RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
PCGF3-211ENST00000484141 SGIP1Q9BQI5 828 aa23.18■■□□□ 1.3
PCGF3-211ENST00000484141 KAT6BQ8WYB5 2073 aa23.17■■□□□ 1.3
PCGF3-211ENST00000484141 HSP90AB2PQ58FF8 381 aa23.17■■□□□ 1.3
PCGF3-211ENST00000484141 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
PCGF3-211ENST00000484141 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
PCGF3-211ENST00000484141 C1QTNF8P60827 252 aa23.16■■□□□ 1.3
PCGF3-211ENST00000484141 EMILIN1Q9Y6C2 1016 aa23.16■■□□□ 1.3
PCGF3-211ENST00000484141 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
PCGF3-211ENST00000484141 ARXQ96QS3 562 aa23.15■■□□□ 1.3
PCGF3-211ENST00000484141 SHANK3Q9BYB0 1731 aa23.15■■□□□ 1.3
PCGF3-211ENST00000484141 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
PCGF3-211ENST00000484141 MEGF6O75095 1541 aa23.14■■□□□ 1.3
PCGF3-211ENST00000484141 RTL1A6NKG5 1358 aa23.14■■□□□ 1.29
PCGF3-211ENST00000484141 BTAF1O14981 1849 aa23.11■■□□□ 1.29
PCGF3-211ENST00000484141 MAP2P11137 1827 aaKnown RBP23.11■■□□□ 1.29
PCGF3-211ENST00000484141 PANK3Q9H999 370 aa23.1■■□□□ 1.29
PCGF3-211ENST00000484141 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
PCGF3-211ENST00000484141 INSRP06213 1382 aa23.09■■□□□ 1.29
PCGF3-211ENST00000484141 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
PCGF3-211ENST00000484141 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
PCGF3-211ENST00000484141 GPR162Q16538 588 aa23.08■■□□□ 1.29
PCGF3-211ENST00000484141 FLT4P35916 1363 aa23.08■■□□□ 1.29
PCGF3-211ENST00000484141 CGNL1Q0VF96 1302 aa23.07■■□□□ 1.28
PCGF3-211ENST00000484141 CHD4Q14839 1912 aa23.06■■□□□ 1.28
PCGF3-211ENST00000484141 DOT1LQ8TEK3 1739 aa23.06■■□□□ 1.28
PCGF3-211ENST00000484141 ANKRD26Q9UPS8 1709 aa23.06■■□□□ 1.28
PCGF3-211ENST00000484141 ZNF827Q17R98 1081 aa23.06■■□□□ 1.28
PCGF3-211ENST00000484141 ZCRB1Q8TBF4 217 aaKnown RBP23.06■■□□□ 1.28
PCGF3-211ENST00000484141 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
PCGF3-211ENST00000484141 KLHL34Q8N239 644 aa23.04■■□□□ 1.28
PCGF3-211ENST00000484141 POLKQ9UBT6 870 aa23.04■■□□□ 1.28
PCGF3-211ENST00000484141 SMG6Q86US8 1419 aaKnown RBP23.04■■□□□ 1.28
PCGF3-211ENST00000484141 GIGYF1O75420 1035 aaPredicted RBP23.02■■□□□ 1.28
PCGF3-211ENST00000484141 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
PCGF3-211ENST00000484141 LRRC4BQ9NT99 713 aa23.02■■□□□ 1.28
PCGF3-211ENST00000484141 KCNQ4P56696 695 aa23.01■■□□□ 1.27
PCGF3-211ENST00000484141 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
PCGF3-211ENST00000484141 SYTL4Q96C24 671 aaPredicted RBP23.01■■□□□ 1.27
PCGF3-211ENST00000484141 NSD2O96028 1365 aa23.01■■□□□ 1.27
PCGF3-211ENST00000484141 KIF24Q5T7B8 1368 aa23.01■■□□□ 1.27
PCGF3-211ENST00000484141 POLD1P28340 1107 aa23■■□□□ 1.27
PCGF3-211ENST00000484141 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
PCGF3-211ENST00000484141 TATP17735 454 aaPredicted RBP22.99■■□□□ 1.27
PCGF3-211ENST00000484141 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
PCGF3-211ENST00000484141 WASHC2AQ641Q2 1341 aa22.99■■□□□ 1.27
PCGF3-211ENST00000484141 SLC16A10Q8TF71 515 aa22.98■■□□□ 1.27
PCGF3-211ENST00000484141 EYA1Q99502 592 aa22.98■■□□□ 1.27
PCGF3-211ENST00000484141 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
PCGF3-211ENST00000484141 CYP27B1O15528 508 aa22.95■■□□□ 1.26
PCGF3-211ENST00000484141 EIF4A2Q14240 407 aaKnown RBP22.95■■□□□ 1.26
PCGF3-211ENST00000484141 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
PCGF3-211ENST00000484141 SLC27A3Q5K4L6 730 aa22.95■■□□□ 1.26
PCGF3-211ENST00000484141 IFFO2Q5TF58 517 aa22.94■■□□□ 1.26
PCGF3-211ENST00000484141 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
PCGF3-211ENST00000484141 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
PCGF3-211ENST00000484141 PNPLA7Q6ZV29 1317 aa22.93■■□□□ 1.26
PCGF3-211ENST00000484141 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
PCGF3-211ENST00000484141 LY75O60449 1722 aa22.92■■□□□ 1.26
PCGF3-211ENST00000484141 NLGN2Q8NFZ4 835 aa22.92■■□□□ 1.26
PCGF3-211ENST00000484141 GOLGB1Q14789 3259 aaKnown RBP22.9■■□□□ 1.26
PCGF3-211ENST00000484141 PCDH11XQ9BZA7 1347 aa22.9■■□□□ 1.26
PCGF3-211ENST00000484141 PCDH11YQ9BZA8 1340 aa22.9■■□□□ 1.26
PCGF3-211ENST00000484141 MORC1Q86VD1 984 aa22.9■■□□□ 1.26
PCGF3-211ENST00000484141 ITGB4P16144 1822 aa22.89■■□□□ 1.26
PCGF3-211ENST00000484141 TUBGCP6Q96RT7 1819 aa22.89■■□□□ 1.25
PCGF3-211ENST00000484141 AMER1Q5JTC6 1135 aaPredicted RBP22.88■■□□□ 1.25
PCGF3-211ENST00000484141 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
PCGF3-211ENST00000484141 QSER1Q2KHR3 1735 aa22.87■■□□□ 1.25
PCGF3-211ENST00000484141 GRIN3BO60391 1043 aa22.86■■□□□ 1.25
PCGF3-211ENST00000484141 MPRIPQ6WCQ1 1025 aa22.86■■□□□ 1.25
PCGF3-211ENST00000484141 YBX3P16989 372 aaKnown RBP eCLIP22.85■■□□□ 1.25
PCGF3-211ENST00000484141 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
PCGF3-211ENST00000484141 COL24A1Q17RW2 1714 aa22.84■■□□□ 1.25
PCGF3-211ENST00000484141 IGSF1Q8N6C5 1336 aa22.83■■□□□ 1.25
PCGF3-211ENST00000484141 MSH5O43196 834 aa22.83■■□□□ 1.25
PCGF3-211ENST00000484141 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.25
PCGF3-211ENST00000484141 AEBP1Q8IUX7 1158 aa22.83■■□□□ 1.25
PCGF3-211ENST00000484141 CCNL1Q9UK58 526 aaPredicted RBP22.83■■□□□ 1.25
PCGF3-211ENST00000484141 SPG7Q9UQ90 795 aa22.82■■□□□ 1.24
PCGF3-211ENST00000484141 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
PCGF3-211ENST00000484141 PHKG2P15735 406 aa22.8■■□□□ 1.24
PCGF3-211ENST00000484141 NKX1-1Q15270 411 aaPredicted RBP22.8■■□□□ 1.24
PCGF3-211ENST00000484141 PIGBQ92521 554 aa22.8■■□□□ 1.24
PCGF3-211ENST00000484141 CEP350Q5VT06 3117 aa22.8■■□□□ 1.24
PCGF3-211ENST00000484141 PALLDQ8WX93 1383 aa22.78■■□□□ 1.24
PCGF3-211ENST00000484141 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
PCGF3-211ENST00000484141 COL23A1Q86Y22 540 aaPredicted RBP22.78■■□□□ 1.24
PCGF3-211ENST00000484141 ATP10DQ9P241 1426 aa22.78■■□□□ 1.24
PCGF3-211ENST00000484141 IL13P35225 146 aa22.77■■□□□ 1.24
PCGF3-211ENST00000484141 MSL1Q68DK7 614 aa22.77■■□□□ 1.24
PCGF3-211ENST00000484141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.77■■□□□ 1.24
PCGF3-211ENST00000484141 C5P01031 1676 aa22.77■■□□□ 1.24
PCGF3-211ENST00000484141 SMIM5Q71RC9 77 aa22.76■■□□□ 1.23
PCGF3-211ENST00000484141 IFNL2Q8IZJ0 200 aa22.76■■□□□ 1.23
PCGF3-211ENST00000484141 MTHFSP49914 203 aa22.75■■□□□ 1.23
PCGF3-211ENST00000484141 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
PCGF3-211ENST00000484141 AMIGO3Q86WK7 504 aa22.74■■□□□ 1.23
PCGF3-211ENST00000484141 GPBP1L1Q9HC44 474 aaPredicted RBP22.74■■□□□ 1.23
PCGF3-211ENST00000484141 ASAP1Q9ULH1 1129 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms