RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
VPS50-217ENST00000485140 GMPRP36959 345 aa7.82□□□□□ -1.16
VPS50-217ENST00000485140 USP4Q13107 963 aa7.82□□□□□ -1.16
VPS50-217ENST00000485140 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
VPS50-217ENST00000485140 AGBL1Q96MI9 1066 aa7.82□□□□□ -1.16
VPS50-217ENST00000485140 CEP126Q9P2H0 1117 aa7.82□□□□□ -1.16
VPS50-217ENST00000485140 RAD21O60216 631 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 GPR37L1O60883 481 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 CLN3Q13286 438 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 MCM6Q14566 821 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 ZSCAN1Q8NBB4 408 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 TBC1D2BQ9UPU7 963 aa7.81□□□□□ -1.16
VPS50-217ENST00000485140 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
VPS50-217ENST00000485140 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
VPS50-217ENST00000485140 SOBPA7XYQ1 873 aa7.8□□□□□ -1.16
VPS50-217ENST00000485140 CTSOP43234 321 aaPredicted RBP7.8□□□□□ -1.16
VPS50-217ENST00000485140 FOXR1Q6PIV2 292 aa7.8□□□□□ -1.16
VPS50-217ENST00000485140 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
VPS50-217ENST00000485140 ZNF395Q9H8N7 513 aaPredicted RBP7.8□□□□□ -1.16
VPS50-217ENST00000485140 H7C1W4 665 aa7.79□□□□□ -1.16
VPS50-217ENST00000485140 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
VPS50-217ENST00000485140 ITGA6P23229 1130 aa7.79□□□□□ -1.16
VPS50-217ENST00000485140 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
VPS50-217ENST00000485140 SEMA3FQ13275 785 aa7.79□□□□□ -1.16
VPS50-217ENST00000485140 RNF135Q8IUD6 432 aa7.79□□□□□ -1.16
VPS50-217ENST00000485140 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
VPS50-217ENST00000485140 TRAK2O60296 914 aa7.78□□□□□ -1.16
VPS50-217ENST00000485140 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
VPS50-217ENST00000485140 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
VPS50-217ENST00000485140 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
VPS50-217ENST00000485140 MEN1O00255 615 aa7.77□□□□□ -1.17
VPS50-217ENST00000485140 ABL2P42684 1182 aa7.77□□□□□ -1.17
VPS50-217ENST00000485140 VEGFBP49765 207 aa7.77□□□□□ -1.17
VPS50-217ENST00000485140 FOXD4L5Q5VV16 416 aaPredicted RBP7.77□□□□□ -1.17
VPS50-217ENST00000485140 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
VPS50-217ENST00000485140 SPATA31C2B4DYI2 1134 aa7.76□□□□□ -1.17
VPS50-217ENST00000485140 TMEM132AQ24JP5 1023 aa7.76□□□□□ -1.17
VPS50-217ENST00000485140 KDF1Q8NAX2 398 aaPredicted RBP7.76□□□□□ -1.17
VPS50-217ENST00000485140 GDPD2Q9HCC8 539 aa7.76□□□□□ -1.17
VPS50-217ENST00000485140 DYRK1BQ9Y463 629 aa7.76□□□□□ -1.17
VPS50-217ENST00000485140 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
VPS50-217ENST00000485140 IRF5Q13568 498 aa7.75□□□□□ -1.17
VPS50-217ENST00000485140 NFATC2IPQ8NCF5 419 aa7.75□□□□□ -1.17
VPS50-217ENST00000485140 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
VPS50-217ENST00000485140 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
VPS50-217ENST00000485140 CHIC2Q9UKJ5 165 aa7.75□□□□□ -1.17
VPS50-217ENST00000485140 GNASQ5JWF2 1037 aa7.74□□□□□ -1.17
VPS50-217ENST00000485140 TAS1R3Q7RTX0 852 aa7.74□□□□□ -1.17
VPS50-217ENST00000485140 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
VPS50-217ENST00000485140 LBRQ14739 615 aaKnown RBP7.73□□□□□ -1.17
VPS50-217ENST00000485140 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
VPS50-217ENST00000485140 GRIP2Q9C0E4 1043 aa7.73□□□□□ -1.17
VPS50-217ENST00000485140 NSFL1CQ9UNZ2 370 aaKnown RBP7.73□□□□□ -1.17
VPS50-217ENST00000485140 RNF225M0QZC1 329 aaPredicted RBP7.72□□□□□ -1.17
VPS50-217ENST00000485140 PHTF2Q8N3S3 785 aa7.72□□□□□ -1.17
VPS50-217ENST00000485140 CNKSR1Q969H4 720 aa7.72□□□□□ -1.17
VPS50-217ENST00000485140 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
VPS50-217ENST00000485140 ARHGEF10LQ9HCE6 1279 aa7.72□□□□□ -1.17
VPS50-217ENST00000485140 CDC14CA4D256 554 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 UBTFP17480 764 aaKnown RBP7.71□□□□□ -1.18
VPS50-217ENST00000485140 SCTRP47872 440 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 VAC14Q08AM6 782 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 XAGE2Q96GT9 111 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.18
VPS50-217ENST00000485140 ZSCAN10Q96SZ4 725 aaPredicted RBP7.71□□□□□ -1.18
VPS50-217ENST00000485140 COG6Q9Y2V7 657 aa7.71□□□□□ -1.18
VPS50-217ENST00000485140 SENP3-EIF4A1A0A087X0R7 540 aa7.7□□□□□ -1.18
VPS50-217ENST00000485140 A0A1B0GTH6 734 aa7.7□□□□□ -1.18
VPS50-217ENST00000485140 WASLO00401 505 aaPredicted RBP7.7□□□□□ -1.18
VPS50-217ENST00000485140 NBPF10Q6P3W6 841 aaKnown RBP7.7□□□□□ -1.18
VPS50-217ENST00000485140 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
VPS50-217ENST00000485140 F11P03951 625 aa7.69□□□□□ -1.18
VPS50-217ENST00000485140 SUZ12Q15022 739 aaKnown RBP7.69□□□□□ -1.18
VPS50-217ENST00000485140 EML3Q32P44 896 aa7.69□□□□□ -1.18
VPS50-217ENST00000485140 TMEM214Q6NUQ4 689 aaKnown RBP7.69□□□□□ -1.18
VPS50-217ENST00000485140 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
VPS50-217ENST00000485140 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
VPS50-217ENST00000485140 TIMMDC1Q9NPL8 285 aa7.69□□□□□ -1.18
VPS50-217ENST00000485140 PHF24Q9UPV7 400 aa7.69□□□□□ -1.18
VPS50-217ENST00000485140 CENPCQ03188 943 aa7.68□□□□□ -1.18
VPS50-217ENST00000485140 SRSF11Q05519 484 aaKnown RBP7.68□□□□□ -1.18
VPS50-217ENST00000485140 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
VPS50-217ENST00000485140 C1orf216Q8TAB5 229 aa7.68□□□□□ -1.18
VPS50-217ENST00000485140 SLURP2P0DP57 97 aa7.67□□□□□ -1.18
VPS50-217ENST00000485140 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
VPS50-217ENST00000485140 TRIM50Q86XT4 487 aa7.67□□□□□ -1.18
VPS50-217ENST00000485140 PGBD3Q8N328 593 aa7.67□□□□□ -1.18
VPS50-217ENST00000485140 ENAMQ9NRM1 1142 aa7.67□□□□□ -1.18
VPS50-217ENST00000485140 LRRC4BQ9NT99 713 aa7.67□□□□□ -1.18
VPS50-217ENST00000485140 BACH1O14867 736 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 IL2RAP01589 272 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 MAP3K10Q02779 954 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 POU4F2Q12837 409 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 RIPOR1Q6ZS17 1223 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 RHBDD1Q8TEB9 315 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 CNTNAP3BQ96NU0 1288 aa7.66□□□□□ -1.18
VPS50-217ENST00000485140 CNTNAP3Q9BZ76 1288 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms