RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 ITGBL1O95965 494 aaPredicted RBP3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 SRPK2P78362 688 aaKnown RBP3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 NBPF1Q3BBV0 1214 aa3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 C6orf132Q5T0Z8 1188 aa3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 Q6ZNB5 142 aa3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 NGDNQ8NEJ9 315 aaKnown RBP3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 ZFRQ96KR1 1074 aaKnown RBP3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 TULP4Q9NRJ4 1543 aa3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 ATAD2Q6PL18 1390 aa3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 SBNO2Q9Y2G9 1366 aa3.63□□□□□ -1.83
SHROOM4-205ENST00000484922 AHDC1Q5TGY3 1603 aaPredicted RBP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 SHPRHQ149N8 1683 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 C1orf167Q5SNV9 1468 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 EIF4G2P78344 907 aaKnown RBP eCLIP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 TMF1P82094 1093 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 KCNC4Q03721 635 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 MFSD10Q14728 455 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 NBPF8Q3BBV2 869 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 AMER1Q5JTC6 1135 aaPredicted RBP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 TYW1BQ6NUM6 668 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 BRINP3Q76B58 766 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 PUS7Q96PZ0 661 aaKnown RBP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 HIRIP3Q9BW71 556 aaPredicted RBP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 CDK19Q9BWU1 502 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 RYDENQ9NUL5 291 aaKnown RBP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 BRD4O60885 1362 aaPredicted RBP3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 JCADQ9P266 1359 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 PLEKHH1Q9ULM0 1364 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 TOPAZ1Q8N9V7 1692 aa3.62□□□□□ -1.83
SHROOM4-205ENST00000484922 MARF1Q9Y4F3 1742 aaKnown RBP3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 NUTM2FA1L443 756 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 LCE2BO14633 110 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 PHF14O94880 888 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 HSPA1LP34931 641 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 HAP1P54257 671 aaPredicted RBP3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 HDGFL2Q7Z4V5 671 aaPredicted RBP3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 LAPTM4BQ86VI4 370 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 NUDT16Q96DE0 195 aaKnown RBP3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 TERF2IPQ9NYB0 399 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 COL16A1Q07092 1604 aaPredicted RBP3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 SPATA31A6Q5VVP1 1343 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 ARHGEF10O15013 1369 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 USP47Q96K76 1375 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 NINLQ9Y2I6 1382 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 AKAP12Q02952 1782 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 PPIP5K1Q6PFW1 1433 aa3.61□□□□□ -1.83
SHROOM4-205ENST00000484922 USP32Q8NFA0 1604 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 ST20-MTHFSA0A0A6YYL1 179 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 DPYSL4O14531 572 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 FOXO3O43524 673 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 MEX3CQ5U5Q3 659 aaKnown RBP3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 LMOD2Q6P5Q4 547 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 KRT28Q7Z3Y7 464 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 PMFBP1Q8TBY8 1022 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 DDX12PQ92771 950 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 FBXW7Q969H0 707 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 ORAI2Q96SN7 254 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 SOS2Q07890 1332 aaPredicted RBP3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 SBNO1A3KN83 1393 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 ATP7BP35670 1465 aa3.6□□□□□ -1.83
SHROOM4-205ENST00000484922 COL22A1Q8NFW1 1626 aaPredicted RBP3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 MON2Q7Z3U7 1717 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 PLEKHG3A1L390 1219 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 TRIM6-TRIM34B2RNG4 842 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 GFRA3O60609 400 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 NLRP13Q86W25 1043 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 TMC1Q8TDI8 760 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 HPS5Q9UPZ3 1129 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 ACEP12821 1306 aa3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 POLR3AO14802 1390 aaPredicted RBP3.59□□□□□ -1.83
SHROOM4-205ENST00000484922 TNS3Q68CZ2 1445 aa3.59□□□□□ -1.84
SHROOM4-205ENST00000484922 ALS2Q96Q42 1657 aa3.59□□□□□ -1.84
SHROOM4-205ENST00000484922 TRPM3Q9HCF6 1732 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 NUTM2BA6NNL0 878 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 NUTM2EB1AL46 878 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 C3orf80F5H4A9 247 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 SMAPO00193 183 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 ONECUT3O60422 494 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 FAM98CQ17RN3 349 aaKnown RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 TSR1Q2NL82 804 aaKnown RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 ZNF772Q68DY9 489 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 TRAF7Q6Q0C0 670 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 NUTM2AQ8IVF1 878 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 ABTB2Q8N961 1025 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 POLR3GLQ9BT43 218 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 CABP1Q9NZU7 370 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 TSR3Q9UJK0 312 aaKnown RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 TSKSQ9UJT2 592 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 SPATA31A3Q5VYP0 1347 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 TTC21AQ8NDW8 1320 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 PRR36Q9H6K5 1346 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 KTN1Q86UP2 1357 aaKnown RBP3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 PXDNQ92626 1479 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 KIF20BQ96Q89 1820 aa3.58□□□□□ -1.84
SHROOM4-205ENST00000484922 HSPA5P11021 654 aaKnown RBP3.57□□□□□ -1.84
SHROOM4-205ENST00000484922 USP6P35125 1406 aa3.57□□□□□ -1.84
SHROOM4-205ENST00000484922 PPP4CP60510 307 aa3.57□□□□□ -1.84
SHROOM4-205ENST00000484922 XPCQ01831 940 aaPredicted RBP3.57□□□□□ -1.84
SHROOM4-205ENST00000484922 CAMK2BQ13554 666 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms