RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 KCNJ4P48050 445 aa14.15□□□□□ -0.14
SEC61A1-205ENST00000483956 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
SEC61A1-205ENST00000483956 MYO5BQ9ULV0 1848 aa14.15□□□□□ -0.14
SEC61A1-205ENST00000483956 TMEM131LA2VDJ0 1609 aa14.15□□□□□ -0.14
SEC61A1-205ENST00000483956 K7ELQ4 463 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-205ENST00000483956 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
SEC61A1-205ENST00000483956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■■□□□ 11.9
SEC61A1-205ENST00000483956 RBM27Q9P2N5 1060 aaKnown RBP14.15□□□□□ -0.15
SEC61A1-205ENST00000483956 DIP2CQ9Y2E4 1556 aa14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 YTHDC2Q9H6S0 1430 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 ARHGEF40Q8TER5 1519 aa14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 HMGN5P82970 282 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 NUTM2DQ5VT03 806 aaPredicted RBP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 ABCC4O15439 1325 aa14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 TBC1D9Q6ZT07 1266 aa14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 HDGFL2Q7Z4V5 671 aaPredicted RBP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 MRPL50Q8N5N7 158 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-205ENST00000483956 ANKRD45Q5TZF3 282 aa14.13□□□□□ -0.15
SEC61A1-205ENST00000483956 SLC52A1Q9NWF4 448 aa14.13□□□□□ -0.15
SEC61A1-205ENST00000483956 MPNDQ8N594 471 aa14.13□□□□□ -0.15
SEC61A1-205ENST00000483956 GAS2L2Q8NHY3 880 aa14.13□□□□□ -0.15
SEC61A1-205ENST00000483956 VAMP4O75379 141 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 YEATS2Q9ULM3 1422 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 RNF214Q8ND24 703 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 KIF24Q5T7B8 1368 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 PRKAR2BP31323 418 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 IDI1Q13907 227 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 NFE2L2Q16236 605 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 LMBRD1Q9NUN5 540 aa14.12□□□□□ -0.15
SEC61A1-205ENST00000483956 ATP7BP35670 1465 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 CERS3Q8IU89 383 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 C17orf53Q8N3J3 647 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 CFAP44Q96MT7 982 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 IFT57Q9NWB7 429 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 NEO1Q92859 1461 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 CDC45O75419 566 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 STK26Q9P289 416 aa14.11□□□□□ -0.15
SEC61A1-205ENST00000483956 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
SEC61A1-205ENST00000483956 ZNF853P0CG23 659 aa14.1□□□□□ -0.15
SEC61A1-205ENST00000483956 GNAI1P63096 354 aa14.1□□□□□ -0.15
SEC61A1-205ENST00000483956 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-205ENST00000483956 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 SYCE3A1L190 88 aa14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 NOLC1Q14978 699 aaKnown RBP eCLIP14.09□□□□□ -0.151e-8■□□□□ 8.2
SEC61A1-205ENST00000483956 MAP2P11137 1827 aaKnown RBP14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 KNDC1Q76NI1 1749 aa14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 IRX3P78415 501 aaPredicted RBP14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
SEC61A1-205ENST00000483956 GPT2Q8TD30 523 aa14.08□□□□□ -0.16
SEC61A1-205ENST00000483956 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
SEC61A1-205ENST00000483956 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
SEC61A1-205ENST00000483956 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
SEC61A1-205ENST00000483956 TEX2Q8IWB9 1127 aa14.08□□□□□ -0.16
SEC61A1-205ENST00000483956 PIBF1Q8WXW3 757 aa14.08□□□□□ -0.16
SEC61A1-205ENST00000483956 SECISBP2LQ93073 1101 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 DLG5Q8TDM6 1919 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 RABEP1Q15276 862 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 DNAJC2Q99543 621 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 API5Q9BZZ5 524 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 AK9Q5TCS8 1911 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 PHACTR3Q96KR7 559 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
SEC61A1-205ENST00000483956 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
SEC61A1-205ENST00000483956 RICTORQ6R327 1708 aa14.06□□□□□ -0.16
SEC61A1-205ENST00000483956 GSPT1P15170 499 aaKnown RBP14.06□□□□□ -0.16
SEC61A1-205ENST00000483956 SLC20A2Q08357 652 aa14.06□□□□□ -0.16
SEC61A1-205ENST00000483956 ANKRD7Q92527 254 aa14.06□□□□□ -0.16
SEC61A1-205ENST00000483956 MBIPQ9NS73 344 aa14.06□□□□□ -0.16
SEC61A1-205ENST00000483956 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
SEC61A1-205ENST00000483956 SLFN14P0C7P3 912 aa14.05□□□□□ -0.16
SEC61A1-205ENST00000483956 LMOD3Q0VAK6 560 aa14.05□□□□□ -0.16
SEC61A1-205ENST00000483956 PKP1Q13835 747 aa14.05□□□□□ -0.16
SEC61A1-205ENST00000483956 AEBP1Q8IUX7 1158 aa14.05□□□□□ -0.16
SEC61A1-205ENST00000483956 PLEKHM2Q8IWE5 1019 aa14.05□□□□□ -0.16
SEC61A1-205ENST00000483956 TWISTNBQ3B726 338 aaPredicted RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 OGFRQ9NZT2 677 aa14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 FEZ1Q99689 392 aa14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 DCTPP1Q9H773 170 aa14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 TTC12Q9H892 705 aaPredicted RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 CYP2E1P05181 493 aaPredicted RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 IL13P35225 146 aa14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 NUCB2P80303 420 aa14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 NSFL1CQ9UNZ2 370 aaKnown RBP14.04□□□□□ -0.16
SEC61A1-205ENST00000483956 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms