RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-204ENST00000485373 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
RTCB-204ENST00000485373 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.45
RTCB-204ENST00000485373 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
RTCB-204ENST00000485373 SHANK3Q9BYB0 1731 aa12.26□□□□□ -0.45
RTCB-204ENST00000485373 ANP32CO43423 234 aa12.26□□□□□ -0.45
RTCB-204ENST00000485373 HMOX1P09601 288 aa12.26□□□□□ -0.45
RTCB-204ENST00000485373 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
RTCB-204ENST00000485373 MARCH10Q8NA82 808 aaPredicted RBP12.26□□□□□ -0.45
RTCB-204ENST00000485373 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
RTCB-204ENST00000485373 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
RTCB-204ENST00000485373 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
RTCB-204ENST00000485373 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
RTCB-204ENST00000485373 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
RTCB-204ENST00000485373 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
RTCB-204ENST00000485373 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
RTCB-204ENST00000485373 TRIM37O94972 964 aa12.23□□□□□ -0.45
RTCB-204ENST00000485373 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
RTCB-204ENST00000485373 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
RTCB-204ENST00000485373 PLEKHO1Q53GL0 409 aaPredicted RBP12.23□□□□□ -0.45
RTCB-204ENST00000485373 KDRP35968 1356 aa12.22□□□□□ -0.45
RTCB-204ENST00000485373 DOT1LQ8TEK3 1739 aa12.21□□□□□ -0.45
RTCB-204ENST00000485373 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.45
RTCB-204ENST00000485373 AMOTQ4VCS5 1084 aa12.21□□□□□ -0.45
RTCB-204ENST00000485373 ZNF530Q6P9A1 599 aaPredicted RBP12.21□□□□□ -0.45
RTCB-204ENST00000485373 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
RTCB-204ENST00000485373 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
RTCB-204ENST00000485373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
RTCB-204ENST00000485373 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
RTCB-204ENST00000485373 C1orf141Q5JVX7 400 aa12.2□□□□□ -0.46
RTCB-204ENST00000485373 SYTL4Q96C24 671 aaPredicted RBP12.2□□□□□ -0.46
RTCB-204ENST00000485373 BCL9O00512 1426 aa12.2□□□□□ -0.46
RTCB-204ENST00000485373 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
RTCB-204ENST00000485373 CYP27B1O15528 508 aa12.19□□□□□ -0.46
RTCB-204ENST00000485373 PRKAR2BP31323 418 aa12.19□□□□□ -0.46
RTCB-204ENST00000485373 BAG6P46379 1132 aa12.19□□□□□ -0.46
RTCB-204ENST00000485373 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
RTCB-204ENST00000485373 IFNL2Q8IZJ0 200 aa12.19□□□□□ -0.46
RTCB-204ENST00000485373 APBA3O96018 575 aa12.18□□□□□ -0.46
RTCB-204ENST00000485373 NEFMP07197 916 aa12.18□□□□□ -0.46
RTCB-204ENST00000485373 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
RTCB-204ENST00000485373 BTAF1O14981 1849 aa12.17□□□□□ -0.46
RTCB-204ENST00000485373 KCNQ2O43526 872 aa12.17□□□□□ -0.46
RTCB-204ENST00000485373 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
RTCB-204ENST00000485373 PHKG2P15735 406 aa12.17□□□□□ -0.46
RTCB-204ENST00000485373 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
RTCB-204ENST00000485373 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
RTCB-204ENST00000485373 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
RTCB-204ENST00000485373 ITGB4P16144 1822 aa12.16□□□□□ -0.46
RTCB-204ENST00000485373 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
RTCB-204ENST00000485373 FCHSD2O94868 740 aa12.16□□□□□ -0.46
RTCB-204ENST00000485373 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
RTCB-204ENST00000485373 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
RTCB-204ENST00000485373 EP400Q96L91 3159 aa12.16□□□□□ -0.46
RTCB-204ENST00000485373 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
RTCB-204ENST00000485373 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
RTCB-204ENST00000485373 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
RTCB-204ENST00000485373 PTF1AQ7RTS3 328 aa12.15□□□□□ -0.46
RTCB-204ENST00000485373 PNNQ9H307 717 aaKnown RBP12.15□□□□□ -0.46
RTCB-204ENST00000485373 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
RTCB-204ENST00000485373 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
RTCB-204ENST00000485373 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
RTCB-204ENST00000485373 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
RTCB-204ENST00000485373 SCN11AQ9UI33 1791 aa12.14□□□□□ -0.47
RTCB-204ENST00000485373 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
RTCB-204ENST00000485373 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
RTCB-204ENST00000485373 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
RTCB-204ENST00000485373 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
RTCB-204ENST00000485373 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
RTCB-204ENST00000485373 CABP4P57796 275 aa12.12□□□□□ -0.47
RTCB-204ENST00000485373 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
RTCB-204ENST00000485373 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
RTCB-204ENST00000485373 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
RTCB-204ENST00000485373 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
RTCB-204ENST00000485373 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
RTCB-204ENST00000485373 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
RTCB-204ENST00000485373 DLG5Q8TDM6 1919 aa12.11□□□□□ -0.47
RTCB-204ENST00000485373 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
RTCB-204ENST00000485373 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
RTCB-204ENST00000485373 RNMTO43148 476 aaKnown RBP12.1□□□□□ -0.47
RTCB-204ENST00000485373 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
RTCB-204ENST00000485373 CAMKK2Q96RR4 588 aa12.1□□□□□ -0.47
RTCB-204ENST00000485373 ADAMTS8Q9UP79 889 aa12.1□□□□□ -0.47
RTCB-204ENST00000485373 RREB1Q92766 1687 aa12.1□□□□□ -0.47
RTCB-204ENST00000485373 PLSCR1O15162 318 aa12.09□□□□□ -0.47
RTCB-204ENST00000485373 PIGBQ92521 554 aa12.09□□□□□ -0.47
RTCB-204ENST00000485373 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
RTCB-204ENST00000485373 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
RTCB-204ENST00000485373 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
RTCB-204ENST00000485373 TEFQ10587 303 aa12.08□□□□□ -0.48
RTCB-204ENST00000485373 NFE2L2Q16236 605 aa12.08□□□□□ -0.48
RTCB-204ENST00000485373 TXNRD1Q16881 649 aa12.08□□□□□ -0.48
RTCB-204ENST00000485373 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
RTCB-204ENST00000485373 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
RTCB-204ENST00000485373 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
RTCB-204ENST00000485373 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
RTCB-204ENST00000485373 LY75O60449 1722 aa12.07□□□□□ -0.48
RTCB-204ENST00000485373 SLC52A2Q9HAB3 445 aa12.07□□□□□ -0.48
RTCB-204ENST00000485373 MRC1P22897 1456 aa12.07□□□□□ -0.48
RTCB-204ENST00000485373 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
RTCB-204ENST00000485373 MCM10Q7L590 875 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 292.4 ms