RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 ZCRB1Q8TBF4 217 aaKnown RBP39.31■■■■□ 3.88
HLA-C-207ENST00000484378 CGNL1Q0VF96 1302 aa39.29■■■■□ 3.88
HLA-C-207ENST00000484378 HSPA5P11021 654 aaKnown RBP39.28■■■■□ 3.88
HLA-C-207ENST00000484378 PPP1R1BQ9UD71 204 aaPredicted RBP39.28■■■■□ 3.88
HLA-C-207ENST00000484378 DOT1LQ8TEK3 1739 aa39.28■■■■□ 3.88
HLA-C-207ENST00000484378 RAPGEF4Q8WZA2 1011 aa39.27■■■■□ 3.88
HLA-C-207ENST00000484378 SLC15A2Q16348 729 aa39.26■■■■□ 3.88
HLA-C-207ENST00000484378 EMILIN1Q9Y6C2 1016 aa39.26■■■■□ 3.88
HLA-C-207ENST00000484378 SYTL4Q96C24 671 aaPredicted RBP39.24■■■■□ 3.87
HLA-C-207ENST00000484378 PDGFDQ9GZP0 370 aaPredicted RBP39.24■■■■□ 3.87
HLA-C-207ENST00000484378 PAPPAQ13219 1627 aa39.24■■■■□ 3.87
HLA-C-207ENST00000484378 ANKRD26Q9UPS8 1709 aa39.23■■■■□ 3.87
HLA-C-207ENST00000484378 PPM1GO15355 546 aaPredicted RBP39.21■■■■□ 3.87
HLA-C-207ENST00000484378 TATP17735 454 aaPredicted RBP39.21■■■■□ 3.87
HLA-C-207ENST00000484378 ZBTB7AO95365 584 aa39.19■■■■□ 3.86
HLA-C-207ENST00000484378 PRIM1P49642 420 aaKnown RBP39.19■■■■□ 3.86
HLA-C-207ENST00000484378 LRRC4BQ9NT99 713 aa39.15■■■■□ 3.86
HLA-C-207ENST00000484378 NSD2O96028 1365 aa39.14■■■■□ 3.86
HLA-C-207ENST00000484378 MAP2P11137 1827 aaKnown RBP39.14■■■■□ 3.86
HLA-C-207ENST00000484378 SLC27A3Q5K4L6 730 aa39.13■■■■□ 3.85
HLA-C-207ENST00000484378 PCDH11XQ9BZA7 1347 aa39.13■■■■□ 3.85
HLA-C-207ENST00000484378 PCDH11YQ9BZA8 1340 aa39.13■■■■□ 3.85
HLA-C-207ENST00000484378 WASHC2AQ641Q2 1341 aa39.11■■■■□ 3.85
HLA-C-207ENST00000484378 ZNF827Q17R98 1081 aa39.1■■■■□ 3.85
HLA-C-207ENST00000484378 ATF5Q9Y2D1 282 aaPredicted RBP39.1■■■■□ 3.85
HLA-C-207ENST00000484378 PANK3Q9H999 370 aa39.09■■■■□ 3.85
HLA-C-207ENST00000484378 TNNT2P45379 298 aaPredicted RBP39.08■■■■□ 3.85
HLA-C-207ENST00000484378 POLKQ9UBT6 870 aa39.08■■■■□ 3.85
HLA-C-207ENST00000484378 NCAPD2Q15021 1401 aa39.07■■■■□ 3.85
HLA-C-207ENST00000484378 LY75O60449 1722 aa39.07■■■■□ 3.85
HLA-C-207ENST00000484378 MTFR1LQ9H019 292 aa39.07■■■■□ 3.85
HLA-C-207ENST00000484378 PKD1L3Q7Z443 1732 aa39.06■■■■□ 3.84
HLA-C-207ENST00000484378 PTGER2P43116 358 aa39.05■■■■□ 3.84
HLA-C-207ENST00000484378 KCNQ4P56696 695 aa39.02■■■■□ 3.84
HLA-C-207ENST00000484378 AKT1S1Q96B36 256 aa39.02■■■■□ 3.84
HLA-C-207ENST00000484378 CYP27B1O15528 508 aa39■■■■□ 3.83
HLA-C-207ENST00000484378 EYA1Q99502 592 aa39■■■■□ 3.83
HLA-C-207ENST00000484378 CCNL1Q9UK58 526 aaPredicted RBP38.99■■■■□ 3.83
HLA-C-207ENST00000484378 QSER1Q2KHR3 1735 aa38.99■■■■□ 3.83
HLA-C-207ENST00000484378 SPG7Q9UQ90 795 aa38.96■■■■□ 3.83
HLA-C-207ENST00000484378 TOGARAM1Q9Y4F4 1720 aa38.96■■■■□ 3.83
HLA-C-207ENST00000484378 TUBGCP6Q96RT7 1819 aa38.94■■■■□ 3.82
HLA-C-207ENST00000484378 DCAF8L1A6NGE4 600 aa38.94■■■■□ 3.82
HLA-C-207ENST00000484378 EIF4A2Q14240 407 aaKnown RBP38.94■■■■□ 3.82
HLA-C-207ENST00000484378 TFCP2L1Q9NZI6 479 aa38.94■■■■□ 3.82
HLA-C-207ENST00000484378 SGIP1Q9BQI5 828 aa38.93■■■■□ 3.82
HLA-C-207ENST00000484378 MPRIPQ6WCQ1 1025 aa38.92■■■■□ 3.82
HLA-C-207ENST00000484378 PNPLA7Q6ZV29 1317 aa38.91■■■■□ 3.82
HLA-C-207ENST00000484378 ITGB4P16144 1822 aa38.89■■■■□ 3.82
HLA-C-207ENST00000484378 MORC1Q86VD1 984 aa38.89■■■■□ 3.82
HLA-C-207ENST00000484378 PALLDQ8WX93 1383 aa38.88■■■■□ 3.81
HLA-C-207ENST00000484378 FHDC1Q9C0D6 1143 aaPredicted RBP38.88■■■■□ 3.81
HLA-C-207ENST00000484378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.88■■■■□ 3.81
HLA-C-207ENST00000484378 KNSTRNQ9Y448 316 aa38.88■■■■□ 3.81
HLA-C-207ENST00000484378 SLC16A10Q8TF71 515 aa38.87■■■■□ 3.81
HLA-C-207ENST00000484378 ARXQ96QS3 562 aa38.86■■■■□ 3.81
HLA-C-207ENST00000484378 C5P01031 1676 aa38.85■■■■□ 3.81
HLA-C-207ENST00000484378 NKX1-1Q15270 411 aaPredicted RBP38.85■■■■□ 3.81
HLA-C-207ENST00000484378 KIF7Q2M1P5 1343 aa38.85■■■■□ 3.81
HLA-C-207ENST00000484378 IGSF1Q8N6C5 1336 aa38.84■■■■□ 3.81
HLA-C-207ENST00000484378 SYT17Q9BSW7 474 aa38.82■■■■□ 3.8
HLA-C-207ENST00000484378 PLEKHG2Q9H7P9 1386 aa38.82■■■■□ 3.8
HLA-C-207ENST00000484378 SMARCC1Q92922 1105 aaPredicted RBP38.81■■■■□ 3.8
HLA-C-207ENST00000484378 IFNL2Q8IZJ0 200 aa38.8■■■■□ 3.8
HLA-C-207ENST00000484378 PHKG2P15735 406 aa38.79■■■■□ 3.8
HLA-C-207ENST00000484378 PIGBQ92521 554 aa38.79■■■■□ 3.8
HLA-C-207ENST00000484378 HMGB2P26583 209 aaKnown RBP38.78■■■■□ 3.8
HLA-C-207ENST00000484378 POLD1P28340 1107 aa38.78■■■■□ 3.8
HLA-C-207ENST00000484378 TAF1LQ8IZX4 1826 aa38.77■■■■□ 3.8
HLA-C-207ENST00000484378 COL24A1Q17RW2 1714 aa38.77■■■■□ 3.8
HLA-C-207ENST00000484378 MSH5O43196 834 aa38.76■■■■□ 3.8
HLA-C-207ENST00000484378 TMOD3Q9NYL9 352 aa38.76■■■■□ 3.8
HLA-C-207ENST00000484378 YY1P25490 414 aa38.75■■■■□ 3.79
HLA-C-207ENST00000484378 MAP3K5Q99683 1374 aa38.74■■■■□ 3.79
HLA-C-207ENST00000484378 AMER1Q5JTC6 1135 aaPredicted RBP38.74■■■■□ 3.79
HLA-C-207ENST00000484378 COL23A1Q86Y22 540 aaPredicted RBP38.71■■■■□ 3.79
HLA-C-207ENST00000484378 C4BP0C0L5 1744 aa38.71■■■■□ 3.79
HLA-C-207ENST00000484378 KLHL34Q8N239 644 aa38.69■■■■□ 3.78
HLA-C-207ENST00000484378 PLEKHO1Q53GL0 409 aaPredicted RBP38.68■■■■□ 3.78
HLA-C-207ENST00000484378 AK7Q96M32 723 aa38.67■■■■□ 3.78
HLA-C-207ENST00000484378 LOC102724428A0A0B4J2F2 783 aa38.65■■■■□ 3.78
HLA-C-207ENST00000484378 SIK1P57059 783 aa38.65■■■■□ 3.78
HLA-C-207ENST00000484378 AEBP1Q8IUX7 1158 aa38.65■■■■□ 3.78
HLA-C-207ENST00000484378 FLAD1Q8NFF5 587 aa38.65■■■■□ 3.78
HLA-C-207ENST00000484378 ASAP1Q9ULH1 1129 aa38.65■■■■□ 3.78
HLA-C-207ENST00000484378 UTRNP46939 3433 aa38.64■■■■□ 3.78
HLA-C-207ENST00000484378 HSP90AB1P08238 724 aaKnown RBP38.64■■■■□ 3.78
HLA-C-207ENST00000484378 ZNF530Q6P9A1 599 aaPredicted RBP38.64■■■■□ 3.78
HLA-C-207ENST00000484378 AMOTQ4VCS5 1084 aa38.63■■■■□ 3.77
HLA-C-207ENST00000484378 MSL1Q68DK7 614 aa38.61■■■■□ 3.77
HLA-C-207ENST00000484378 SULT6B1Q6IMI4 303 aa38.61■■■■□ 3.77
HLA-C-207ENST00000484378 DCAF5Q96JK2 942 aa38.61■■■■□ 3.77
HLA-C-207ENST00000484378 IL13P35225 146 aa38.6■■■■□ 3.77
HLA-C-207ENST00000484378 KDRP35968 1356 aa38.58■■■■□ 3.77
HLA-C-207ENST00000484378 UBR3Q6ZT12 1888 aa38.58■■■■□ 3.77
HLA-C-207ENST00000484378 ERVV-2B6SEH9 535 aa38.58■■■■□ 3.77
HLA-C-207ENST00000484378 PER1O15534 1290 aaPredicted RBP38.58■■■■□ 3.77
HLA-C-207ENST00000484378 ATG3Q9NT62 314 aa38.58■■■■□ 3.77
HLA-C-207ENST00000484378 KDM6AO15550 1401 aaPredicted RBP38.57■■■■□ 3.77
HLA-C-207ENST00000484378 CC2D1BQ5T0F9 858 aaKnown RBP38.57■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms