RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 CRB1P82279 1406 aa21.09■□□□□ 0.97
RFTN1-209ENST00000483671 JCADQ9P266 1359 aa21.08■□□□□ 0.97
RFTN1-209ENST00000483671 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
RFTN1-209ENST00000483671 CFAP44Q96MT7 982 aa21.08■□□□□ 0.97
RFTN1-209ENST00000483671 NEFLP07196 543 aa21.07■□□□□ 0.96
RFTN1-209ENST00000483671 CARD10Q9BWT7 1032 aa21.07■□□□□ 0.96
RFTN1-209ENST00000483671 RAPGEF4Q8WZA2 1011 aa21.06■□□□□ 0.96
RFTN1-209ENST00000483671 RTF1Q92541 710 aaKnown RBP21.06■□□□□ 0.96
RFTN1-209ENST00000483671 THUMPD2Q9BTF0 503 aaKnown RBP21.06■□□□□ 0.96
RFTN1-209ENST00000483671 OVOS2A0A0G2JMS6 1433 aa21.06■□□□□ 0.96
RFTN1-209ENST00000483671 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
RFTN1-209ENST00000483671 MEGF6O75095 1541 aa21.05■□□□□ 0.96
RFTN1-209ENST00000483671 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
RFTN1-209ENST00000483671 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
RFTN1-209ENST00000483671 PKD1L3Q7Z443 1732 aa21.04■□□□□ 0.96
RFTN1-209ENST00000483671 CHL1O00533 1208 aa21.04■□□□□ 0.96
RFTN1-209ENST00000483671 DCTN1Q14203 1278 aa21.04■□□□□ 0.96
RFTN1-209ENST00000483671 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
RFTN1-209ENST00000483671 MCM10Q7L590 875 aa21.04■□□□□ 0.96
RFTN1-209ENST00000483671 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
RFTN1-209ENST00000483671 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
RFTN1-209ENST00000483671 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
RFTN1-209ENST00000483671 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
RFTN1-209ENST00000483671 ZNF530Q6P9A1 599 aaPredicted RBP21.03■□□□□ 0.96
RFTN1-209ENST00000483671 BTG4Q9NY30 223 aa21.03■□□□□ 0.96
RFTN1-209ENST00000483671 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
RFTN1-209ENST00000483671 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
RFTN1-209ENST00000483671 EVA1CP58658 441 aa21.02■□□□□ 0.95
RFTN1-209ENST00000483671 LARP1Q6PKG0 1096 aaKnown RBP21.02■□□□□ 0.95
RFTN1-209ENST00000483671 MBIPQ9NS73 344 aa21.02■□□□□ 0.95
RFTN1-209ENST00000483671 PLCH1Q4KWH8 1693 aa21.01■□□□□ 0.95
RFTN1-209ENST00000483671 SPATA31A6Q5VVP1 1343 aa21.01■□□□□ 0.95
RFTN1-209ENST00000483671 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
RFTN1-209ENST00000483671 ZNF428Q96B54 188 aa21.01■□□□□ 0.95
RFTN1-209ENST00000483671 SPG7Q9UQ90 795 aa21.01■□□□□ 0.95
RFTN1-209ENST00000483671 NWD2Q9ULI1 1742 aa21■□□□□ 0.95
RFTN1-209ENST00000483671 EXOSC9Q06265 439 aaKnown RBP21■□□□□ 0.95
RFTN1-209ENST00000483671 C1orf141Q5JVX7 400 aa21■□□□□ 0.95
RFTN1-209ENST00000483671 NRAPQ86VF7 1730 aa21■□□□□ 0.95
RFTN1-209ENST00000483671 SLIT2O94813 1529 aa20.99■□□□□ 0.95
RFTN1-209ENST00000483671 STRN4Q9NRL3 753 aa20.99■□□□□ 0.95
RFTN1-209ENST00000483671 RARSP54136 660 aaKnown RBP20.98■□□□□ 0.95
RFTN1-209ENST00000483671 FKBP8Q14318 412 aa20.98■□□□□ 0.95
RFTN1-209ENST00000483671 LAS1LQ9Y4W2 734 aaKnown RBP20.97■□□□□ 0.95
RFTN1-209ENST00000483671 ADAMTS2O95450 1211 aa20.96■□□□□ 0.95
RFTN1-209ENST00000483671 IL2RBP14784 551 aa20.96■□□□□ 0.95
RFTN1-209ENST00000483671 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
RFTN1-209ENST00000483671 PHKG2P15735 406 aa20.95■□□□□ 0.94
RFTN1-209ENST00000483671 TAF7Q15545 349 aaPredicted RBP20.95■□□□□ 0.94
RFTN1-209ENST00000483671 IFNL2Q8IZJ0 200 aa20.95■□□□□ 0.94
RFTN1-209ENST00000483671 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.95■□□□□ 0.94
RFTN1-209ENST00000483671 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
RFTN1-209ENST00000483671 HSPA1LP34931 641 aa20.94■□□□□ 0.94
RFTN1-209ENST00000483671 NUTM2BA6NNL0 878 aaPredicted RBP20.93■□□□□ 0.94
RFTN1-209ENST00000483671 NUTM2EB1AL46 878 aaPredicted RBP20.93■□□□□ 0.94
RFTN1-209ENST00000483671 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
RFTN1-209ENST00000483671 ALDH1L2Q3SY69 923 aa20.93■□□□□ 0.94
RFTN1-209ENST00000483671 NUTM2AQ8IVF1 878 aaPredicted RBP20.93■□□□□ 0.94
RFTN1-209ENST00000483671 PCDH11XQ9BZA7 1347 aa20.93■□□□□ 0.94
RFTN1-209ENST00000483671 PCDH11YQ9BZA8 1340 aa20.93■□□□□ 0.94
RFTN1-209ENST00000483671 VAMP4O75379 141 aa20.92■□□□□ 0.94
RFTN1-209ENST00000483671 BRPF1P55201 1214 aaPredicted RBP20.92■□□□□ 0.94
RFTN1-209ENST00000483671 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
RFTN1-209ENST00000483671 LGR6Q9HBX8 967 aa20.92■□□□□ 0.94
RFTN1-209ENST00000483671 MRC1P22897 1456 aa20.92■□□□□ 0.94
RFTN1-209ENST00000483671 SOS1Q07889 1333 aaPredicted RBP20.92■□□□□ 0.94
RFTN1-209ENST00000483671 KDM6AO15550 1401 aaPredicted RBP20.91■□□□□ 0.94
RFTN1-209ENST00000483671 CYP27B1O15528 508 aa20.91■□□□□ 0.94
RFTN1-209ENST00000483671 BCAR3O75815 825 aa20.91■□□□□ 0.94
RFTN1-209ENST00000483671 TSPYL4Q9UJ04 414 aa20.91■□□□□ 0.94
RFTN1-209ENST00000483671 THRAP3Q9Y2W1 955 aaKnown RBP20.91■□□□□ 0.94
RFTN1-209ENST00000483671 LRP6O75581 1613 aa20.91■□□□□ 0.94
RFTN1-209ENST00000483671 SCN11AQ9UI33 1791 aa20.9■□□□□ 0.94
RFTN1-209ENST00000483671 MPRIPQ6WCQ1 1025 aa20.9■□□□□ 0.94
RFTN1-209ENST00000483671 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
RFTN1-209ENST00000483671 CDCA7Q9BWT1 371 aaPredicted RBP20.9■□□□□ 0.94
RFTN1-209ENST00000483671 SIPA1L3O60292 1781 aaPredicted RBP20.9■□□□□ 0.94
RFTN1-209ENST00000483671 VIRMAQ69YN4 1812 aaKnown RBP20.89■□□□□ 0.94
RFTN1-209ENST00000483671 NKX1-1Q15270 411 aaPredicted RBP20.89■□□□□ 0.93
RFTN1-209ENST00000483671 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.93
RFTN1-209ENST00000483671 FNBP4Q8N3X1 1017 aaPredicted RBP20.89■□□□□ 0.93
RFTN1-209ENST00000483671 C8orf58Q8NAV2 365 aa20.89■□□□□ 0.93
RFTN1-209ENST00000483671 SPATA31A1Q5TZJ5 1347 aa20.89■□□□□ 0.93
RFTN1-209ENST00000483671 SHANK3Q9BYB0 1731 aa20.89■□□□□ 0.93
RFTN1-209ENST00000483671 WNK3Q9BYP7 1800 aa20.89■□□□□ 0.93
RFTN1-209ENST00000483671 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
RFTN1-209ENST00000483671 TEFQ10587 303 aa20.88■□□□□ 0.93
RFTN1-209ENST00000483671 TSPYL6Q8N831 410 aa20.88■□□□□ 0.93
RFTN1-209ENST00000483671 IRX6P78412 446 aaPredicted RBP20.87■□□□□ 0.93
RFTN1-209ENST00000483671 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
RFTN1-209ENST00000483671 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
RFTN1-209ENST00000483671 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
RFTN1-209ENST00000483671 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
RFTN1-209ENST00000483671 BCL9LQ86UU0 1499 aa20.87■□□□□ 0.93
RFTN1-209ENST00000483671 PDE3AQ14432 1141 aa20.86■□□□□ 0.93
RFTN1-209ENST00000483671 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.86■□□□□ 0.93
RFTN1-209ENST00000483671 PLIN1O60240 522 aa20.85■□□□□ 0.93
RFTN1-209ENST00000483671 SMC4Q9NTJ3 1288 aa20.85■□□□□ 0.93
RFTN1-209ENST00000483671 MIS18AQ9NYP9 233 aa20.85■□□□□ 0.93
RFTN1-209ENST00000483671 BARGINQ6ZT62 677 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms