RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 SND1Q7KZF4 910 aaKnown RBP eCLIP7.11□□□□□ -1.272e-6■■□□□ 12.4
FN1-222ENST00000485567 MPNDQ8N594 471 aa7.11□□□□□ -1.27
FN1-222ENST00000485567 C1orf216Q8TAB5 229 aa7.11□□□□□ -1.27
FN1-222ENST00000485567 RNF166Q96A37 237 aaPredicted RBP7.11□□□□□ -1.27
FN1-222ENST00000485567 ZNF594Q96JF6 807 aaPredicted RBP7.11□□□□□ -1.27
FN1-222ENST00000485567 KIAA1024Q9UPX6 916 aa7.11□□□□□ -1.27
FN1-222ENST00000485567 RBM19Q9Y4C8 960 aaKnown RBP7.11□□□□□ -1.27
FN1-222ENST00000485567 PPP1R18Q6NYC8 613 aa7.1□□□□□ -1.27
FN1-222ENST00000485567 CDK15Q96Q40 435 aa7.1□□□□□ -1.27
FN1-222ENST00000485567 M0R2N6 131 aa7.09□□□□□ -1.27
FN1-222ENST00000485567 MYCP01106 439 aaPredicted RBP7.09□□□□□ -1.27
FN1-222ENST00000485567 ATP2B4P23634 1241 aa7.09□□□□□ -1.27
FN1-222ENST00000485567 VASH1Q7L8A9 365 aaPredicted RBP7.09□□□□□ -1.27
FN1-222ENST00000485567 RANGAP1P46060 587 aaPredicted RBP7.08□□□□□ -1.28
FN1-222ENST00000485567 INTS6LQ5JSJ4 861 aaKnown RBP7.08□□□□□ -1.28
FN1-222ENST00000485567 RC3H1Q5TC82 1133 aaKnown RBP7.08□□□□□ -1.28
FN1-222ENST00000485567 TPCN2Q8NHX9 752 aa7.08□□□□□ -1.28
FN1-222ENST00000485567 ERVH48-1M5A8F1 160 aa7.07□□□□□ -1.28
FN1-222ENST00000485567 PSME1Q06323 249 aa7.07□□□□□ -1.28
FN1-222ENST00000485567 DHX9Q08211 1270 aaKnown RBP7.07□□□□□ -1.28
FN1-222ENST00000485567 CCDC27Q2M243 656 aa7.07□□□□□ -1.28
FN1-222ENST00000485567 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
FN1-222ENST00000485567 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
FN1-222ENST00000485567 MTMR7Q9Y216 660 aa7.07□□□□□ -1.28
FN1-222ENST00000485567 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
FN1-222ENST00000485567 GRM5P41594 1212 aa7.06□□□□□ -1.28
FN1-222ENST00000485567 ERVK-9P63128 1117 aa7.06□□□□□ -1.28
FN1-222ENST00000485567 TAS1R3Q7RTX0 852 aa7.06□□□□□ -1.28
FN1-222ENST00000485567 SIAH2O43255 324 aa7.05□□□□□ -1.28
FN1-222ENST00000485567 OCLNQ16625 522 aa7.05□□□□□ -1.28
FN1-222ENST00000485567 IFFO2Q5TF58 517 aa7.05□□□□□ -1.28
FN1-222ENST00000485567 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
FN1-222ENST00000485567 LIAT1Q6ZQX7 453 aa7.05□□□□□ -1.28
FN1-222ENST00000485567 ESF1Q9H501 851 aaKnown RBP7.05□□□□□ -1.28
FN1-222ENST00000485567 CXXC1Q9P0U4 656 aaPredicted RBP7.05□□□□□ -1.28
FN1-222ENST00000485567 SCTRP47872 440 aa7.04□□□□□ -1.28
FN1-222ENST00000485567 RAB15P59190 212 aa7.04□□□□□ -1.28
FN1-222ENST00000485567 WASLO00401 505 aaPredicted RBP7.03□□□□□ -1.28
FN1-222ENST00000485567 PRMT3O60678 531 aa7.03□□□□□ -1.28
FN1-222ENST00000485567 NR5A1Q13285 461 aa7.03□□□□□ -1.28
FN1-222ENST00000485567 ARID5BQ14865 1188 aa7.03□□□□□ -1.28
FN1-222ENST00000485567 HINFPQ9BQA5 517 aa7.03□□□□□ -1.28
FN1-222ENST00000485567 OSBPL3Q9H4L5 887 aa7.03□□□□□ -1.28
FN1-222ENST00000485567 SOWAHDA6NJG2 315 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 WNT7AO00755 349 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 BACH1O14867 736 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 ADH1CP00326 375 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 WEE1P30291 646 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 EMID1Q96A84 441 aaPredicted RBP7.02□□□□□ -1.29
FN1-222ENST00000485567 PRIMPOLQ96LW4 560 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 ZNF358Q9NW07 568 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 AMOTL2Q9Y2J4 779 aa7.02□□□□□ -1.29
FN1-222ENST00000485567 TMEM229AB2RXF0 380 aa7.01□□□□□ -1.29
FN1-222ENST00000485567 FSHRP23945 695 aa7.01□□□□□ -1.29
FN1-222ENST00000485567 SLC19A1P41440 591 aa7.01□□□□□ -1.29
FN1-222ENST00000485567 MYT1Q01538 1121 aa7.01□□□□□ -1.29
FN1-222ENST00000485567 CCDC116Q8IYX3 515 aa7.01□□□□□ -1.29
FN1-222ENST00000485567 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
FN1-222ENST00000485567 TMPRSS4Q9NRS4 437 aa7.01□□□□□ -1.29
FN1-222ENST00000485567 LILRA1O75019 489 aa7□□□□□ -1.29
FN1-222ENST00000485567 ERCC3P19447 782 aa7□□□□□ -1.29
FN1-222ENST00000485567 SCNN1DP51172 638 aa7□□□□□ -1.29
FN1-222ENST00000485567 PPP1R26Q5T8A7 1209 aaPredicted RBP7□□□□□ -1.29
FN1-222ENST00000485567 TSEN2Q8NCE0 465 aaKnown RBP7□□□□□ -1.29
FN1-222ENST00000485567 GAS2L2Q8NHY3 880 aa7□□□□□ -1.29
FN1-222ENST00000485567 COL26A1Q96A83 441 aa7□□□□□ -1.29
FN1-222ENST00000485567 SLC4A9Q96Q91 983 aa7□□□□□ -1.29
FN1-222ENST00000485567 PTCD1O75127 700 aaKnown RBP6.99□□□□□ -1.29
FN1-222ENST00000485567 GNRH1P01148 92 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 INHAP05111 366 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 IGFBP4P22692 258 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 SERPINB4P48594 390 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 GDF10P55107 478 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 CYP2U1Q7Z449 544 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 ZNF784Q8NCA9 323 aaPredicted RBP6.99□□□□□ -1.29
FN1-222ENST00000485567 CYLDQ9NQC7 956 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 TLL2Q9Y6L7 1015 aa6.99□□□□□ -1.29
FN1-222ENST00000485567 FOXO3O43524 673 aa6.98□□□□□ -1.29
FN1-222ENST00000485567 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
FN1-222ENST00000485567 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
FN1-222ENST00000485567 SPRYD7Q5W111 196 aa6.98□□□□□ -1.29
FN1-222ENST00000485567 FOXD4L4Q8WXT5 416 aaPredicted RBP6.98□□□□□ -1.29
FN1-222ENST00000485567 MRGPRX2Q96LB1 330 aa6.98□□□□□ -1.29
FN1-222ENST00000485567 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
FN1-222ENST00000485567 EMILIN1Q9Y6C2 1016 aa6.98□□□□□ -1.29
FN1-222ENST00000485567 SCNN1AP37088 669 aa6.97□□□□□ -1.29
FN1-222ENST00000485567 ICMTO60725 284 aa6.96□□□□□ -1.3
FN1-222ENST00000485567 NR3C2P08235 984 aa6.96□□□□□ -1.3
FN1-222ENST00000485567 ADD1P35611 737 aaKnown RBP6.96□□□□□ -1.3
FN1-222ENST00000485567 EPHA4P54764 986 aa6.96□□□□□ -1.3
FN1-222ENST00000485567 FKBP5Q13451 457 aaPredicted RBP6.96□□□□□ -1.3
FN1-222ENST00000485567 ZNF598Q86UK7 904 aaKnown RBP6.96□□□□□ -1.3
FN1-222ENST00000485567 XAGE2Q96GT9 111 aa6.96□□□□□ -1.3
FN1-222ENST00000485567 ETNK1Q9HBU6 452 aa6.96□□□□□ -1.3
FN1-222ENST00000485567 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
FN1-222ENST00000485567 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
FN1-222ENST00000485567 SF3B2Q13435 895 aaKnown RBP6.95□□□□□ -1.3
FN1-222ENST00000485567 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
FN1-222ENST00000485567 STAG2Q8N3U4 1231 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms