RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 PTGER2P43116 358 aa24.62■■□□□ 1.53
NPDC1-204ENST00000485589 NBPF6Q5VWK0 638 aa24.62■■□□□ 1.53
NPDC1-204ENST00000485589 USHBP1Q8N6Y0 703 aa24.62■■□□□ 1.53
NPDC1-204ENST00000485589 NBPF4Q96M43 638 aa24.62■■□□□ 1.53
NPDC1-204ENST00000485589 TAF1LQ8IZX4 1826 aa24.62■■□□□ 1.53
NPDC1-204ENST00000485589 ZNF827Q17R98 1081 aa24.6■■□□□ 1.53
NPDC1-204ENST00000485589 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
NPDC1-204ENST00000485589 STK32BQ9NY57 414 aa24.6■■□□□ 1.53
NPDC1-204ENST00000485589 HSP90AB2PQ58FF8 381 aa24.58■■□□□ 1.53
NPDC1-204ENST00000485589 PPP1R1BQ9UD71 204 aaPredicted RBP24.58■■□□□ 1.53
NPDC1-204ENST00000485589 ATF5Q9Y2D1 282 aaPredicted RBP24.58■■□□□ 1.53
NPDC1-204ENST00000485589 INSRP06213 1382 aa24.57■■□□□ 1.52
NPDC1-204ENST00000485589 C5P01031 1676 aa24.56■■□□□ 1.52
NPDC1-204ENST00000485589 SGIP1Q9BQI5 828 aa24.56■■□□□ 1.52
NPDC1-204ENST00000485589 CLSPNQ9HAW4 1339 aa24.56■■□□□ 1.52
NPDC1-204ENST00000485589 KCNQ4P56696 695 aa24.55■■□□□ 1.52
NPDC1-204ENST00000485589 ZCRB1Q8TBF4 217 aaKnown RBP24.55■■□□□ 1.52
NPDC1-204ENST00000485589 TIMELESSQ9UNS1 1208 aa24.55■■□□□ 1.52
NPDC1-204ENST00000485589 EMILIN1Q9Y6C2 1016 aa24.55■■□□□ 1.52
NPDC1-204ENST00000485589 FLT4P35916 1363 aa24.54■■□□□ 1.52
NPDC1-204ENST00000485589 PRIM1P49642 420 aaKnown RBP24.54■■□□□ 1.52
NPDC1-204ENST00000485589 NCAPD2Q15021 1401 aa24.53■■□□□ 1.52
NPDC1-204ENST00000485589 CDCA8Q53HL2 280 aa24.53■■□□□ 1.52
NPDC1-204ENST00000485589 SMG6Q86US8 1419 aaKnown RBP24.52■■□□□ 1.52
NPDC1-204ENST00000485589 UTRNP46939 3433 aa24.52■■□□□ 1.52
NPDC1-204ENST00000485589 AKT1S1Q96B36 256 aa24.52■■□□□ 1.52
NPDC1-204ENST00000485589 KIF24Q5T7B8 1368 aa24.51■■□□□ 1.51
NPDC1-204ENST00000485589 CHD4Q14839 1912 aa24.51■■□□□ 1.51
NPDC1-204ENST00000485589 SYTL4Q96C24 671 aaPredicted RBP24.5■■□□□ 1.51
NPDC1-204ENST00000485589 MTFR1LQ9H019 292 aa24.49■■□□□ 1.51
NPDC1-204ENST00000485589 PNPLA7Q6ZV29 1317 aa24.46■■□□□ 1.51
NPDC1-204ENST00000485589 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.5
NPDC1-204ENST00000485589 SLC27A3Q5K4L6 730 aa24.45■■□□□ 1.5
NPDC1-204ENST00000485589 RAPGEF4Q8WZA2 1011 aa24.45■■□□□ 1.5
NPDC1-204ENST00000485589 FHDC1Q9C0D6 1143 aaPredicted RBP24.45■■□□□ 1.5
NPDC1-204ENST00000485589 UBR3Q6ZT12 1888 aa24.45■■□□□ 1.5
NPDC1-204ENST00000485589 CYP27B1O15528 508 aa24.44■■□□□ 1.5
NPDC1-204ENST00000485589 TATP17735 454 aaPredicted RBP24.43■■□□□ 1.5
NPDC1-204ENST00000485589 HSPA5P11021 654 aaKnown RBP24.42■■□□□ 1.5
NPDC1-204ENST00000485589 SYT17Q9BSW7 474 aa24.42■■□□□ 1.5
NPDC1-204ENST00000485589 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
NPDC1-204ENST00000485589 C4BP0C0L5 1744 aa24.41■■□□□ 1.5
NPDC1-204ENST00000485589 PCDH11XQ9BZA7 1347 aa24.4■■□□□ 1.5
NPDC1-204ENST00000485589 PCDH11YQ9BZA8 1340 aa24.4■■□□□ 1.5
NPDC1-204ENST00000485589 POLKQ9UBT6 870 aa24.4■■□□□ 1.5
NPDC1-204ENST00000485589 WASHC2AQ641Q2 1341 aa24.39■■□□□ 1.5
NPDC1-204ENST00000485589 PPM1GO15355 546 aaPredicted RBP24.39■■□□□ 1.49
NPDC1-204ENST00000485589 YY1P25490 414 aa24.39■■□□□ 1.49
NPDC1-204ENST00000485589 EYA1Q99502 592 aa24.38■■□□□ 1.49
NPDC1-204ENST00000485589 CCNL1Q9UK58 526 aaPredicted RBP24.38■■□□□ 1.49
NPDC1-204ENST00000485589 VIRMAQ69YN4 1812 aaKnown RBP24.38■■□□□ 1.49
NPDC1-204ENST00000485589 GOLGB1Q14789 3259 aaKnown RBP24.37■■□□□ 1.49
NPDC1-204ENST00000485589 ARXQ96QS3 562 aa24.37■■□□□ 1.49
NPDC1-204ENST00000485589 MAP3K5Q99683 1374 aa24.35■■□□□ 1.49
NPDC1-204ENST00000485589 EIF4G2P78344 907 aaKnown RBP eCLIP24.35■■□□□ 1.49
NPDC1-204ENST00000485589 TNNT2P45379 298 aaPredicted RBP24.34■■□□□ 1.49
NPDC1-204ENST00000485589 TFCP2L1Q9NZI6 479 aa24.34■■□□□ 1.49
NPDC1-204ENST00000485589 PALLDQ8WX93 1383 aa24.33■■□□□ 1.49
NPDC1-204ENST00000485589 MPRIPQ6WCQ1 1025 aa24.33■■□□□ 1.49
NPDC1-204ENST00000485589 EIF4A2Q14240 407 aaKnown RBP24.32■■□□□ 1.48
NPDC1-204ENST00000485589 COL23A1Q86Y22 540 aaPredicted RBP24.32■■□□□ 1.48
NPDC1-204ENST00000485589 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
NPDC1-204ENST00000485589 SLC16A10Q8TF71 515 aa24.32■■□□□ 1.48
NPDC1-204ENST00000485589 PANK3Q9H999 370 aa24.32■■□□□ 1.48
NPDC1-204ENST00000485589 AMIGO3Q86WK7 504 aa24.31■■□□□ 1.48
NPDC1-204ENST00000485589 NKX1-1Q15270 411 aaPredicted RBP24.3■■□□□ 1.48
NPDC1-204ENST00000485589 PIGBQ92521 554 aa24.29■■□□□ 1.48
NPDC1-204ENST00000485589 COL5A3P25940 1745 aaPredicted RBP24.29■■□□□ 1.48
NPDC1-204ENST00000485589 DCAF8L1A6NGE4 600 aa24.26■■□□□ 1.47
NPDC1-204ENST00000485589 SMIM5Q71RC9 77 aa24.26■■□□□ 1.47
NPDC1-204ENST00000485589 IGSF1Q8N6C5 1336 aa24.26■■□□□ 1.47
NPDC1-204ENST00000485589 ZNF831Q5JPB2 1677 aa24.25■■□□□ 1.47
NPDC1-204ENST00000485589 SCN11AQ9UI33 1791 aa24.25■■□□□ 1.47
NPDC1-204ENST00000485589 NLGN2Q8NFZ4 835 aa24.25■■□□□ 1.47
NPDC1-204ENST00000485589 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
NPDC1-204ENST00000485589 PHKG2P15735 406 aa24.24■■□□□ 1.47
NPDC1-204ENST00000485589 MSL1Q68DK7 614 aa24.24■■□□□ 1.47
NPDC1-204ENST00000485589 SPG7Q9UQ90 795 aa24.24■■□□□ 1.47
NPDC1-204ENST00000485589 KLHL34Q8N239 644 aa24.23■■□□□ 1.47
NPDC1-204ENST00000485589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.23■■□□□ 1.47
NPDC1-204ENST00000485589 POLD1P28340 1107 aa24.21■■□□□ 1.47
NPDC1-204ENST00000485589 ASAP1Q9ULH1 1129 aa24.21■■□□□ 1.47
NPDC1-204ENST00000485589 KDM6AO15550 1401 aaPredicted RBP24.2■■□□□ 1.46
NPDC1-204ENST00000485589 MSH5O43196 834 aa24.2■■□□□ 1.46
NPDC1-204ENST00000485589 LINC00116Q8NCU8 138 aa24.2■■□□□ 1.46
NPDC1-204ENST00000485589 C4AP0C0L4 1744 aa24.2■■□□□ 1.46
NPDC1-204ENST00000485589 IFNL2Q8IZJ0 200 aa24.19■■□□□ 1.46
NPDC1-204ENST00000485589 ITPK1Q13572 414 aa24.18■■□□□ 1.46
NPDC1-204ENST00000485589 AEBP1Q8IUX7 1158 aa24.18■■□□□ 1.46
NPDC1-204ENST00000485589 SMARCC1Q92922 1105 aaPredicted RBP24.18■■□□□ 1.46
NPDC1-204ENST00000485589 TJP1Q07157 1748 aa24.18■■□□□ 1.46
NPDC1-204ENST00000485589 KIAA1551Q9HCM1 1747 aa24.18■■□□□ 1.46
NPDC1-204ENST00000485589 KDRP35968 1356 aa24.17■■□□□ 1.46
NPDC1-204ENST00000485589 KIF7Q2M1P5 1343 aa24.17■■□□□ 1.46
NPDC1-204ENST00000485589 LOC102724428A0A0B4J2F2 783 aa24.17■■□□□ 1.46
NPDC1-204ENST00000485589 SIK1P57059 783 aa24.17■■□□□ 1.46
NPDC1-204ENST00000485589 PLEKHG2Q9H7P9 1386 aa24.16■■□□□ 1.46
NPDC1-204ENST00000485589 ZNF784Q8NCA9 323 aaPredicted RBP24.16■■□□□ 1.46
NPDC1-204ENST00000485589 ATG3Q9NT62 314 aa24.16■■□□□ 1.46
NPDC1-204ENST00000485589 TMOD3Q9NYL9 352 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms