RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 DOT1LQ8TEK3 1739 aa18.19■□□□□ 0.5
DNMT3A-213ENST00000484184 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
DNMT3A-213ENST00000484184 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
DNMT3A-213ENST00000484184 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
DNMT3A-213ENST00000484184 COL23A1Q86Y22 540 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-213ENST00000484184 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-213ENST00000484184 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-213ENST00000484184 RGPD2P0DJD1 1756 aa18.16■□□□□ 0.5
DNMT3A-213ENST00000484184 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
DNMT3A-213ENST00000484184 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
DNMT3A-213ENST00000484184 MEGF6O75095 1541 aa18.14■□□□□ 0.49
DNMT3A-213ENST00000484184 GRIN3BO60391 1043 aa18.14■□□□□ 0.49
DNMT3A-213ENST00000484184 FBLN1P23142 703 aa18.14■□□□□ 0.49
DNMT3A-213ENST00000484184 ZCRB1Q8TBF4 217 aaKnown RBP18.14■□□□□ 0.49
DNMT3A-213ENST00000484184 HOXC9P31274 260 aa18.13■□□□□ 0.49
DNMT3A-213ENST00000484184 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
DNMT3A-213ENST00000484184 CCNL1Q9UK58 526 aaPredicted RBP18.13■□□□□ 0.49
DNMT3A-213ENST00000484184 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
DNMT3A-213ENST00000484184 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
DNMT3A-213ENST00000484184 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
DNMT3A-213ENST00000484184 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
DNMT3A-213ENST00000484184 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
DNMT3A-213ENST00000484184 ADCY9O60503 1353 aa18.08■□□□□ 0.49
DNMT3A-213ENST00000484184 USP47Q96K76 1375 aa18.08■□□□□ 0.49
DNMT3A-213ENST00000484184 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
DNMT3A-213ENST00000484184 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
DNMT3A-213ENST00000484184 C5P01031 1676 aa18.07■□□□□ 0.48
DNMT3A-213ENST00000484184 MSH5O43196 834 aa18.07■□□□□ 0.48
DNMT3A-213ENST00000484184 CD2APQ9Y5K6 639 aa18.07■□□□□ 0.48
DNMT3A-213ENST00000484184 TAF1LQ8IZX4 1826 aa18.07■□□□□ 0.48
DNMT3A-213ENST00000484184 AMPHP49418 695 aa18.06■□□□□ 0.48
DNMT3A-213ENST00000484184 COG3Q96JB2 828 aa18.06■□□□□ 0.48
DNMT3A-213ENST00000484184 TESK2Q96S53 571 aa18.06■□□□□ 0.48
DNMT3A-213ENST00000484184 AMIGO3Q86WK7 504 aa18.05■□□□□ 0.48
DNMT3A-213ENST00000484184 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
DNMT3A-213ENST00000484184 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
DNMT3A-213ENST00000484184 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
DNMT3A-213ENST00000484184 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
DNMT3A-213ENST00000484184 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.48
DNMT3A-213ENST00000484184 FLAD1Q8NFF5 587 aa18.02■□□□□ 0.48
DNMT3A-213ENST00000484184 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
DNMT3A-213ENST00000484184 PALLDQ8WX93 1383 aa18.02■□□□□ 0.47
DNMT3A-213ENST00000484184 HSPA6P17066 643 aa18.01■□□□□ 0.47
DNMT3A-213ENST00000484184 C4BP0C0L5 1744 aa18■□□□□ 0.47
DNMT3A-213ENST00000484184 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
DNMT3A-213ENST00000484184 FYB1O15117 783 aa17.99■□□□□ 0.47
DNMT3A-213ENST00000484184 CYP27B1O15528 508 aa17.99■□□□□ 0.47
DNMT3A-213ENST00000484184 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
DNMT3A-213ENST00000484184 RAPGEF4Q8WZA2 1011 aa17.99■□□□□ 0.47
DNMT3A-213ENST00000484184 ITGB4P16144 1822 aa17.98■□□□□ 0.47
DNMT3A-213ENST00000484184 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
DNMT3A-213ENST00000484184 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
DNMT3A-213ENST00000484184 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
DNMT3A-213ENST00000484184 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
DNMT3A-213ENST00000484184 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
DNMT3A-213ENST00000484184 TATP17735 454 aaPredicted RBP17.97■□□□□ 0.47
DNMT3A-213ENST00000484184 HSP90AB2PQ58FF8 381 aa17.97■□□□□ 0.47
DNMT3A-213ENST00000484184 GGNBP2Q9H3C7 697 aa17.97■□□□□ 0.47
DNMT3A-213ENST00000484184 MAP2P11137 1827 aaKnown RBP17.97■□□□□ 0.47
DNMT3A-213ENST00000484184 IGSF1Q8N6C5 1336 aa17.97■□□□□ 0.47
DNMT3A-213ENST00000484184 INSRP06213 1382 aa17.96■□□□□ 0.47
DNMT3A-213ENST00000484184 KIF3CO14782 793 aa17.95■□□□□ 0.46
DNMT3A-213ENST00000484184 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
DNMT3A-213ENST00000484184 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-213ENST00000484184 HMGB2P26583 209 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-213ENST00000484184 PIGBQ92521 554 aa17.94■□□□□ 0.46
DNMT3A-213ENST00000484184 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-213ENST00000484184 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
DNMT3A-213ENST00000484184 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
DNMT3A-213ENST00000484184 SMARCC1Q92922 1105 aaPredicted RBP17.93■□□□□ 0.46
DNMT3A-213ENST00000484184 AK7Q96M32 723 aa17.93■□□□□ 0.46
DNMT3A-213ENST00000484184 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-213ENST00000484184 PHF14O94880 888 aa17.92■□□□□ 0.46
DNMT3A-213ENST00000484184 NKX1-1Q15270 411 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-213ENST00000484184 FLT4P35916 1363 aa17.91■□□□□ 0.46
DNMT3A-213ENST00000484184 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
DNMT3A-213ENST00000484184 SSFA2P28290 1259 aa17.91■□□□□ 0.46
DNMT3A-213ENST00000484184 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
DNMT3A-213ENST00000484184 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.46
DNMT3A-213ENST00000484184 KIAA1551Q9HCM1 1747 aa17.89■□□□□ 0.46
DNMT3A-213ENST00000484184 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.45
DNMT3A-213ENST00000484184 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
DNMT3A-213ENST00000484184 SIK1P57059 783 aa17.89■□□□□ 0.45
DNMT3A-213ENST00000484184 ITPK1Q13572 414 aa17.89■□□□□ 0.45
DNMT3A-213ENST00000484184 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
DNMT3A-213ENST00000484184 KIF20BQ96Q89 1820 aa17.88■□□□□ 0.45
DNMT3A-213ENST00000484184 KIF13BQ9NQT8 1826 aa17.88■□□□□ 0.45
DNMT3A-213ENST00000484184 DNAJC5GQ8N7S2 189 aa17.87■□□□□ 0.45
DNMT3A-213ENST00000484184 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
DNMT3A-213ENST00000484184 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
DNMT3A-213ENST00000484184 PCGF6Q9BYE7 350 aa17.86■□□□□ 0.45
DNMT3A-213ENST00000484184 ASAP1Q9ULH1 1129 aa17.86■□□□□ 0.45
DNMT3A-213ENST00000484184 GNPATO15228 680 aa17.85■□□□□ 0.45
DNMT3A-213ENST00000484184 CARD14Q9BXL6 1004 aa17.85■□□□□ 0.45
DNMT3A-213ENST00000484184 MMP10P09238 476 aa17.84■□□□□ 0.45
DNMT3A-213ENST00000484184 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
DNMT3A-213ENST00000484184 ANKRD26Q9UPS8 1709 aa17.84■□□□□ 0.45
DNMT3A-213ENST00000484184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.44
DNMT3A-213ENST00000484184 ATP6V1AP38606 617 aa17.82■□□□□ 0.44
DNMT3A-213ENST00000484184 APLP1P51693 650 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms