RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 HSP90AB2PQ58FF8 381 aa35.66■■■■□ 3.3
HLA-F-227ENST00000485513 USHBP1Q8N6Y0 703 aa35.65■■■■□ 3.3
HLA-F-227ENST00000485513 PAPPAQ13219 1627 aa35.64■■■■□ 3.3
HLA-F-227ENST00000485513 DOT1LQ8TEK3 1739 aa35.63■■■■□ 3.29
HLA-F-227ENST00000485513 CGNL1Q0VF96 1302 aa35.62■■■■□ 3.29
HLA-F-227ENST00000485513 RAPGEF4Q8WZA2 1011 aa35.62■■■■□ 3.29
HLA-F-227ENST00000485513 SYTL4Q96C24 671 aaPredicted RBP35.62■■■■□ 3.29
HLA-F-227ENST00000485513 PRIM1P49642 420 aaKnown RBP35.61■■■■□ 3.29
HLA-F-227ENST00000485513 CCER1Q8TC90 406 aaPredicted RBP35.6■■■■□ 3.29
HLA-F-227ENST00000485513 POLR3GLQ9BT43 218 aa35.6■■■■□ 3.29
HLA-F-227ENST00000485513 LRRC4BQ9NT99 713 aa35.6■■■■□ 3.29
HLA-F-227ENST00000485513 ATF5Q9Y2D1 282 aaPredicted RBP35.59■■■■□ 3.29
HLA-F-227ENST00000485513 EMILIN1Q9Y6C2 1016 aa35.59■■■■□ 3.29
HLA-F-227ENST00000485513 TATP17735 454 aaPredicted RBP35.58■■■■□ 3.29
HLA-F-227ENST00000485513 PTGER2P43116 358 aa35.56■■■■□ 3.28
HLA-F-227ENST00000485513 EIF4G2P78344 907 aaKnown RBP eCLIP35.56■■■■□ 3.28
HLA-F-227ENST00000485513 SLC27A3Q5K4L6 730 aa35.56■■■■□ 3.28
HLA-F-227ENST00000485513 MTFR1LQ9H019 292 aa35.55■■■■□ 3.28
HLA-F-227ENST00000485513 ZNF827Q17R98 1081 aa35.54■■■■□ 3.28
HLA-F-227ENST00000485513 NSD2O96028 1365 aa35.53■■■■□ 3.28
HLA-F-227ENST00000485513 PPM1GO15355 546 aaPredicted RBP35.53■■■■□ 3.28
HLA-F-227ENST00000485513 HSPA5P11021 654 aaKnown RBP35.52■■■■□ 3.28
HLA-F-227ENST00000485513 ANKRD26Q9UPS8 1709 aa35.52■■■■□ 3.28
HLA-F-227ENST00000485513 MAP2P11137 1827 aaKnown RBP35.5■■■■□ 3.27
HLA-F-227ENST00000485513 AKT1S1Q96B36 256 aa35.49■■■■□ 3.27
HLA-F-227ENST00000485513 PCDH11XQ9BZA7 1347 aa35.49■■■■□ 3.27
HLA-F-227ENST00000485513 PCDH11YQ9BZA8 1340 aa35.49■■■■□ 3.27
HLA-F-227ENST00000485513 LY75O60449 1722 aa35.49■■■■□ 3.27
HLA-F-227ENST00000485513 DCAF8L1A6NGE4 600 aa35.48■■■■□ 3.27
HLA-F-227ENST00000485513 KCNQ4P56696 695 aa35.46■■■■□ 3.27
HLA-F-227ENST00000485513 WASHC2AQ641Q2 1341 aa35.46■■■■□ 3.27
HLA-F-227ENST00000485513 SGIP1Q9BQI5 828 aa35.45■■■■□ 3.27
HLA-F-227ENST00000485513 QSER1Q2KHR3 1735 aa35.43■■■■□ 3.26
HLA-F-227ENST00000485513 NCAPD2Q15021 1401 aa35.43■■■■□ 3.26
HLA-F-227ENST00000485513 POLKQ9UBT6 870 aa35.43■■■■□ 3.26
HLA-F-227ENST00000485513 CCNL1Q9UK58 526 aaPredicted RBP35.41■■■■□ 3.26
HLA-F-227ENST00000485513 PKD1L3Q7Z443 1732 aa35.4■■■■□ 3.26
HLA-F-227ENST00000485513 CYP27B1O15528 508 aa35.4■■■■□ 3.26
HLA-F-227ENST00000485513 TFCP2L1Q9NZI6 479 aa35.4■■■■□ 3.26
HLA-F-227ENST00000485513 TNNT2P45379 298 aaPredicted RBP35.39■■■■□ 3.26
HLA-F-227ENST00000485513 FHDC1Q9C0D6 1143 aaPredicted RBP35.39■■■■□ 3.26
HLA-F-227ENST00000485513 PANK3Q9H999 370 aa35.39■■■■□ 3.26
HLA-F-227ENST00000485513 TUBGCP6Q96RT7 1819 aa35.38■■■■□ 3.25
HLA-F-227ENST00000485513 PNPLA7Q6ZV29 1317 aa35.37■■■■□ 3.25
HLA-F-227ENST00000485513 SLC16A10Q8TF71 515 aa35.37■■■■□ 3.25
HLA-F-227ENST00000485513 ARXQ96QS3 562 aa35.37■■■■□ 3.25
HLA-F-227ENST00000485513 EYA1Q99502 592 aa35.37■■■■□ 3.25
HLA-F-227ENST00000485513 SYT17Q9BSW7 474 aa35.36■■■■□ 3.25
HLA-F-227ENST00000485513 YY1P25490 414 aa35.34■■■■□ 3.25
HLA-F-227ENST00000485513 SPG7Q9UQ90 795 aa35.34■■■■□ 3.25
HLA-F-227ENST00000485513 TOGARAM1Q9Y4F4 1720 aa35.33■■■■□ 3.25
HLA-F-227ENST00000485513 MPRIPQ6WCQ1 1025 aa35.33■■■■□ 3.25
HLA-F-227ENST00000485513 ITGB4P16144 1822 aa35.32■■■■□ 3.24
HLA-F-227ENST00000485513 EIF4A2Q14240 407 aaKnown RBP35.3■■■■□ 3.24
HLA-F-227ENST00000485513 PALLDQ8WX93 1383 aa35.29■■■■□ 3.24
HLA-F-227ENST00000485513 NKX1-1Q15270 411 aaPredicted RBP35.29■■■■□ 3.24
HLA-F-227ENST00000485513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.29■■■■□ 3.24
HLA-F-227ENST00000485513 POLD1P28340 1107 aa35.27■■■■□ 3.24
HLA-F-227ENST00000485513 C5P01031 1676 aa35.27■■■■□ 3.24
HLA-F-227ENST00000485513 MAP3K5Q99683 1374 aa35.26■■■■□ 3.24
HLA-F-227ENST00000485513 COL24A1Q17RW2 1714 aa35.26■■■■□ 3.24
HLA-F-227ENST00000485513 HMGB2P26583 209 aaKnown RBP35.25■■■■□ 3.23
HLA-F-227ENST00000485513 SMARCC1Q92922 1105 aaPredicted RBP35.25■■■■□ 3.23
HLA-F-227ENST00000485513 PIGBQ92521 554 aa35.23■■■■□ 3.23
HLA-F-227ENST00000485513 TAF1LQ8IZX4 1826 aa35.22■■■■□ 3.23
HLA-F-227ENST00000485513 MSH5O43196 834 aa35.22■■■■□ 3.23
HLA-F-227ENST00000485513 MORC1Q86VD1 984 aa35.22■■■■□ 3.23
HLA-F-227ENST00000485513 IFNL2Q8IZJ0 200 aa35.21■■■■□ 3.23
HLA-F-227ENST00000485513 COL23A1Q86Y22 540 aaPredicted RBP35.2■■■■□ 3.23
HLA-F-227ENST00000485513 IGSF1Q8N6C5 1336 aa35.2■■■■□ 3.23
HLA-F-227ENST00000485513 PHKG2P15735 406 aa35.19■■■■□ 3.22
HLA-F-227ENST00000485513 PLEKHG2Q9H7P9 1386 aa35.19■■■■□ 3.22
HLA-F-227ENST00000485513 KNSTRNQ9Y448 316 aa35.19■■■■□ 3.22
HLA-F-227ENST00000485513 KLHL34Q8N239 644 aa35.17■■■■□ 3.22
HLA-F-227ENST00000485513 TMOD3Q9NYL9 352 aa35.17■■■■□ 3.22
HLA-F-227ENST00000485513 C4BP0C0L5 1744 aa35.14■■■■□ 3.22
HLA-F-227ENST00000485513 FLAD1Q8NFF5 587 aa35.13■■■■□ 3.21
HLA-F-227ENST00000485513 KIF7Q2M1P5 1343 aa35.11■■■■□ 3.21
HLA-F-227ENST00000485513 LOC102724428A0A0B4J2F2 783 aa35.1■■■■□ 3.21
HLA-F-227ENST00000485513 SIK1P57059 783 aa35.1■■■■□ 3.21
HLA-F-227ENST00000485513 AK7Q96M32 723 aa35.1■■■■□ 3.21
HLA-F-227ENST00000485513 MSL1Q68DK7 614 aa35.09■■■■□ 3.21
HLA-F-227ENST00000485513 ASAP1Q9ULH1 1129 aa35.09■■■■□ 3.21
HLA-F-227ENST00000485513 PLEKHO1Q53GL0 409 aaPredicted RBP35.08■■■■□ 3.21
HLA-F-227ENST00000485513 AMER1Q5JTC6 1135 aaPredicted RBP35.07■■■■□ 3.2
HLA-F-227ENST00000485513 UTRNP46939 3433 aa35.05■■■■□ 3.2
HLA-F-227ENST00000485513 CHD4Q14839 1912 aa35.05■■■■□ 3.2
HLA-F-227ENST00000485513 HSP90AB1P08238 724 aaKnown RBP35.05■■■■□ 3.2
HLA-F-227ENST00000485513 GPR162Q16538 588 aa35.05■■■■□ 3.2
HLA-F-227ENST00000485513 UBR3Q6ZT12 1888 aa35.05■■■■□ 3.2
HLA-F-227ENST00000485513 AMOTQ4VCS5 1084 aa35.04■■■■□ 3.2
HLA-F-227ENST00000485513 ZNF530Q6P9A1 599 aaPredicted RBP35.03■■■■□ 3.2
HLA-F-227ENST00000485513 AEBP1Q8IUX7 1158 aa35.03■■■■□ 3.2
HLA-F-227ENST00000485513 LINC00116Q8NCU8 138 aa35.03■■■■□ 3.2
HLA-F-227ENST00000485513 NLGN2Q8NFZ4 835 aa35.03■■■■□ 3.2
HLA-F-227ENST00000485513 DCAF5Q96JK2 942 aa35.03■■■■□ 3.2
HLA-F-227ENST00000485513 ATG3Q9NT62 314 aa35.03■■■■□ 3.2
HLA-F-227ENST00000485513 ERVV-2B6SEH9 535 aa35.02■■■■□ 3.2
HLA-F-227ENST00000485513 AMIGO3Q86WK7 504 aa35.02■■■■□ 3.2
HLA-F-227ENST00000485513 PHF14O94880 888 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms