RNA–Protein interactions for RNA: ENST00000484419.1

PRKCZ-219, Transcript of protein kinase C zeta, human

TSL 2

Gene PRKCZ, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-219	ENST00000484419	FCHSD2	O94868	740 aa		33.38	■■■□□ 2.93
PRKCZ-219	ENST00000484419	SPG7	Q9UQ90	795 aa		33.38	■■■□□ 2.93
PRKCZ-219	ENST00000484419	MEGF6	O75095	1541 aa		33.38	■■■□□ 2.93
PRKCZ-219	ENST00000484419	AMOT	Q4VCS5	1084 aa		33.36	■■■□□ 2.93
PRKCZ-219	ENST00000484419	RGPD1	P0DJD0	1748 aa		33.36	■■■□□ 2.93
PRKCZ-219	ENST00000484419	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.35	■■■□□ 2.93
PRKCZ-219	ENST00000484419	TNS2	Q63HR2	1409 aa		33.34	■■■□□ 2.93
PRKCZ-219	ENST00000484419	PARP4	Q9UKK3	1724 aa	Known RBP	33.33	■■■□□ 2.93
PRKCZ-219	ENST00000484419	PNN	Q9H307	717 aa	Known RBP	33.33	■■■□□ 2.93
PRKCZ-219	ENST00000484419	MARCH10	Q8NA82	808 aa	Predicted RBP	33.32	■■■□□ 2.92
PRKCZ-219	ENST00000484419	RSPH6A	Q9H0K4	717 aa		33.32	■■■□□ 2.92
PRKCZ-219	ENST00000484419	WDR43	Q15061	677 aa	Known RBP eCLIP	33.31	■■■□□ 2.92
PRKCZ-219	ENST00000484419	FAM196A	Q6ZSG2	479 aa		33.31	■■■□□ 2.92
PRKCZ-219	ENST00000484419	DDX54	Q8TDD1	881 aa	Known RBP	33.31	■■■□□ 2.92
PRKCZ-219	ENST00000484419	CCDC184	Q52MB2	194 aa		33.3	■■■□□ 2.92
PRKCZ-219	ENST00000484419	MRS2	Q9HD23	443 aa		33.3	■■■□□ 2.92
PRKCZ-219	ENST00000484419	PCDH11X	Q9BZA7	1347 aa		33.29	■■■□□ 2.92
PRKCZ-219	ENST00000484419	PCDH11Y	Q9BZA8	1340 aa		33.29	■■■□□ 2.92
PRKCZ-219	ENST00000484419	WNK3	Q9BYP7	1800 aa		33.28	■■■□□ 2.92
PRKCZ-219	ENST00000484419	PRKAR2B	P31323	418 aa		33.27	■■■□□ 2.92
PRKCZ-219	ENST00000484419	LRRC37A3	O60309	1634 aa		33.26	■■■□□ 2.91
PRKCZ-219	ENST00000484419	IFNL2	Q8IZJ0	200 aa		33.25	■■■□□ 2.91
PRKCZ-219	ENST00000484419	CCER2	I3L3R5	266 aa		33.24	■■■□□ 2.91
PRKCZ-219	ENST00000484419	CYP27B1	O15528	508 aa		33.24	■■■□□ 2.91
PRKCZ-219	ENST00000484419	FAM182B	Q5T319	152 aa		33.24	■■■□□ 2.91
PRKCZ-219	ENST00000484419	ADAMTS8	Q9UP79	889 aa		33.24	■■■□□ 2.91
PRKCZ-219	ENST00000484419	BCL9	O00512	1426 aa		33.23	■■■□□ 2.91
PRKCZ-219	ENST00000484419	NEFM	P07197	916 aa		33.23	■■■□□ 2.91
PRKCZ-219	ENST00000484419	PNISR	Q8TF01	805 aa	Known RBP	33.23	■■■□□ 2.91
PRKCZ-219	ENST00000484419	PHKG2	P15735	406 aa		33.21	■■■□□ 2.91
PRKCZ-219	ENST00000484419	NKX1-1	Q15270	411 aa	Predicted RBP	33.21	■■■□□ 2.91
PRKCZ-219	ENST00000484419	PLEKHF1	Q96S99	279 aa		33.21	■■■□□ 2.91
PRKCZ-219	ENST00000484419	BRWD3	Q6RI45	1802 aa		33.21	■■■□□ 2.91
PRKCZ-219	ENST00000484419	MTHFSD	Q2M296	383 aa	Known RBP	33.2	■■■□□ 2.91
PRKCZ-219	ENST00000484419	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.2	■■■□□ 2.91
PRKCZ-219	ENST00000484419	GAS2L2	Q8NHY3	880 aa		33.2	■■■□□ 2.91
PRKCZ-219	ENST00000484419	PHACTR3	Q96KR7	559 aa		33.2	■■■□□ 2.91
PRKCZ-219	ENST00000484419	HSP90AB1	P08238	724 aa	Known RBP	33.19	■■■□□ 2.9
PRKCZ-219	ENST00000484419	C1orf141	Q5JVX7	400 aa		33.18	■■■□□ 2.9
PRKCZ-219	ENST00000484419	MIER1	Q8N108	512 aa		33.17	■■■□□ 2.9
PRKCZ-219	ENST00000484419	AKAP4	Q5JQC9	854 aa		33.16	■■■□□ 2.9
PRKCZ-219	ENST00000484419	CCDC125	Q86Z20	511 aa		33.15	■■■□□ 2.9
PRKCZ-219	ENST00000484419	PKD1L3	Q7Z443	1732 aa		33.14	■■■□□ 2.9
PRKCZ-219	ENST00000484419	MAPK8IP3	Q9UPT6	1336 aa		33.13	■■■□□ 2.89
PRKCZ-219	ENST00000484419	RUNDC1	Q96C34	613 aa		33.13	■■■□□ 2.89
PRKCZ-219	ENST00000484419	DCAF5	Q96JK2	942 aa		33.13	■■■□□ 2.89
PRKCZ-219	ENST00000484419	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.1	■■■□□ 2.89
PRKCZ-219	ENST00000484419	GNAT3	A8MTJ3	354 aa		33.08	■■■□□ 2.89
PRKCZ-219	ENST00000484419	TRIM37	O94972	964 aa		33.08	■■■□□ 2.89
PRKCZ-219	ENST00000484419	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
PRKCZ-219	ENST00000484419	SHANK3	Q9BYB0	1731 aa		33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	ERVV-2	B6SEH9	535 aa		33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	HTATSF1	O43719	755 aa	Known RBP	33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	PRIM1	P49642	420 aa	Known RBP	33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	NFE2L2	Q16236	605 aa		33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	CCDC146	Q8IYE0	955 aa		33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	ACSBG1	Q96GR2	724 aa		33.06	■■■□□ 2.88
PRKCZ-219	ENST00000484419	MPRIP	Q6WCQ1	1025 aa		33.05	■■■□□ 2.88
PRKCZ-219	ENST00000484419	KCNQ2	O43526	872 aa		33.04	■■■□□ 2.88
PRKCZ-219	ENST00000484419	SF3B2	Q13435	895 aa	Known RBP	33.04	■■■□□ 2.88
PRKCZ-219	ENST00000484419	FAM9B	Q8IZU0	186 aa		33.03	■■■□□ 2.88
PRKCZ-219	ENST00000484419	MAP3K5	Q99683	1374 aa		33.03	■■■□□ 2.88
PRKCZ-219	ENST00000484419	SOCS7	O14512	581 aa		33.01	■■■□□ 2.87
PRKCZ-219	ENST00000484419	RNMT	O43148	476 aa	Known RBP	33.01	■■■□□ 2.87
PRKCZ-219	ENST00000484419	RTF1	Q92541	710 aa	Known RBP	33.01	■■■□□ 2.87
PRKCZ-219	ENST00000484419	SYTL4	Q96C24	671 aa	Predicted RBP	33.01	■■■□□ 2.87
PRKCZ-219	ENST00000484419	TMPO	P42166	694 aa	Known RBP	33	■■■□□ 2.87
PRKCZ-219	ENST00000484419	LGR6	Q9HBX8	967 aa		33	■■■□□ 2.87
PRKCZ-219	ENST00000484419	IL17RE	Q8NFR9	667 aa		32.98	■■■□□ 2.87
PRKCZ-219	ENST00000484419	KDM6A	O15550	1401 aa	Predicted RBP	32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	APBA3	O96018	575 aa		32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	RIPK4	P57078	832 aa		32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	CABP4	P57796	275 aa		32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	PTF1A	Q7RTS3	328 aa		32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	TMOD3	Q9NYL9	352 aa		32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	EP400	Q96L91	3159 aa		32.97	■■■□□ 2.87
PRKCZ-219	ENST00000484419	APAF1	O14727	1248 aa		32.95	■■■□□ 2.87
PRKCZ-219	ENST00000484419	LMOD3	Q0VAK6	560 aa		32.94	■■■□□ 2.86
PRKCZ-219	ENST00000484419	PIGB	Q92521	554 aa		32.94	■■■□□ 2.86
PRKCZ-219	ENST00000484419	PLSCR1	O15162	318 aa		32.93	■■■□□ 2.86
PRKCZ-219	ENST00000484419	BAG6	P46379	1132 aa		32.93	■■■□□ 2.86
PRKCZ-219	ENST00000484419	NFATC2IP	Q8NCF5	419 aa		32.93	■■■□□ 2.86
PRKCZ-219	ENST00000484419	SLC52A2	Q9HAB3	445 aa		32.93	■■■□□ 2.86
PRKCZ-219	ENST00000484419	NCBP3	Q53F19	620 aa	Known RBP	32.91	■■■□□ 2.86
PRKCZ-219	ENST00000484419	CEMIP	Q8WUJ3	1361 aa		32.91	■■■□□ 2.86
PRKCZ-219	ENST00000484419	TEF	Q10587	303 aa		32.9	■■■□□ 2.86
PRKCZ-219	ENST00000484419	NEUROD2	Q15784	382 aa		32.9	■■■□□ 2.86
PRKCZ-219	ENST00000484419	RRP7A	Q9Y3A4	280 aa	Known RBP	32.9	■■■□□ 2.86
PRKCZ-219	ENST00000484419	MCM10	Q7L590	875 aa		32.89	■■■□□ 2.86
PRKCZ-219	ENST00000484419	SMARCC1	Q92922	1105 aa	Predicted RBP	32.88	■■■□□ 2.85
PRKCZ-219	ENST00000484419	NHS	Q6T4R5	1651 aa		32.88	■■■□□ 2.85
PRKCZ-219	ENST00000484419	SBF2	Q86WG5	1849 aa		32.87	■■■□□ 2.85
PRKCZ-219	ENST00000484419	DCTN1	Q14203	1278 aa		32.86	■■■□□ 2.85
PRKCZ-219	ENST00000484419	TRIM35	Q9UPQ4	493 aa		32.85	■■■□□ 2.85
PRKCZ-219	ENST00000484419	NGEF	Q8N5V2	710 aa		32.84	■■■□□ 2.85
PRKCZ-219	ENST00000484419	CAMKK2	Q96RR4	588 aa		32.84	■■■□□ 2.85
PRKCZ-219	ENST00000484419	DOT1L	Q8TEK3	1739 aa		32.83	■■■□□ 2.85
PRKCZ-219	ENST00000484419	EN1	Q05925	392 aa	Predicted RBP	32.83	■■■□□ 2.85
PRKCZ-219	ENST00000484419	DEFB132	Q7Z7B7	95 aa		32.83	■■■□□ 2.85
PRKCZ-219	ENST00000484419	ADAMTS7	Q9UKP4	1686 aa		32.82	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms