RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 HSPA5P11021 654 aaKnown RBP26.61■■□□□ 1.85
NDUFA3-213ENST00000484103 ZCRB1Q8TBF4 217 aaKnown RBP26.61■■□□□ 1.85
NDUFA3-213ENST00000484103 ATF5Q9Y2D1 282 aaPredicted RBP26.6■■□□□ 1.85
NDUFA3-213ENST00000484103 SLC15A2Q16348 729 aa26.59■■□□□ 1.85
NDUFA3-213ENST00000484103 RAPGEF4Q8WZA2 1011 aa26.59■■□□□ 1.85
NDUFA3-213ENST00000484103 DOT1LQ8TEK3 1739 aa26.59■■□□□ 1.85
NDUFA3-213ENST00000484103 FLT4P35916 1363 aa26.58■■□□□ 1.85
NDUFA3-213ENST00000484103 CASZ1Q86V15 1759 aa26.58■■□□□ 1.85
NDUFA3-213ENST00000484103 TNNT2P45379 298 aaPredicted RBP26.58■■□□□ 1.85
NDUFA3-213ENST00000484103 PRIM1P49642 420 aaKnown RBP26.58■■□□□ 1.85
NDUFA3-213ENST00000484103 KCNQ4P56696 695 aa26.58■■□□□ 1.85
NDUFA3-213ENST00000484103 EIF4G2P78344 907 aaKnown RBP eCLIP26.58■■□□□ 1.85
NDUFA3-213ENST00000484103 SHANK3Q9BYB0 1731 aa26.57■■□□□ 1.84
NDUFA3-213ENST00000484103 INSRP06213 1382 aa26.56■■□□□ 1.84
NDUFA3-213ENST00000484103 TATP17735 454 aaPredicted RBP26.55■■□□□ 1.84
NDUFA3-213ENST00000484103 LRRC4BQ9NT99 713 aa26.55■■□□□ 1.84
NDUFA3-213ENST00000484103 CGNL1Q0VF96 1302 aa26.54■■□□□ 1.84
NDUFA3-213ENST00000484103 ZNF827Q17R98 1081 aa26.53■■□□□ 1.84
NDUFA3-213ENST00000484103 PAPPAQ13219 1627 aa26.49■■□□□ 1.83
NDUFA3-213ENST00000484103 NSD2O96028 1365 aa26.48■■□□□ 1.83
NDUFA3-213ENST00000484103 PANK3Q9H999 370 aa26.48■■□□□ 1.83
NDUFA3-213ENST00000484103 KIF24Q5T7B8 1368 aa26.46■■□□□ 1.83
NDUFA3-213ENST00000484103 PTGER2P43116 358 aa26.46■■□□□ 1.83
NDUFA3-213ENST00000484103 PCDH11XQ9BZA7 1347 aa26.45■■□□□ 1.83
NDUFA3-213ENST00000484103 PCDH11YQ9BZA8 1340 aa26.45■■□□□ 1.83
NDUFA3-213ENST00000484103 MAP2P11137 1827 aaKnown RBP26.45■■□□□ 1.82
NDUFA3-213ENST00000484103 MTFR1LQ9H019 292 aa26.44■■□□□ 1.82
NDUFA3-213ENST00000484103 POLKQ9UBT6 870 aa26.44■■□□□ 1.82
NDUFA3-213ENST00000484103 SLC27A3Q5K4L6 730 aa26.43■■□□□ 1.82
NDUFA3-213ENST00000484103 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
NDUFA3-213ENST00000484103 MPRIPQ6WCQ1 1025 aa26.42■■□□□ 1.82
NDUFA3-213ENST00000484103 ANKRD26Q9UPS8 1709 aa26.42■■□□□ 1.82
NDUFA3-213ENST00000484103 CYP27B1O15528 508 aa26.41■■□□□ 1.82
NDUFA3-213ENST00000484103 AKT1S1Q96B36 256 aa26.41■■□□□ 1.82
NDUFA3-213ENST00000484103 EYA1Q99502 592 aa26.41■■□□□ 1.82
NDUFA3-213ENST00000484103 TFCP2L1Q9NZI6 479 aa26.41■■□□□ 1.82
NDUFA3-213ENST00000484103 WASHC2AQ641Q2 1341 aa26.4■■□□□ 1.82
NDUFA3-213ENST00000484103 DCAF8L1A6NGE4 600 aa26.39■■□□□ 1.82
NDUFA3-213ENST00000484103 KLHL34Q8N239 644 aa26.39■■□□□ 1.82
NDUFA3-213ENST00000484103 FHDC1Q9C0D6 1143 aaPredicted RBP26.39■■□□□ 1.82
NDUFA3-213ENST00000484103 MSH5O43196 834 aa26.38■■□□□ 1.81
NDUFA3-213ENST00000484103 EIF4A2Q14240 407 aaKnown RBP26.38■■□□□ 1.81
NDUFA3-213ENST00000484103 LY75O60449 1722 aa26.37■■□□□ 1.81
NDUFA3-213ENST00000484103 PNPLA7Q6ZV29 1317 aa26.37■■□□□ 1.81
NDUFA3-213ENST00000484103 TOGARAM1Q9Y4F4 1720 aa26.36■■□□□ 1.81
NDUFA3-213ENST00000484103 TUBGCP6Q96RT7 1819 aa26.35■■□□□ 1.81
NDUFA3-213ENST00000484103 PKD1L3Q7Z443 1732 aa26.35■■□□□ 1.81
NDUFA3-213ENST00000484103 SPG7Q9UQ90 795 aa26.35■■□□□ 1.81
NDUFA3-213ENST00000484103 MORC1Q86VD1 984 aa26.34■■□□□ 1.81
NDUFA3-213ENST00000484103 ARXQ96QS3 562 aa26.34■■□□□ 1.81
NDUFA3-213ENST00000484103 SGIP1Q9BQI5 828 aa26.33■■□□□ 1.81
NDUFA3-213ENST00000484103 PALLDQ8WX93 1383 aa26.33■■□□□ 1.8
NDUFA3-213ENST00000484103 YY1P25490 414 aa26.32■■□□□ 1.8
NDUFA3-213ENST00000484103 SYT17Q9BSW7 474 aa26.31■■□□□ 1.8
NDUFA3-213ENST00000484103 KNSTRNQ9Y448 316 aa26.31■■□□□ 1.8
NDUFA3-213ENST00000484103 NCAPD2Q15021 1401 aa26.31■■□□□ 1.8
NDUFA3-213ENST00000484103 CNGB1Q14028 1251 aaPredicted RBP26.3■■□□□ 1.8
NDUFA3-213ENST00000484103 ITGB4P16144 1822 aa26.3■■□□□ 1.8
NDUFA3-213ENST00000484103 MSL1Q68DK7 614 aa26.28■■□□□ 1.8
NDUFA3-213ENST00000484103 PIGBQ92521 554 aa26.28■■□□□ 1.8
NDUFA3-213ENST00000484103 KIF7Q2M1P5 1343 aa26.28■■□□□ 1.8
NDUFA3-213ENST00000484103 POLD1P28340 1107 aa26.27■■□□□ 1.8
NDUFA3-213ENST00000484103 C5P01031 1676 aa26.27■■□□□ 1.8
NDUFA3-213ENST00000484103 QSER1Q2KHR3 1735 aa26.27■■□□□ 1.8
NDUFA3-213ENST00000484103 COL23A1Q86Y22 540 aaPredicted RBP26.26■■□□□ 1.79
NDUFA3-213ENST00000484103 PHKG2P15735 406 aa26.25■■□□□ 1.79
NDUFA3-213ENST00000484103 SMIM5Q71RC9 77 aa26.25■■□□□ 1.79
NDUFA3-213ENST00000484103 TMOD3Q9NYL9 352 aa26.25■■□□□ 1.79
NDUFA3-213ENST00000484103 IFNL2Q8IZJ0 200 aa26.24■■□□□ 1.79
NDUFA3-213ENST00000484103 IGSF1Q8N6C5 1336 aa26.23■■□□□ 1.79
NDUFA3-213ENST00000484103 AEBP1Q8IUX7 1158 aa26.23■■□□□ 1.79
NDUFA3-213ENST00000484103 SLC16A10Q8TF71 515 aa26.23■■□□□ 1.79
NDUFA3-213ENST00000484103 PHF14O94880 888 aa26.22■■□□□ 1.79
NDUFA3-213ENST00000484103 NKX1-1Q15270 411 aaPredicted RBP26.22■■□□□ 1.79
NDUFA3-213ENST00000484103 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
NDUFA3-213ENST00000484103 SMARCC1Q92922 1105 aaPredicted RBP26.22■■□□□ 1.79
NDUFA3-213ENST00000484103 ASAP1Q9ULH1 1129 aa26.22■■□□□ 1.79
NDUFA3-213ENST00000484103 AK7Q96M32 723 aa26.21■■□□□ 1.79
NDUFA3-213ENST00000484103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.2■■□□□ 1.78
NDUFA3-213ENST00000484103 TAF1LQ8IZX4 1826 aa26.19■■□□□ 1.78
NDUFA3-213ENST00000484103 CC2D1BQ5T0F9 858 aaKnown RBP26.19■■□□□ 1.78
NDUFA3-213ENST00000484103 C4BP0C0L5 1744 aa26.18■■□□□ 1.78
NDUFA3-213ENST00000484103 ZNF530Q6P9A1 599 aaPredicted RBP26.18■■□□□ 1.78
NDUFA3-213ENST00000484103 AMER1Q5JTC6 1135 aaPredicted RBP26.17■■□□□ 1.78
NDUFA3-213ENST00000484103 AMIGO3Q86WK7 504 aa26.17■■□□□ 1.78
NDUFA3-213ENST00000484103 LOC102724428A0A0B4J2F2 783 aa26.16■■□□□ 1.78
NDUFA3-213ENST00000484103 SIK1P57059 783 aa26.16■■□□□ 1.78
NDUFA3-213ENST00000484103 PLEKHO1Q53GL0 409 aaPredicted RBP26.16■■□□□ 1.78
NDUFA3-213ENST00000484103 SULT6B1Q6IMI4 303 aa26.16■■□□□ 1.78
NDUFA3-213ENST00000484103 LINC00116Q8NCU8 138 aa26.16■■□□□ 1.78
NDUFA3-213ENST00000484103 NLGN2Q8NFZ4 835 aa26.16■■□□□ 1.78
NDUFA3-213ENST00000484103 GPR162Q16538 588 aa26.15■■□□□ 1.78
NDUFA3-213ENST00000484103 UTRNP46939 3433 aa26.14■■□□□ 1.78
NDUFA3-213ENST00000484103 ATP6V1AP38606 617 aa26.14■■□□□ 1.78
NDUFA3-213ENST00000484103 ATG3Q9NT62 314 aa26.14■■□□□ 1.78
NDUFA3-213ENST00000484103 ITPK1Q13572 414 aa26.13■■□□□ 1.77
NDUFA3-213ENST00000484103 RBM42Q9BTD8 480 aaKnown RBP26.13■■□□□ 1.77
NDUFA3-213ENST00000484103 MAP3K5Q99683 1374 aa26.11■■□□□ 1.77
NDUFA3-213ENST00000484103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.11■■□□□ 1.77
NDUFA3-213ENST00000484103 MTHFSP49914 203 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms