RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZBTB7AO95365 584 aa15.95■□□□□ 0.14
SCFD1-206ENST00000484733 FLT4P35916 1363 aa15.95■□□□□ 0.14
SCFD1-206ENST00000484733 QSER1Q2KHR3 1735 aa15.95■□□□□ 0.14
SCFD1-206ENST00000484733 LRRC4BQ9NT99 713 aa15.94■□□□□ 0.14
SCFD1-206ENST00000484733 DOT1LQ8TEK3 1739 aa15.94■□□□□ 0.14
SCFD1-206ENST00000484733 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
SCFD1-206ENST00000484733 NSD2O96028 1365 aa15.93■□□□□ 0.14
SCFD1-206ENST00000484733 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
SCFD1-206ENST00000484733 SGIP1Q9BQI5 828 aa15.93■□□□□ 0.14
SCFD1-206ENST00000484733 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
SCFD1-206ENST00000484733 LY75O60449 1722 aa15.93■□□□□ 0.14
SCFD1-206ENST00000484733 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
SCFD1-206ENST00000484733 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
SCFD1-206ENST00000484733 KAT6BQ8WYB5 2073 aa15.92■□□□□ 0.14
SCFD1-206ENST00000484733 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
SCFD1-206ENST00000484733 RAPGEF4Q8WZA2 1011 aa15.92■□□□□ 0.14
SCFD1-206ENST00000484733 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
SCFD1-206ENST00000484733 ANKRD26Q9UPS8 1709 aa15.91■□□□□ 0.14
SCFD1-206ENST00000484733 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
SCFD1-206ENST00000484733 NCAPD2Q15021 1401 aa15.9■□□□□ 0.14
SCFD1-206ENST00000484733 USHBP1Q8N6Y0 703 aa15.9■□□□□ 0.14
SCFD1-206ENST00000484733 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
SCFD1-206ENST00000484733 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
SCFD1-206ENST00000484733 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
SCFD1-206ENST00000484733 SYTL4Q96C24 671 aaPredicted RBP15.88■□□□□ 0.13
SCFD1-206ENST00000484733 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
SCFD1-206ENST00000484733 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
SCFD1-206ENST00000484733 EMILIN1Q9Y6C2 1016 aa15.88■□□□□ 0.13
SCFD1-206ENST00000484733 MAP3K5Q99683 1374 aa15.88■□□□□ 0.13
SCFD1-206ENST00000484733 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
SCFD1-206ENST00000484733 PKD1L3Q7Z443 1732 aa15.87■□□□□ 0.13
SCFD1-206ENST00000484733 HMGB2P26583 209 aaKnown RBP15.86■□□□□ 0.13
SCFD1-206ENST00000484733 SYT17Q9BSW7 474 aa15.86■□□□□ 0.13
SCFD1-206ENST00000484733 YY1P25490 414 aa15.86■□□□□ 0.13
SCFD1-206ENST00000484733 ARXQ96QS3 562 aa15.86■□□□□ 0.13
SCFD1-206ENST00000484733 MAP2P11137 1827 aaKnown RBP15.86■□□□□ 0.13
SCFD1-206ENST00000484733 TUBGCP6Q96RT7 1819 aa15.86■□□□□ 0.13
SCFD1-206ENST00000484733 FHDC1Q9C0D6 1143 aaPredicted RBP15.85■□□□□ 0.13
SCFD1-206ENST00000484733 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
SCFD1-206ENST00000484733 EIF4G2P78344 907 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCFD1-206ENST00000484733 CCNL1Q9UK58 526 aaPredicted RBP15.84■□□□□ 0.13
SCFD1-206ENST00000484733 CYP27B1O15528 508 aa15.84■□□□□ 0.13
SCFD1-206ENST00000484733 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
SCFD1-206ENST00000484733 TFCP2L1Q9NZI6 479 aa15.83■□□□□ 0.12
SCFD1-206ENST00000484733 POLKQ9UBT6 870 aa15.83■□□□□ 0.12
SCFD1-206ENST00000484733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.83■□□□□ 0.122e-8■■■□□ 14.9
SCFD1-206ENST00000484733 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
SCFD1-206ENST00000484733 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
SCFD1-206ENST00000484733 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
SCFD1-206ENST00000484733 TOGARAM1Q9Y4F4 1720 aa15.81■□□□□ 0.12
SCFD1-206ENST00000484733 ITGB4P16144 1822 aa15.81■□□□□ 0.12
SCFD1-206ENST00000484733 KCNQ4P56696 695 aa15.81■□□□□ 0.12
SCFD1-206ENST00000484733 EYA1Q99502 592 aa15.81■□□□□ 0.12
SCFD1-206ENST00000484733 POLD1P28340 1107 aa15.8■□□□□ 0.12
SCFD1-206ENST00000484733 SMARCC1Q92922 1105 aaPredicted RBP15.8■□□□□ 0.12
SCFD1-206ENST00000484733 C5P01031 1676 aa15.8■□□□□ 0.12
SCFD1-206ENST00000484733 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
SCFD1-206ENST00000484733 TAF1LQ8IZX4 1826 aa15.79■□□□□ 0.12
SCFD1-206ENST00000484733 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
SCFD1-206ENST00000484733 MPRIPQ6WCQ1 1025 aa15.78■□□□□ 0.12
SCFD1-206ENST00000484733 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
SCFD1-206ENST00000484733 PANK3Q9H999 370 aa15.78■□□□□ 0.12
SCFD1-206ENST00000484733 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.12
SCFD1-206ENST00000484733 COL23A1Q86Y22 540 aaPredicted RBP15.77■□□□□ 0.12
SCFD1-206ENST00000484733 FLAD1Q8NFF5 587 aa15.77■□□□□ 0.12
SCFD1-206ENST00000484733 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
SCFD1-206ENST00000484733 PIGBQ92521 554 aa15.76■□□□□ 0.11
SCFD1-206ENST00000484733 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
SCFD1-206ENST00000484733 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
SCFD1-206ENST00000484733 PHKG2P15735 406 aa15.74■□□□□ 0.11
SCFD1-206ENST00000484733 CHD4Q14839 1912 aa15.74■□□□□ 0.11
SCFD1-206ENST00000484733 C4BP0C0L5 1744 aa15.74■□□□□ 0.11
SCFD1-206ENST00000484733 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-206ENST00000484733 TMOD3Q9NYL9 352 aa15.72■□□□□ 0.11
SCFD1-206ENST00000484733 MSH5O43196 834 aa15.71■□□□□ 0.11
SCFD1-206ENST00000484733 UBR3Q6ZT12 1888 aa15.71■□□□□ 0.11
SCFD1-206ENST00000484733 MORC1Q86VD1 984 aa15.71■□□□□ 0.1
SCFD1-206ENST00000484733 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
SCFD1-206ENST00000484733 SIK1P57059 783 aa15.7■□□□□ 0.1
SCFD1-206ENST00000484733 AK7Q96M32 723 aa15.7■□□□□ 0.1
SCFD1-206ENST00000484733 HSP90AB1P08238 724 aaKnown RBP15.69■□□□□ 0.1
SCFD1-206ENST00000484733 GPR162Q16538 588 aa15.69■□□□□ 0.1
SCFD1-206ENST00000484733 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
SCFD1-206ENST00000484733 ERVV-2B6SEH9 535 aa15.69■□□□□ 0.1
SCFD1-206ENST00000484733 PLEKHO1Q53GL0 409 aaPredicted RBP15.69■□□□□ 0.1
SCFD1-206ENST00000484733 SSFA2P28290 1259 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 ZNF784Q8NCA9 323 aaPredicted RBP15.68■□□□□ 0.1
SCFD1-206ENST00000484733 NLGN2Q8NFZ4 835 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
SCFD1-206ENST00000484733 LINC00116Q8NCU8 138 aa15.67■□□□□ 0.1
SCFD1-206ENST00000484733 DCAF5Q96JK2 942 aa15.67■□□□□ 0.1
SCFD1-206ENST00000484733 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
SCFD1-206ENST00000484733 KDRP35968 1356 aa15.66■□□□□ 0.1
SCFD1-206ENST00000484733 ITPK1Q13572 414 aa15.66■□□□□ 0.1
SCFD1-206ENST00000484733 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms