RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 PRICKLE2Q7Z3G6 844 aa12.43□□□□□ -0.42
TRAPPC10-211ENST00000485621 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC10-211ENST00000485621 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
TRAPPC10-211ENST00000485621 VWA5B2Q8N398 1253 aa12.42□□□□□ -0.42
TRAPPC10-211ENST00000485621 CNTNAP3BQ96NU0 1288 aa12.42□□□□□ -0.42
TRAPPC10-211ENST00000485621 CNTNAP3Q9BZ76 1288 aa12.42□□□□□ -0.42
TRAPPC10-211ENST00000485621 SCTRP47872 440 aa12.41□□□□□ -0.42
TRAPPC10-211ENST00000485621 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-211ENST00000485621 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-211ENST00000485621 PRM3Q9NNZ6 103 aa12.41□□□□□ -0.42
TRAPPC10-211ENST00000485621 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
TRAPPC10-211ENST00000485621 RHOQP17081 205 aa12.4□□□□□ -0.42
TRAPPC10-211ENST00000485621 COL25A1Q9BXS0 654 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC10-211ENST00000485621 A0A1W2PRU2 124 aa12.39□□□□□ -0.43
TRAPPC10-211ENST00000485621 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC10-211ENST00000485621 KRT76Q01546 638 aa12.39□□□□□ -0.43
TRAPPC10-211ENST00000485621 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
TRAPPC10-211ENST00000485621 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
TRAPPC10-211ENST00000485621 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
TRAPPC10-211ENST00000485621 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
TRAPPC10-211ENST00000485621 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
TRAPPC10-211ENST00000485621 RNFT1Q5M7Z0 435 aa12.35□□□□□ -0.43
TRAPPC10-211ENST00000485621 OSBPL3Q9H4L5 887 aa12.35□□□□□ -0.43
TRAPPC10-211ENST00000485621 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
TRAPPC10-211ENST00000485621 GPC1P35052 558 aa12.34□□□□□ -0.43
TRAPPC10-211ENST00000485621 EIF4G2P78344 907 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAPPC10-211ENST00000485621 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC10-211ENST00000485621 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC10-211ENST00000485621 TRAK2O60296 914 aa12.32□□□□□ -0.44
TRAPPC10-211ENST00000485621 CLN3Q13286 438 aa12.32□□□□□ -0.44
TRAPPC10-211ENST00000485621 IRF5Q13568 498 aa12.32□□□□□ -0.44
TRAPPC10-211ENST00000485621 RAB6BQ9NRW1 208 aa12.32□□□□□ -0.44
TRAPPC10-211ENST00000485621 CUEDC1Q9NWM3 386 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC10-211ENST00000485621 MYCP01106 439 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC10-211ENST00000485621 POU4F2Q12837 409 aa12.31□□□□□ -0.44
TRAPPC10-211ENST00000485621 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
TRAPPC10-211ENST00000485621 ABL2P42684 1182 aa12.3□□□□□ -0.44
TRAPPC10-211ENST00000485621 VAC14Q08AM6 782 aa12.29□□□□□ -0.44
TRAPPC10-211ENST00000485621 RIPOR1Q6ZS17 1223 aa12.29□□□□□ -0.44
TRAPPC10-211ENST00000485621 SLFNL1Q499Z3 407 aa12.28□□□□□ -0.44
TRAPPC10-211ENST00000485621 GRIP2Q9C0E4 1043 aa12.28□□□□□ -0.44
TRAPPC10-211ENST00000485621 TSGA10IPQ3SY00 556 aa12.27□□□□□ -0.45
TRAPPC10-211ENST00000485621 GAS2L1Q99501 681 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC10-211ENST00000485621 GNRH1P01148 92 aa12.26□□□□□ -0.45
TRAPPC10-211ENST00000485621 RNF135Q8IUD6 432 aa12.26□□□□□ -0.45
TRAPPC10-211ENST00000485621 CNKSR1Q969H4 720 aa12.26□□□□□ -0.45
TRAPPC10-211ENST00000485621 DOLKQ9UPQ8 538 aa12.26□□□□□ -0.45
TRAPPC10-211ENST00000485621 NBPF10Q6P3W6 841 aaKnown RBP12.25□□□□□ -0.45
TRAPPC10-211ENST00000485621 SVOPQ8N4V2 548 aa12.25□□□□□ -0.45
TRAPPC10-211ENST00000485621 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
TRAPPC10-211ENST00000485621 DYRK1BQ9Y463 629 aa12.25□□□□□ -0.45
TRAPPC10-211ENST00000485621 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
TRAPPC10-211ENST00000485621 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC10-211ENST00000485621 IL2RAP01589 272 aa12.23□□□□□ -0.45
TRAPPC10-211ENST00000485621 MCM6Q14566 821 aa12.23□□□□□ -0.45
TRAPPC10-211ENST00000485621 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
TRAPPC10-211ENST00000485621 ESYT1Q9BSJ8 1104 aa12.23□□□□□ -0.45
TRAPPC10-211ENST00000485621 GPR25O00155 361 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 CENPCQ03188 943 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 USP4Q13107 963 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 DBN1Q16643 649 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 TAS1R3Q7RTX0 852 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 PHTF2Q8N3S3 785 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 TIMMDC1Q9NPL8 285 aa12.22□□□□□ -0.45
TRAPPC10-211ENST00000485621 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.45
TRAPPC10-211ENST00000485621 WASLO00401 505 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC10-211ENST00000485621 WASHC4Q2M389 1173 aa12.21□□□□□ -0.45
TRAPPC10-211ENST00000485621 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC10-211ENST00000485621 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
TRAPPC10-211ENST00000485621 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
TRAPPC10-211ENST00000485621 SLURP2P0DP57 97 aa12.2□□□□□ -0.46
TRAPPC10-211ENST00000485621 GAS6Q14393 721 aa12.2□□□□□ -0.46
TRAPPC10-211ENST00000485621 GMCL1Q96IK5 515 aa12.2□□□□□ -0.46
TRAPPC10-211ENST00000485621 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC10-211ENST00000485621 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
TRAPPC10-211ENST00000485621 H7C1W4 665 aa12.19□□□□□ -0.46
TRAPPC10-211ENST00000485621 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
TRAPPC10-211ENST00000485621 PHKA2P46019 1235 aa12.19□□□□□ -0.46
TRAPPC10-211ENST00000485621 GTPBP3Q969Y2 492 aaKnown RBP12.19□□□□□ -0.46
TRAPPC10-211ENST00000485621 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC10-211ENST00000485621 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
TRAPPC10-211ENST00000485621 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
TRAPPC10-211ENST00000485621 WDR44Q5JSH3 913 aa12.18□□□□□ -0.46
TRAPPC10-211ENST00000485621 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
TRAPPC10-211ENST00000485621 TMEM214Q6NUQ4 689 aaKnown RBP12.17□□□□□ -0.46
TRAPPC10-211ENST00000485621 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
TRAPPC10-211ENST00000485621 F11P03951 625 aa12.16□□□□□ -0.46
TRAPPC10-211ENST00000485621 SIRT1Q96EB6 747 aa12.16□□□□□ -0.46
TRAPPC10-211ENST00000485621 GPAMQ9HCL2 828 aa12.16□□□□□ -0.46
TRAPPC10-211ENST00000485621 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
TRAPPC10-211ENST00000485621 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
TRAPPC10-211ENST00000485621 ETNK1Q9HBU6 452 aa12.15□□□□□ -0.46
TRAPPC10-211ENST00000485621 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
TRAPPC10-211ENST00000485621 HRH3Q9Y5N1 445 aa12.15□□□□□ -0.46
TRAPPC10-211ENST00000485621 PLPP7Q8NBV4 271 aa12.14□□□□□ -0.47
TRAPPC10-211ENST00000485621 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC10-211ENST00000485621 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
TRAPPC10-211ENST00000485621 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
TRAPPC10-211ENST00000485621 CHIC2Q9UKJ5 165 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms