF3C5-209ENST00000485692 TMOD3Q9NYL9 352 aa28.62■■■□□ 2.17
GTF3C5-209ENST00000485692 COL23A1Q86Y22 540 aaPredicted RBP28.61■■■□□ 2.17
GTF3C5-209ENST00000485692 KIF7Q2M1P5 1343 aa28.61■■■□□ 2.17
GTF3C5-209ENST00000485692 FLAD1Q8NFF5 587 aa28.6■■■□□ 2.17
GTF3C5-209ENST00000485692 UTRNP46939 3433 aa28.6■■■□□ 2.17
GTF3C5-209ENST00000485692 C4BP0C0L5 1744 aa28.57■■■□□ 2.16
GTF3C5-209ENST00000485692 AMER1Q5JTC6 1135 aaPredicted RBP28.56■■■□□ 2.16
GTF3C5-209ENST00000485692 AK7Q96M32 723 aa28.56■■■□□ 2.16
GTF3C5-209ENST00000485692 LOC102724428A0A0B4J2F2 783 aa28.55■■■□□ 2.16
GTF3C5-209ENST00000485692 HSP90AB1P08238 724 aaKnown RBP28.55■■■□□ 2.16
GTF3C5-209ENST00000485692 SIK1P57059 783 aa28.55■■■□□ 2.16
GTF3C5-209ENST00000485692 PLEKHO1Q53GL0 409 aaPredicted RBP28.55■■■□□ 2.16
GTF3C5-209ENST00000485692 KLHL34Q8N239 644 aa28.55■■■□□ 2.16
GTF3C5-209ENST00000485692 AMOTQ4VCS5 1084 aa28.54■■■□□ 2.16
GTF3C5-209ENST00000485692 ASAP1Q9ULH1 1129 aa28.53■■■□□ 2.16
GTF3C5-209ENST00000485692 DCAF5Q96JK2 942 aa28.52■■■□□ 2.16
GTF3C5-209ENST00000485692 ERVV-2B6SEH9 535 aa28.51■■■□□ 2.15
GTF3C5-209ENST00000485692 MSL1Q68DK7 614 aa28.5■■■□□ 2.15
GTF3C5-209ENST00000485692 ZNF530Q6P9A1 599 aaPredicted RBP28.5■■■□□ 2.15
GTF3C5-209ENST00000485692 AEBP1Q8IUX7 1158 aa28.49■■■□□ 2.15
GTF3C5-209ENST00000485692 ATG3Q9NT62 314 aa28.49■■■□□ 2.15
GTF3C5-209ENST00000485692 UBR3Q6ZT12 1888 aa28.49■■■□□ 2.15
GTF3C5-209ENST00000485692 IL13P35225 146 aa28.48■■■□□ 2.15
GTF3C5-209ENST00000485692 GPR162Q16538 588 aa28.48■■■□□ 2.15
GTF3C5-209ENST00000485692 SULT6B1Q6IMI4 303 aa28.48■■■□□ 2.15
GTF3C5-209ENST00000485692 LINC00116Q8NCU8 138 aa28.48■■■□□ 2.15
GTF3C5-209ENST00000485692 KDRP35968 1356 aa28.48■■■□□ 2.15
GTF3C5-209ENST00000485692 ATP6V1AP38606 617 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms