RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
NUP50-215ENST00000484186 MYOM1P52179 1685 aa13.05□□□□□ -0.32
NUP50-215ENST00000484186 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
NUP50-215ENST00000484186 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
NUP50-215ENST00000484186 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
NUP50-215ENST00000484186 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
NUP50-215ENST00000484186 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
NUP50-215ENST00000484186 MEGF6O75095 1541 aa13.03□□□□□ -0.32
NUP50-215ENST00000484186 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
NUP50-215ENST00000484186 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
NUP50-215ENST00000484186 BTAF1O14981 1849 aa13.03□□□□□ -0.32
NUP50-215ENST00000484186 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
NUP50-215ENST00000484186 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
NUP50-215ENST00000484186 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
NUP50-215ENST00000484186 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
NUP50-215ENST00000484186 PTGER2P43116 358 aa13.01□□□□□ -0.33
NUP50-215ENST00000484186 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
NUP50-215ENST00000484186 MTFR1LQ9H019 292 aa13□□□□□ -0.33
NUP50-215ENST00000484186 PANK3Q9H999 370 aa13□□□□□ -0.33
NUP50-215ENST00000484186 POLKQ9UBT6 870 aa13□□□□□ -0.33
NUP50-215ENST00000484186 NSD2O96028 1365 aa12.99□□□□□ -0.33
NUP50-215ENST00000484186 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
NUP50-215ENST00000484186 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
NUP50-215ENST00000484186 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
NUP50-215ENST00000484186 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
NUP50-215ENST00000484186 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
NUP50-215ENST00000484186 KCNQ4P56696 695 aa12.98□□□□□ -0.33
NUP50-215ENST00000484186 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
NUP50-215ENST00000484186 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
NUP50-215ENST00000484186 CYP27B1O15528 508 aa12.97□□□□□ -0.33
NUP50-215ENST00000484186 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
NUP50-215ENST00000484186 EYA1Q99502 592 aa12.97□□□□□ -0.33
NUP50-215ENST00000484186 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
NUP50-215ENST00000484186 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
NUP50-215ENST00000484186 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
NUP50-215ENST00000484186 SPG7Q9UQ90 795 aa12.96□□□□□ -0.33
NUP50-215ENST00000484186 MAP2P11137 1827 aaKnown RBP12.96□□□□□ -0.33
NUP50-215ENST00000484186 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
NUP50-215ENST00000484186 SLC16A10Q8TF71 515 aa12.95□□□□□ -0.34
NUP50-215ENST00000484186 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
NUP50-215ENST00000484186 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
NUP50-215ENST00000484186 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
NUP50-215ENST00000484186 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
NUP50-215ENST00000484186 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
NUP50-215ENST00000484186 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
NUP50-215ENST00000484186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.345e-6■□□□□ 10.1
NUP50-215ENST00000484186 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
NUP50-215ENST00000484186 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
NUP50-215ENST00000484186 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
NUP50-215ENST00000484186 ARXQ96QS3 562 aa12.93□□□□□ -0.34
NUP50-215ENST00000484186 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
NUP50-215ENST00000484186 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
NUP50-215ENST00000484186 LY75O60449 1722 aa12.93□□□□□ -0.34
NUP50-215ENST00000484186 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
NUP50-215ENST00000484186 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
NUP50-215ENST00000484186 PIGBQ92521 554 aa12.91□□□□□ -0.34
NUP50-215ENST00000484186 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
NUP50-215ENST00000484186 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
NUP50-215ENST00000484186 PHKG2P15735 406 aa12.9□□□□□ -0.34
NUP50-215ENST00000484186 YY1P25490 414 aa12.9□□□□□ -0.34
NUP50-215ENST00000484186 POLD1P28340 1107 aa12.9□□□□□ -0.34
NUP50-215ENST00000484186 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
NUP50-215ENST00000484186 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
NUP50-215ENST00000484186 MSH5O43196 834 aa12.89□□□□□ -0.35
NUP50-215ENST00000484186 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
NUP50-215ENST00000484186 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
NUP50-215ENST00000484186 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
NUP50-215ENST00000484186 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
NUP50-215ENST00000484186 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
NUP50-215ENST00000484186 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
NUP50-215ENST00000484186 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
NUP50-215ENST00000484186 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
NUP50-215ENST00000484186 ITGB4P16144 1822 aa12.87□□□□□ -0.35
NUP50-215ENST00000484186 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
NUP50-215ENST00000484186 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
NUP50-215ENST00000484186 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
NUP50-215ENST00000484186 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
NUP50-215ENST00000484186 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
NUP50-215ENST00000484186 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
NUP50-215ENST00000484186 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
NUP50-215ENST00000484186 SIK1P57059 783 aa12.85□□□□□ -0.35
NUP50-215ENST00000484186 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
NUP50-215ENST00000484186 AK7Q96M32 723 aa12.85□□□□□ -0.35
NUP50-215ENST00000484186 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
NUP50-215ENST00000484186 C5P01031 1676 aa12.84□□□□□ -0.35
NUP50-215ENST00000484186 IL13P35225 146 aa12.84□□□□□ -0.35
NUP50-215ENST00000484186 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
NUP50-215ENST00000484186 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
NUP50-215ENST00000484186 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
NUP50-215ENST00000484186 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
NUP50-215ENST00000484186 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
NUP50-215ENST00000484186 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
NUP50-215ENST00000484186 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
NUP50-215ENST00000484186 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
NUP50-215ENST00000484186 MTHFSP49914 203 aa12.82□□□□□ -0.36
NUP50-215ENST00000484186 GPR162Q16538 588 aa12.82□□□□□ -0.36
NUP50-215ENST00000484186 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
NUP50-215ENST00000484186 TAF1LQ8IZX4 1826 aa12.82□□□□□ -0.36
NUP50-215ENST00000484186 PHF14O94880 888 aa12.81□□□□□ -0.36
NUP50-215ENST00000484186 SSFA2P28290 1259 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms