RNA–Protein interactions for RNA: ENST00000484814.1

YIF1A-207, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-207ENST00000484814 FBLN1P23142 703 aa29.8■■■□□ 2.36
YIF1A-207ENST00000484814 DDX54Q8TDD1 881 aaKnown RBP29.8■■■□□ 2.36
YIF1A-207ENST00000484814 RTL1A6NKG5 1358 aa29.78■■■□□ 2.36
YIF1A-207ENST00000484814 ST20-MTHFSA0A0A6YYL1 179 aa29.78■■■□□ 2.36
YIF1A-207ENST00000484814 LTV1Q96GA3 475 aaPredicted RBP29.78■■■□□ 2.36
YIF1A-207ENST00000484814 COG3Q96JB2 828 aa29.77■■■□□ 2.36
YIF1A-207ENST00000484814 PRIM1P49642 420 aaKnown RBP29.76■■■□□ 2.35
YIF1A-207ENST00000484814 KCNQ4P56696 695 aa29.74■■■□□ 2.35
YIF1A-207ENST00000484814 ZCRB1Q8TBF4 217 aaKnown RBP29.73■■■□□ 2.35
YIF1A-207ENST00000484814 NBPF6Q5VWK0 638 aa29.71■■■□□ 2.35
YIF1A-207ENST00000484814 NBPF4Q96M43 638 aa29.71■■■□□ 2.35
YIF1A-207ENST00000484814 FYB1O15117 783 aa29.7■■■□□ 2.35
YIF1A-207ENST00000484814 AMPHP49418 695 aa29.7■■■□□ 2.35
YIF1A-207ENST00000484814 SLC24A1O60721 1099 aa29.68■■■□□ 2.34
YIF1A-207ENST00000484814 SYTL4Q96C24 671 aaPredicted RBP29.67■■■□□ 2.34
YIF1A-207ENST00000484814 CGNL1Q0VF96 1302 aa29.67■■■□□ 2.34
YIF1A-207ENST00000484814 RRS1Q15050 365 aaKnown RBP29.66■■■□□ 2.34
YIF1A-207ENST00000484814 TFCP2L1Q9NZI6 479 aa29.66■■■□□ 2.34
YIF1A-207ENST00000484814 TAF1LQ8IZX4 1826 aa29.64■■■□□ 2.34
YIF1A-207ENST00000484814 C5P01031 1676 aa29.64■■■□□ 2.34
YIF1A-207ENST00000484814 POLD1P28340 1107 aa29.64■■■□□ 2.34
YIF1A-207ENST00000484814 NLGN2Q8NFZ4 835 aa29.64■■■□□ 2.34
YIF1A-207ENST00000484814 KIF20BQ96Q89 1820 aa29.64■■■□□ 2.33
YIF1A-207ENST00000484814 CCNL1Q9UK58 526 aaPredicted RBP29.63■■■□□ 2.33
YIF1A-207ENST00000484814 INSRP06213 1382 aa29.63■■■□□ 2.33
YIF1A-207ENST00000484814 TOGARAM1Q9Y4F4 1720 aa29.62■■■□□ 2.33
YIF1A-207ENST00000484814 GGNBP2Q9H3C7 697 aa29.62■■■□□ 2.33
YIF1A-207ENST00000484814 KIF24Q5T7B8 1368 aa29.62■■■□□ 2.33
YIF1A-207ENST00000484814 NCAPD2Q15021 1401 aa29.62■■■□□ 2.33
YIF1A-207ENST00000484814 GPR162Q16538 588 aa29.61■■■□□ 2.33
YIF1A-207ENST00000484814 COL23A1Q86Y22 540 aaPredicted RBP29.61■■■□□ 2.33
YIF1A-207ENST00000484814 USHBP1Q8N6Y0 703 aa29.61■■■□□ 2.33
YIF1A-207ENST00000484814 C1QTNF8P60827 252 aa29.6■■■□□ 2.33
YIF1A-207ENST00000484814 USP47Q96K76 1375 aa29.6■■■□□ 2.33
YIF1A-207ENST00000484814 PKD1L3Q7Z443 1732 aa29.59■■■□□ 2.33
YIF1A-207ENST00000484814 HSP90AB2PQ58FF8 381 aa29.58■■■□□ 2.33
YIF1A-207ENST00000484814 CEP350Q5VT06 3117 aa29.58■■■□□ 2.33
YIF1A-207ENST00000484814 ANKRD26Q9UPS8 1709 aa29.57■■■□□ 2.32
YIF1A-207ENST00000484814 SMG6Q86US8 1419 aaKnown RBP29.57■■■□□ 2.32
YIF1A-207ENST00000484814 FLT4P35916 1363 aa29.57■■■□□ 2.32
YIF1A-207ENST00000484814 ITGB4P16144 1822 aa29.57■■■□□ 2.32
YIF1A-207ENST00000484814 CYP27B1O15528 508 aa29.55■■■□□ 2.32
YIF1A-207ENST00000484814 YBX3P16989 372 aaKnown RBP eCLIP29.55■■■□□ 2.324e-6■□□□□ 10.1
YIF1A-207ENST00000484814 RAPGEF4Q8WZA2 1011 aa29.55■■■□□ 2.32
YIF1A-207ENST00000484814 PCDH11XQ9BZA7 1347 aa29.54■■■□□ 2.32
YIF1A-207ENST00000484814 PCDH11YQ9BZA8 1340 aa29.54■■■□□ 2.32
YIF1A-207ENST00000484814 TMF1P82094 1093 aa29.54■■■□□ 2.32
YIF1A-207ENST00000484814 MAP2P11137 1827 aaKnown RBP29.53■■■□□ 2.32
YIF1A-207ENST00000484814 KLHL34Q8N239 644 aa29.53■■■□□ 2.32
YIF1A-207ENST00000484814 TATP17735 454 aaPredicted RBP29.52■■■□□ 2.32
YIF1A-207ENST00000484814 PALLDQ8WX93 1383 aa29.52■■■□□ 2.32
YIF1A-207ENST00000484814 C4BP0C0L5 1744 aa29.51■■■□□ 2.32
YIF1A-207ENST00000484814 CARD14Q9BXL6 1004 aa29.51■■■□□ 2.31
YIF1A-207ENST00000484814 PCGF6Q9BYE7 350 aa29.51■■■□□ 2.31
YIF1A-207ENST00000484814 UBR3Q6ZT12 1888 aa29.51■■■□□ 2.31
YIF1A-207ENST00000484814 AMIGO3Q86WK7 504 aa29.48■■■□□ 2.31
YIF1A-207ENST00000484814 SENP3-EIF4A1A0A087X0R7 540 aa29.47■■■□□ 2.31
YIF1A-207ENST00000484814 NKX1-1Q15270 411 aaPredicted RBP29.46■■■□□ 2.31
YIF1A-207ENST00000484814 MSL1Q68DK7 614 aa29.46■■■□□ 2.31
YIF1A-207ENST00000484814 EMILIN1Q9Y6C2 1016 aa29.46■■■□□ 2.31
YIF1A-207ENST00000484814 PELP1Q8IZL8 1130 aaKnown RBP29.45■■■□□ 2.31
YIF1A-207ENST00000484814 GRIN3BO60391 1043 aa29.44■■■□□ 2.3
YIF1A-207ENST00000484814 FLAD1Q8NFF5 587 aa29.44■■■□□ 2.3
YIF1A-207ENST00000484814 CD2APQ9Y5K6 639 aa29.44■■■□□ 2.3
YIF1A-207ENST00000484814 NSD3Q9BZ95 1437 aa29.44■■■□□ 2.3
YIF1A-207ENST00000484814 GIGYF1O75420 1035 aaPredicted RBP29.42■■■□□ 2.3
YIF1A-207ENST00000484814 MPRIPQ6WCQ1 1025 aa29.42■■■□□ 2.3
YIF1A-207ENST00000484814 MSH5O43196 834 aa29.41■■■□□ 2.3
YIF1A-207ENST00000484814 CDCA8Q53HL2 280 aa29.41■■■□□ 2.3
YIF1A-207ENST00000484814 PIGBQ92521 554 aa29.41■■■□□ 2.3
YIF1A-207ENST00000484814 HMGB2P26583 209 aaKnown RBP29.4■■■□□ 2.3
YIF1A-207ENST00000484814 ADCY9O60503 1353 aa29.39■■■□□ 2.3
YIF1A-207ENST00000484814 SMARCC1Q92922 1105 aaPredicted RBP29.39■■■□□ 2.3
YIF1A-207ENST00000484814 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.3
YIF1A-207ENST00000484814 WASHC2AQ641Q2 1341 aa29.38■■■□□ 2.29
YIF1A-207ENST00000484814 CLSPNQ9HAW4 1339 aa29.37■■■□□ 2.29
YIF1A-207ENST00000484814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.36■■■□□ 2.29
YIF1A-207ENST00000484814 ATP10DQ9P241 1426 aa29.36■■■□□ 2.29
YIF1A-207ENST00000484814 EYA1Q99502 592 aa29.34■■■□□ 2.29
YIF1A-207ENST00000484814 SMIM5Q71RC9 77 aa29.33■■■□□ 2.29
YIF1A-207ENST00000484814 PLEKHG2Q9H7P9 1386 aa29.32■■■□□ 2.28
YIF1A-207ENST00000484814 LINC00116Q8NCU8 138 aa29.32■■■□□ 2.28
YIF1A-207ENST00000484814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.31■■■□□ 2.28
YIF1A-207ENST00000484814 LOC102724428A0A0B4J2F2 783 aa29.31■■■□□ 2.28
YIF1A-207ENST00000484814 SSFA2P28290 1259 aa29.31■■■□□ 2.28
YIF1A-207ENST00000484814 SIK1P57059 783 aa29.31■■■□□ 2.28
YIF1A-207ENST00000484814 AK7Q96M32 723 aa29.31■■■□□ 2.28
YIF1A-207ENST00000484814 POLKQ9UBT6 870 aa29.3■■■□□ 2.28
YIF1A-207ENST00000484814 SPG7Q9UQ90 795 aa29.3■■■□□ 2.28
YIF1A-207ENST00000484814 ZNF831Q5JPB2 1677 aa29.29■■■□□ 2.28
YIF1A-207ENST00000484814 ITPK1Q13572 414 aa29.29■■■□□ 2.28
YIF1A-207ENST00000484814 KIAA1551Q9HCM1 1747 aa29.28■■■□□ 2.28
YIF1A-207ENST00000484814 CICQ96RK0 1608 aaPredicted RBP29.28■■■□□ 2.28
YIF1A-207ENST00000484814 KIF13BQ9NQT8 1826 aa29.28■■■□□ 2.28
YIF1A-207ENST00000484814 KDRP35968 1356 aa29.27■■■□□ 2.28
YIF1A-207ENST00000484814 PHKG2P15735 406 aa29.27■■■□□ 2.28
YIF1A-207ENST00000484814 ASAP1Q9ULH1 1129 aa29.27■■■□□ 2.28
YIF1A-207ENST00000484814 IGSF1Q8N6C5 1336 aa29.25■■■□□ 2.27
YIF1A-207ENST00000484814 PHF14O94880 888 aa29.25■■■□□ 2.27
YIF1A-207ENST00000484814 PPM1GO15355 546 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms