RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 KIAA0232Q92628 1395 aa7.21□□□□□ -1.25
COL17A1-206ENST00000483876 SSH2Q76I76 1423 aa7.21□□□□□ -1.25
COL17A1-206ENST00000483876 LBX1P52954 281 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 NCBP3Q53F19 620 aaKnown RBP7.21□□□□□ -1.26
COL17A1-206ENST00000483876 ERICH6BQ5W0A0 696 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 HDGFL2Q7Z4V5 671 aaPredicted RBP7.21□□□□□ -1.26
COL17A1-206ENST00000483876 MORC1Q86VD1 984 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 ZNF692Q9BU19 519 aaPredicted RBP7.21□□□□□ -1.26
COL17A1-206ENST00000483876 CD2APQ9Y5K6 639 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 CCDC61Q9Y6R9 512 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 ATP7BP35670 1465 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 TOPAZ1Q8N9V7 1692 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 PEAK1Q9H792 1746 aa7.21□□□□□ -1.26
COL17A1-206ENST00000483876 NSD3Q9BZ95 1437 aa7.2□□□□□ -1.26
COL17A1-206ENST00000483876 CNGB1Q14028 1251 aaPredicted RBP7.2□□□□□ -1.26
COL17A1-206ENST00000483876 SAFB2Q14151 953 aaKnown RBP eCLIP7.2□□□□□ -1.26
COL17A1-206ENST00000483876 DDB1Q16531 1140 aa7.2□□□□□ -1.26
COL17A1-206ENST00000483876 CABP1Q9NZU7 370 aa7.2□□□□□ -1.26
COL17A1-206ENST00000483876 KNDC1Q76NI1 1749 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 PLEKHG3A1L390 1219 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 DLL1O00548 723 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 FYB1O15117 783 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 PRPF38BQ5VTL8 546 aaKnown RBP7.19□□□□□ -1.26
COL17A1-206ENST00000483876 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
COL17A1-206ENST00000483876 ADAMTS8Q9UP79 889 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 PLEKHH1Q9ULM0 1364 aa7.19□□□□□ -1.26
COL17A1-206ENST00000483876 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
COL17A1-206ENST00000483876 SMG6Q86US8 1419 aaKnown RBP7.18□□□□□ -1.26
COL17A1-206ENST00000483876 ZC3H6P61129 1189 aaKnown RBP7.18□□□□□ -1.26
COL17A1-206ENST00000483876 WDR43Q15061 677 aaKnown RBP eCLIP7.18□□□□□ -1.26
COL17A1-206ENST00000483876 AKT1S1Q96B36 256 aa7.18□□□□□ -1.26
COL17A1-206ENST00000483876 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
COL17A1-206ENST00000483876 A0A1W2PP64 1363 aa7.18□□□□□ -1.26
COL17A1-206ENST00000483876 CD163L1Q9NR16 1453 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 PAPPAQ13219 1627 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 MARCH10Q8NA82 808 aaPredicted RBP7.17□□□□□ -1.26
COL17A1-206ENST00000483876 CFAP53Q96M91 514 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 RRAGCQ9HB90 399 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 TFCP2L1Q9NZI6 479 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 NUDCQ9Y266 331 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 PARP4Q9UKK3 1724 aaKnown RBP7.17□□□□□ -1.26
COL17A1-206ENST00000483876 IGSF1Q8N6C5 1336 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 BCL9O00512 1426 aa7.17□□□□□ -1.26
COL17A1-206ENST00000483876 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
COL17A1-206ENST00000483876 COL24A1Q17RW2 1714 aa7.16□□□□□ -1.26
COL17A1-206ENST00000483876 SBF2Q86WG5 1849 aa7.16□□□□□ -1.26
COL17A1-206ENST00000483876 NEFLP07196 543 aa7.16□□□□□ -1.26
COL17A1-206ENST00000483876 MTHFSP49914 203 aa7.16□□□□□ -1.26
COL17A1-206ENST00000483876 LRRC4BQ9NT99 713 aa7.16□□□□□ -1.26
COL17A1-206ENST00000483876 KDM2BQ8NHM5 1336 aa7.16□□□□□ -1.26
COL17A1-206ENST00000483876 FMN2Q9NZ56 1722 aa7.15□□□□□ -1.26
COL17A1-206ENST00000483876 RNF123Q5XPI4 1314 aa7.15□□□□□ -1.26
COL17A1-206ENST00000483876 EDC4Q6P2E9 1401 aaKnown RBP7.15□□□□□ -1.27
COL17A1-206ENST00000483876 PPIP5K1Q6PFW1 1433 aa7.15□□□□□ -1.27
COL17A1-206ENST00000483876 C10orf71Q711Q0 1435 aa7.15□□□□□ -1.27
COL17A1-206ENST00000483876 PAK3O75914 559 aaPredicted RBP7.14□□□□□ -1.27
COL17A1-206ENST00000483876 MSL1Q68DK7 614 aa7.14□□□□□ -1.27
COL17A1-206ENST00000483876 PNNQ9H307 717 aaKnown RBP7.14□□□□□ -1.27
COL17A1-206ENST00000483876 SUPT16HQ9Y5B9 1047 aaKnown RBP7.14□□□□□ -1.27
COL17A1-206ENST00000483876 TNRC18O15417 2968 aaPredicted RBP7.13□□□□□ -1.27
COL17A1-206ENST00000483876 PXDNLA1KZ92 1463 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 ZNF521Q96K83 1311 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 PRR36Q9H6K5 1346 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 HSPA8P11142 646 aaKnown RBP7.13□□□□□ -1.27
COL17A1-206ENST00000483876 CCDC27Q2M243 656 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 GGNBP2Q9H3C7 697 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 WBP1LQ9NX94 342 aa7.13□□□□□ -1.27
COL17A1-206ENST00000483876 LRRC37A3O60309 1634 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 CICQ96RK0 1608 aaPredicted RBP7.12□□□□□ -1.27
COL17A1-206ENST00000483876 KCPQ6ZWJ8 1503 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 CRB1P82279 1406 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 ANKARQ7Z5J8 1434 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 PLEKHG2Q9H7P9 1386 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 GOLGA2Q08379 1002 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 FKBP8Q14318 412 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 TRMT2AQ8IZ69 625 aaKnown RBP7.12□□□□□ -1.27
COL17A1-206ENST00000483876 GCC1Q96CN9 775 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 CREBZFQ9NS37 354 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
COL17A1-206ENST00000483876 ACEP12821 1306 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 TTC21AQ8NDW8 1320 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 FCHSD2O94868 740 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 C9orf131Q5VYM1 1079 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 ARHGAP27Q6ZUM4 889 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 WDR63Q8IWG1 891 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 COG3Q96JB2 828 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 POLKQ9UBT6 870 aa7.11□□□□□ -1.27
COL17A1-206ENST00000483876 TRPM3Q9HCF6 1732 aaPredicted RBP7.1□□□□□ -1.27
COL17A1-206ENST00000483876 CRYBG1Q9Y4K1 1723 aa7.1□□□□□ -1.27
COL17A1-206ENST00000483876 TTC21BQ7Z4L5 1316 aa7.1□□□□□ -1.27
COL17A1-206ENST00000483876 APAF1O14727 1248 aa7.1□□□□□ -1.27
COL17A1-206ENST00000483876 DIAPH1O60610 1272 aaKnown RBP7.1□□□□□ -1.27
COL17A1-206ENST00000483876 TNNT2P45379 298 aaPredicted RBP7.1□□□□□ -1.27
COL17A1-206ENST00000483876 SLFN5Q08AF3 891 aa7.1□□□□□ -1.27
COL17A1-206ENST00000483876 SLC27A3Q5K4L6 730 aa7.1□□□□□ -1.27
COL17A1-206ENST00000483876 COL23A1Q86Y22 540 aaPredicted RBP7.1□□□□□ -1.27
COL17A1-206ENST00000483876 ANKRD26Q9UPS8 1709 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms