RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
UBR3-210ENST00000484596 SCTRP47872 440 aa13.24□□□□□ -0.29
UBR3-210ENST00000484596 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
UBR3-210ENST00000484596 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBR3-210ENST00000484596 INSM1Q01101 510 aaPredicted RBP13.23□□□□□ -0.29
UBR3-210ENST00000484596 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
UBR3-210ENST00000484596 VSIG8P0DPA2 414 aa13.22□□□□□ -0.29
UBR3-210ENST00000484596 VAC14Q08AM6 782 aa13.22□□□□□ -0.29
UBR3-210ENST00000484596 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
UBR3-210ENST00000484596 A0A1W2PRU2 124 aa13.19□□□□□ -0.3
UBR3-210ENST00000484596 RAD21O60216 631 aa13.19□□□□□ -0.3
UBR3-210ENST00000484596 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
UBR3-210ENST00000484596 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
UBR3-210ENST00000484596 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
UBR3-210ENST00000484596 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
UBR3-210ENST00000484596 MEN1O00255 615 aa13.17□□□□□ -0.3
UBR3-210ENST00000484596 TRAK2O60296 914 aa13.17□□□□□ -0.3
UBR3-210ENST00000484596 RNF144AP50876 292 aaPredicted RBP13.17□□□□□ -0.3
UBR3-210ENST00000484596 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
UBR3-210ENST00000484596 PHTF2Q8N3S3 785 aa13.17□□□□□ -0.3
UBR3-210ENST00000484596 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
UBR3-210ENST00000484596 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
UBR3-210ENST00000484596 A6NJR5 290 aa13.16□□□□□ -0.3
UBR3-210ENST00000484596 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
UBR3-210ENST00000484596 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
UBR3-210ENST00000484596 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
UBR3-210ENST00000484596 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
UBR3-210ENST00000484596 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
UBR3-210ENST00000484596 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
UBR3-210ENST00000484596 GPC1P35052 558 aa13.12□□□□□ -0.31
UBR3-210ENST00000484596 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
UBR3-210ENST00000484596 GPR161Q8N6U8 529 aaKnown RBP13.12□□□□□ -0.31
UBR3-210ENST00000484596 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
UBR3-210ENST00000484596 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
UBR3-210ENST00000484596 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
UBR3-210ENST00000484596 ITGA6P23229 1130 aa13.11□□□□□ -0.31
UBR3-210ENST00000484596 LORP23490 312 aaPredicted RBP13.11□□□□□ -0.31
UBR3-210ENST00000484596 CLN3Q13286 438 aa13.11□□□□□ -0.31
UBR3-210ENST00000484596 NANOS1Q8WY41 292 aaKnown RBP13.11□□□□□ -0.31
UBR3-210ENST00000484596 POM121Q96HA1 1249 aa13.11□□□□□ -0.31
UBR3-210ENST00000484596 NLRP3Q96P20 1036 aa13.11□□□□□ -0.31
UBR3-210ENST00000484596 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
UBR3-210ENST00000484596 RHOQP17081 205 aa13.1□□□□□ -0.31
UBR3-210ENST00000484596 WWC1Q8IX03 1113 aa13.1□□□□□ -0.31
UBR3-210ENST00000484596 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
UBR3-210ENST00000484596 RAB6BQ9NRW1 208 aa13.09□□□□□ -0.31
UBR3-210ENST00000484596 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
UBR3-210ENST00000484596 GNRH1P01148 92 aa13.08□□□□□ -0.32
UBR3-210ENST00000484596 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
UBR3-210ENST00000484596 VWA5B2Q8N398 1253 aa13.08□□□□□ -0.32
UBR3-210ENST00000484596 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.32
UBR3-210ENST00000484596 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.32
UBR3-210ENST00000484596 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
UBR3-210ENST00000484596 SOX11P35716 441 aa13.06□□□□□ -0.32
UBR3-210ENST00000484596 USP4Q13107 963 aa13.06□□□□□ -0.32
UBR3-210ENST00000484596 CDC14CA4D256 554 aa13.05□□□□□ -0.32
UBR3-210ENST00000484596 IL2RAP01589 272 aa13.05□□□□□ -0.32
UBR3-210ENST00000484596 POU4F2Q12837 409 aa13.05□□□□□ -0.32
UBR3-210ENST00000484596 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
UBR3-210ENST00000484596 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
UBR3-210ENST00000484596 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
UBR3-210ENST00000484596 KRT76Q01546 638 aa13.04□□□□□ -0.32
UBR3-210ENST00000484596 SV2AQ7L0J3 742 aa13.04□□□□□ -0.32
UBR3-210ENST00000484596 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
UBR3-210ENST00000484596 CUEDC1Q9NWM3 386 aaPredicted RBP13.04□□□□□ -0.32
UBR3-210ENST00000484596 CENPCQ03188 943 aa13.02□□□□□ -0.33
UBR3-210ENST00000484596 PLPP7Q8NBV4 271 aa13.02□□□□□ -0.33
UBR3-210ENST00000484596 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
UBR3-210ENST00000484596 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
UBR3-210ENST00000484596 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
UBR3-210ENST00000484596 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
UBR3-210ENST00000484596 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
UBR3-210ENST00000484596 CNTNAP3BQ96NU0 1288 aa13.01□□□□□ -0.33
UBR3-210ENST00000484596 CNTNAP3Q9BZ76 1288 aa13.01□□□□□ -0.33
UBR3-210ENST00000484596 HRH3Q9Y5N1 445 aa13.01□□□□□ -0.33
UBR3-210ENST00000484596 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
UBR3-210ENST00000484596 MAP7D1Q3KQU3 841 aa13□□□□□ -0.33
UBR3-210ENST00000484596 SIRT1Q96EB6 747 aa13□□□□□ -0.33
UBR3-210ENST00000484596 ALG2Q9H553 416 aa13□□□□□ -0.33
UBR3-210ENST00000484596 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
UBR3-210ENST00000484596 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
UBR3-210ENST00000484596 RNFT1Q5M7Z0 435 aa12.99□□□□□ -0.33
UBR3-210ENST00000484596 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
UBR3-210ENST00000484596 DYRK1BQ9Y463 629 aa12.99□□□□□ -0.33
UBR3-210ENST00000484596 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
UBR3-210ENST00000484596 ETNK1Q9HBU6 452 aa12.98□□□□□ -0.33
UBR3-210ENST00000484596 FAM181BA6NEQ2 426 aa12.97□□□□□ -0.33
UBR3-210ENST00000484596 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.33
UBR3-210ENST00000484596 WDR44Q5JSH3 913 aa12.96□□□□□ -0.33
UBR3-210ENST00000484596 RIPOR1Q6ZS17 1223 aa12.96□□□□□ -0.33
UBR3-210ENST00000484596 TAS1R3Q7RTX0 852 aa12.96□□□□□ -0.33
UBR3-210ENST00000484596 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
UBR3-210ENST00000484596 GAS2L1Q99501 681 aaPredicted RBP12.96□□□□□ -0.33
UBR3-210ENST00000484596 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
UBR3-210ENST00000484596 TIMMDC1Q9NPL8 285 aa12.95□□□□□ -0.34
UBR3-210ENST00000484596 POM121CA8CG34 1229 aa12.94□□□□□ -0.34
UBR3-210ENST00000484596 DBN1Q16643 649 aa12.94□□□□□ -0.34
UBR3-210ENST00000484596 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
UBR3-210ENST00000484596 SKIP12755 728 aa12.93□□□□□ -0.34
UBR3-210ENST00000484596 ZNF837Q96EG3 531 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms