RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 MSH5O43196 834 aa21.71■■□□□ 1.07
HLA-DQB1-208ENST00000484729 HDGFL2Q7Z4V5 671 aaPredicted RBP21.71■■□□□ 1.07
HLA-DQB1-208ENST00000484729 IP6K1Q92551 441 aa21.71■■□□□ 1.07
HLA-DQB1-208ENST00000484729 NSD2O96028 1365 aa21.7■■□□□ 1.06
HLA-DQB1-208ENST00000484729 ANKRD36BQ8N2N9 1353 aa21.7■■□□□ 1.06
HLA-DQB1-208ENST00000484729 EDC4Q6P2E9 1401 aaKnown RBP21.69■■□□□ 1.06
HLA-DQB1-208ENST00000484729 DOT1LQ8TEK3 1739 aa21.69■■□□□ 1.06
HLA-DQB1-208ENST00000484729 GRIN3BO60391 1043 aa21.68■■□□□ 1.06
HLA-DQB1-208ENST00000484729 MSL1Q68DK7 614 aa21.68■■□□□ 1.06
HLA-DQB1-208ENST00000484729 COL23A1Q86Y22 540 aaPredicted RBP21.68■■□□□ 1.06
HLA-DQB1-208ENST00000484729 CCNL1Q9UK58 526 aaPredicted RBP21.68■■□□□ 1.06
HLA-DQB1-208ENST00000484729 LY75O60449 1722 aa21.67■■□□□ 1.06
HLA-DQB1-208ENST00000484729 A0A1W2PP64 1363 aa21.66■■□□□ 1.06
HLA-DQB1-208ENST00000484729 FBLN1P23142 703 aa21.66■■□□□ 1.06
HLA-DQB1-208ENST00000484729 ZCRB1Q8TBF4 217 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-208ENST00000484729 ATP10DQ9P241 1426 aa21.64■■□□□ 1.06
HLA-DQB1-208ENST00000484729 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
HLA-DQB1-208ENST00000484729 FAM208AQ9UK61 1670 aaKnown RBP21.63■■□□□ 1.05
HLA-DQB1-208ENST00000484729 MAP3K19Q56UN5 1328 aa21.63■■□□□ 1.05
HLA-DQB1-208ENST00000484729 MEGF6O75095 1541 aa21.62■■□□□ 1.05
HLA-DQB1-208ENST00000484729 HOXC9P31274 260 aa21.62■■□□□ 1.05
HLA-DQB1-208ENST00000484729 USP47Q96K76 1375 aa21.61■■□□□ 1.05
HLA-DQB1-208ENST00000484729 RGPD2P0DJD1 1756 aa21.61■■□□□ 1.05
HLA-DQB1-208ENST00000484729 AMPHP49418 695 aa21.61■■□□□ 1.05
HLA-DQB1-208ENST00000484729 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
HLA-DQB1-208ENST00000484729 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
HLA-DQB1-208ENST00000484729 COG3Q96JB2 828 aa21.58■■□□□ 1.05
HLA-DQB1-208ENST00000484729 GPBP1L1Q9HC44 474 aaPredicted RBP21.58■■□□□ 1.05
HLA-DQB1-208ENST00000484729 NBPF6Q5VWK0 638 aa21.57■■□□□ 1.04
HLA-DQB1-208ENST00000484729 NBPF4Q96M43 638 aa21.57■■□□□ 1.04
HLA-DQB1-208ENST00000484729 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
HLA-DQB1-208ENST00000484729 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
HLA-DQB1-208ENST00000484729 TRIM26Q12899 539 aaPredicted RBP21.54■■□□□ 1.04
HLA-DQB1-208ENST00000484729 C5P01031 1676 aa21.53■■□□□ 1.04
HLA-DQB1-208ENST00000484729 ADCY9O60503 1353 aa21.53■■□□□ 1.04
HLA-DQB1-208ENST00000484729 HSPA6P17066 643 aa21.53■■□□□ 1.04
HLA-DQB1-208ENST00000484729 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
HLA-DQB1-208ENST00000484729 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
HLA-DQB1-208ENST00000484729 ST20-MTHFSA0A0A6YYL1 179 aa21.52■■□□□ 1.04
HLA-DQB1-208ENST00000484729 AMIGO3Q86WK7 504 aa21.52■■□□□ 1.04
HLA-DQB1-208ENST00000484729 PUS7Q96PZ0 661 aaKnown RBP21.52■■□□□ 1.04
HLA-DQB1-208ENST00000484729 PALLDQ8WX93 1383 aa21.51■■□□□ 1.03
HLA-DQB1-208ENST00000484729 RAPGEF4Q8WZA2 1011 aa21.51■■□□□ 1.03
HLA-DQB1-208ENST00000484729 TESK2Q96S53 571 aa21.51■■□□□ 1.03
HLA-DQB1-208ENST00000484729 MPRIPQ6WCQ1 1025 aa21.5■■□□□ 1.03
HLA-DQB1-208ENST00000484729 FLAD1Q8NFF5 587 aa21.5■■□□□ 1.03
HLA-DQB1-208ENST00000484729 PHF14O94880 888 aa21.48■■□□□ 1.03
HLA-DQB1-208ENST00000484729 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
HLA-DQB1-208ENST00000484729 CGNL1Q0VF96 1302 aa21.48■■□□□ 1.03
HLA-DQB1-208ENST00000484729 IGSF1Q8N6C5 1336 aa21.48■■□□□ 1.03
HLA-DQB1-208ENST00000484729 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
HLA-DQB1-208ENST00000484729 RTL1A6NKG5 1358 aa21.48■■□□□ 1.03
HLA-DQB1-208ENST00000484729 AK7Q96M32 723 aa21.47■■□□□ 1.03
HLA-DQB1-208ENST00000484729 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
HLA-DQB1-208ENST00000484729 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
HLA-DQB1-208ENST00000484729 CYP27B1O15528 508 aa21.45■■□□□ 1.02
HLA-DQB1-208ENST00000484729 SLC24A1O60721 1099 aa21.45■■□□□ 1.02
HLA-DQB1-208ENST00000484729 PCDH11XQ9BZA7 1347 aa21.45■■□□□ 1.02
HLA-DQB1-208ENST00000484729 PCDH11YQ9BZA8 1340 aa21.45■■□□□ 1.02
HLA-DQB1-208ENST00000484729 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
HLA-DQB1-208ENST00000484729 HSP90AB2PQ58FF8 381 aa21.44■■□□□ 1.02
HLA-DQB1-208ENST00000484729 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
HLA-DQB1-208ENST00000484729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.43■■□□□ 1.02
HLA-DQB1-208ENST00000484729 KIF3CO14782 793 aa21.43■■□□□ 1.02
HLA-DQB1-208ENST00000484729 FYB1O15117 783 aa21.43■■□□□ 1.02
HLA-DQB1-208ENST00000484729 TMF1P82094 1093 aa21.41■■□□□ 1.02
HLA-DQB1-208ENST00000484729 PIGBQ92521 554 aa21.41■■□□□ 1.02
HLA-DQB1-208ENST00000484729 SMARCC1Q92922 1105 aaPredicted RBP21.41■■□□□ 1.02
HLA-DQB1-208ENST00000484729 HMGB2P26583 209 aaKnown RBP21.4■■□□□ 1.02
HLA-DQB1-208ENST00000484729 UBR3Q6ZT12 1888 aa21.4■■□□□ 1.02
HLA-DQB1-208ENST00000484729 INSRP06213 1382 aa21.39■■□□□ 1.02
HLA-DQB1-208ENST00000484729 ITGB4P16144 1822 aa21.39■■□□□ 1.02
HLA-DQB1-208ENST00000484729 LINC00116Q8NCU8 138 aa21.39■■□□□ 1.01
HLA-DQB1-208ENST00000484729 LOC102724428A0A0B4J2F2 783 aa21.36■■□□□ 1.01
HLA-DQB1-208ENST00000484729 SSFA2P28290 1259 aa21.36■■□□□ 1.01
HLA-DQB1-208ENST00000484729 SIK1P57059 783 aa21.36■■□□□ 1.01
HLA-DQB1-208ENST00000484729 FLT4P35916 1363 aa21.36■■□□□ 1.01
HLA-DQB1-208ENST00000484729 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
HLA-DQB1-208ENST00000484729 GNPATO15228 680 aa21.34■■□□□ 1.01
HLA-DQB1-208ENST00000484729 ITPK1Q13572 414 aa21.34■■□□□ 1.01
HLA-DQB1-208ENST00000484729 CDCA8Q53HL2 280 aa21.33■■□□□ 1.01
HLA-DQB1-208ENST00000484729 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
HLA-DQB1-208ENST00000484729 EMILIN1Q9Y6C2 1016 aa21.33■■□□□ 1.01
HLA-DQB1-208ENST00000484729 MAP2P11137 1827 aaKnown RBP21.33■■□□□ 1.01
HLA-DQB1-208ENST00000484729 MMP10P09238 476 aa21.32■■□□□ 1
HLA-DQB1-208ENST00000484729 APLP1P51693 650 aa21.32■■□□□ 1
HLA-DQB1-208ENST00000484729 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
HLA-DQB1-208ENST00000484729 PKD1L3Q7Z443 1732 aa21.32■■□□□ 1
HLA-DQB1-208ENST00000484729 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
HLA-DQB1-208ENST00000484729 PXDNLA1KZ92 1463 aa21.31■■□□□ 1
HLA-DQB1-208ENST00000484729 A0A0G2JLW4 131 aa21.3■■□□□ 1
HLA-DQB1-208ENST00000484729 ATP6V1AP38606 617 aa21.3■■□□□ 1
HLA-DQB1-208ENST00000484729 DNAJC5GQ8N7S2 189 aa21.3■■□□□ 1
HLA-DQB1-208ENST00000484729 TMOD3Q9NYL9 352 aa21.3■■□□□ 1
HLA-DQB1-208ENST00000484729 SPG7Q9UQ90 795 aa21.3■■□□□ 1
HLA-DQB1-208ENST00000484729 BCS1LQ9Y276 419 aa21.3■■□□□ 1
HLA-DQB1-208ENST00000484729 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
HLA-DQB1-208ENST00000484729 N4BP2Q86UW6 1770 aaPredicted RBP21.28■■□□□ 1
HLA-DQB1-208ENST00000484729 KIF24Q5T7B8 1368 aa21.28■■□□□ 1
HLA-DQB1-208ENST00000484729 KIF20BQ96Q89 1820 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms