RNA–Protein interactions for RNA: ENST00000484358.1

RPL3-216, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-216ENST00000484358 E9PSI1 815 aa17.65■□□□□ 0.42
RPL3-216ENST00000484358 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
RPL3-216ENST00000484358 WWC1Q8IX03 1113 aa17.65■□□□□ 0.42
RPL3-216ENST00000484358 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.42
RPL3-216ENST00000484358 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
RPL3-216ENST00000484358 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.41
RPL3-216ENST00000484358 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
RPL3-216ENST00000484358 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
RPL3-216ENST00000484358 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
RPL3-216ENST00000484358 IL16Q14005 1332 aa17.64■□□□□ 0.41
RPL3-216ENST00000484358 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
RPL3-216ENST00000484358 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
RPL3-216ENST00000484358 PARP4Q9UKK3 1724 aaKnown RBP17.63■□□□□ 0.41
RPL3-216ENST00000484358 CRB1P82279 1406 aa17.63■□□□□ 0.41
RPL3-216ENST00000484358 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
RPL3-216ENST00000484358 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
RPL3-216ENST00000484358 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
RPL3-216ENST00000484358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
RPL3-216ENST00000484358 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
RPL3-216ENST00000484358 STRN4Q9NRL3 753 aa17.61■□□□□ 0.41
RPL3-216ENST00000484358 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
RPL3-216ENST00000484358 NRAPQ86VF7 1730 aa17.59■□□□□ 0.41
RPL3-216ENST00000484358 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
RPL3-216ENST00000484358 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
RPL3-216ENST00000484358 ATRNO75882 1429 aa17.58■□□□□ 0.41
RPL3-216ENST00000484358 MAP3K5Q99683 1374 aa17.58■□□□□ 0.4
RPL3-216ENST00000484358 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
RPL3-216ENST00000484358 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
RPL3-216ENST00000484358 SLFN5Q08AF3 891 aa17.58■□□□□ 0.4
RPL3-216ENST00000484358 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
RPL3-216ENST00000484358 SLIT2O94813 1529 aa17.57■□□□□ 0.4
RPL3-216ENST00000484358 AKAP4Q5JQC9 854 aa17.57■□□□□ 0.4
RPL3-216ENST00000484358 LARP1Q6PKG0 1096 aaKnown RBP17.57■□□□□ 0.4
RPL3-216ENST00000484358 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
RPL3-216ENST00000484358 PKD1L3Q7Z443 1732 aa17.57■□□□□ 0.4
RPL3-216ENST00000484358 IL2RBP14784 551 aa17.56■□□□□ 0.4
RPL3-216ENST00000484358 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
RPL3-216ENST00000484358 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
RPL3-216ENST00000484358 OVOS2A0A0G2JMS6 1433 aa17.55■□□□□ 0.4
RPL3-216ENST00000484358 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.55■□□□□ 0.4
RPL3-216ENST00000484358 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
RPL3-216ENST00000484358 GNAI1P63096 354 aa17.55■□□□□ 0.4
RPL3-216ENST00000484358 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
RPL3-216ENST00000484358 UNC5CLQ8IV45 518 aa17.54■□□□□ 0.4
RPL3-216ENST00000484358 TRMT2AQ8IZ69 625 aaKnown RBP17.54■□□□□ 0.4
RPL3-216ENST00000484358 MEGF6O75095 1541 aa17.53■□□□□ 0.4
RPL3-216ENST00000484358 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
RPL3-216ENST00000484358 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
RPL3-216ENST00000484358 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
RPL3-216ENST00000484358 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
RPL3-216ENST00000484358 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.4
RPL3-216ENST00000484358 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.4
RPL3-216ENST00000484358 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
RPL3-216ENST00000484358 CCDC125Q86Z20 511 aa17.52■□□□□ 0.4
RPL3-216ENST00000484358 IFNL2Q8IZJ0 200 aa17.52■□□□□ 0.4
RPL3-216ENST00000484358 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
RPL3-216ENST00000484358 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.4
RPL3-216ENST00000484358 BCL9LQ86UU0 1499 aa17.51■□□□□ 0.39
RPL3-216ENST00000484358 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
RPL3-216ENST00000484358 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
RPL3-216ENST00000484358 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
RPL3-216ENST00000484358 SPATA31A1Q5TZJ5 1347 aa17.49■□□□□ 0.39
RPL3-216ENST00000484358 VPS72Q15906 364 aa17.49■□□□□ 0.39
RPL3-216ENST00000484358 CCDC9Q9Y3X0 531 aaKnown RBP17.49■□□□□ 0.39
RPL3-216ENST00000484358 SPATA31A5Q5VU36 1347 aa17.48■□□□□ 0.39
RPL3-216ENST00000484358 SPATA31A7Q8IWB4 1347 aa17.48■□□□□ 0.39
RPL3-216ENST00000484358 MCM10Q7L590 875 aa17.48■□□□□ 0.39
RPL3-216ENST00000484358 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
RPL3-216ENST00000484358 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
RPL3-216ENST00000484358 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
RPL3-216ENST00000484358 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 TEFQ10587 303 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 BARGINQ6ZT62 677 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
RPL3-216ENST00000484358 ADAMTS7Q9UKP4 1686 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
RPL3-216ENST00000484358 NEFLP07196 543 aa17.46■□□□□ 0.39
RPL3-216ENST00000484358 PHKG2P15735 406 aa17.46■□□□□ 0.39
RPL3-216ENST00000484358 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
RPL3-216ENST00000484358 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
RPL3-216ENST00000484358 RCAN3Q9UKA8 241 aa17.46■□□□□ 0.39
RPL3-216ENST00000484358 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
RPL3-216ENST00000484358 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
RPL3-216ENST00000484358 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
RPL3-216ENST00000484358 THUMPD2Q9BTF0 503 aaKnown RBP17.45■□□□□ 0.38
RPL3-216ENST00000484358 CHMP4AQ9BY43 222 aa17.45■□□□□ 0.38
RPL3-216ENST00000484358 EXOC5O00471 708 aa17.44■□□□□ 0.38
RPL3-216ENST00000484358 CHL1O00533 1208 aa17.44■□□□□ 0.38
RPL3-216ENST00000484358 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
RPL3-216ENST00000484358 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
RPL3-216ENST00000484358 SOS1Q07889 1333 aaPredicted RBP17.44■□□□□ 0.38
RPL3-216ENST00000484358 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
RPL3-216ENST00000484358 TSPYL4Q9UJ04 414 aa17.43■□□□□ 0.38
RPL3-216ENST00000484358 SHANK3Q9BYB0 1731 aa17.43■□□□□ 0.38
RPL3-216ENST00000484358 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
RPL3-216ENST00000484358 NKX1-1Q15270 411 aaPredicted RBP17.42■□□□□ 0.38
RPL3-216ENST00000484358 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
RPL3-216ENST00000484358 MBIPQ9NS73 344 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms