RNA–Protein interactions for RNA: ENST00000483250.5

STRC-210, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-210ENST00000483250 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
STRC-210ENST00000483250 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
STRC-210ENST00000483250 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
STRC-210ENST00000483250 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
STRC-210ENST00000483250 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
STRC-210ENST00000483250 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
STRC-210ENST00000483250 PCDH11XQ9BZA7 1347 aa18.54■□□□□ 0.56
STRC-210ENST00000483250 PCDH11YQ9BZA8 1340 aa18.54■□□□□ 0.56
STRC-210ENST00000483250 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
STRC-210ENST00000483250 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
STRC-210ENST00000483250 ZNF316A6NFI3 1004 aaPredicted RBP18.53■□□□□ 0.56
STRC-210ENST00000483250 PTF1AQ7RTS3 328 aa18.53■□□□□ 0.56
STRC-210ENST00000483250 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.56
STRC-210ENST00000483250 KCNQ2O43526 872 aa18.52■□□□□ 0.56
STRC-210ENST00000483250 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.56
STRC-210ENST00000483250 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
STRC-210ENST00000483250 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
STRC-210ENST00000483250 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
STRC-210ENST00000483250 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
STRC-210ENST00000483250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.55
STRC-210ENST00000483250 PARD3Q8TEW0 1356 aa18.5■□□□□ 0.55
STRC-210ENST00000483250 CYP27B1O15528 508 aa18.49■□□□□ 0.55
STRC-210ENST00000483250 HMOX1P09601 288 aa18.49■□□□□ 0.55
STRC-210ENST00000483250 CAMKK2Q96RR4 588 aa18.49■□□□□ 0.55
STRC-210ENST00000483250 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
STRC-210ENST00000483250 RALBP1Q15311 655 aa18.48■□□□□ 0.55
STRC-210ENST00000483250 SBF2Q86WG5 1849 aa18.48■□□□□ 0.55
STRC-210ENST00000483250 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
STRC-210ENST00000483250 SHANK3Q9BYB0 1731 aa18.47■□□□□ 0.55
STRC-210ENST00000483250 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
STRC-210ENST00000483250 IFNL2Q8IZJ0 200 aa18.47■□□□□ 0.55
STRC-210ENST00000483250 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
STRC-210ENST00000483250 KDRP35968 1356 aa18.46■□□□□ 0.55
STRC-210ENST00000483250 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
STRC-210ENST00000483250 PLSCR1O15162 318 aa18.46■□□□□ 0.55
STRC-210ENST00000483250 NHSQ6T4R5 1651 aa18.46■□□□□ 0.55
STRC-210ENST00000483250 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
STRC-210ENST00000483250 PHKG2P15735 406 aa18.45■□□□□ 0.54
STRC-210ENST00000483250 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
STRC-210ENST00000483250 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
STRC-210ENST00000483250 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
STRC-210ENST00000483250 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
STRC-210ENST00000483250 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
STRC-210ENST00000483250 DOT1LQ8TEK3 1739 aa18.42■□□□□ 0.54
STRC-210ENST00000483250 HSP90AB1P08238 724 aaKnown RBP18.41■□□□□ 0.54
STRC-210ENST00000483250 MPRIPQ6WCQ1 1025 aa18.41■□□□□ 0.54
STRC-210ENST00000483250 TXNRD1Q16881 649 aa18.4■□□□□ 0.54
STRC-210ENST00000483250 NBPF14Q5TI25 921 aa18.4■□□□□ 0.54
STRC-210ENST00000483250 MYBBP1AQ9BQG0 1328 aaKnown RBP18.4■□□□□ 0.54
STRC-210ENST00000483250 BTAF1O14981 1849 aa18.38■□□□□ 0.53
STRC-210ENST00000483250 PROM2Q8N271 834 aa18.38■□□□□ 0.53
STRC-210ENST00000483250 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
STRC-210ENST00000483250 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
STRC-210ENST00000483250 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
STRC-210ENST00000483250 PSDA5PKW4 1024 aaPredicted RBP18.37■□□□□ 0.53
STRC-210ENST00000483250 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
STRC-210ENST00000483250 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
STRC-210ENST00000483250 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
STRC-210ENST00000483250 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
STRC-210ENST00000483250 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
STRC-210ENST00000483250 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
STRC-210ENST00000483250 R3HDM1Q15032 1099 aaKnown RBP18.36■□□□□ 0.53
STRC-210ENST00000483250 PIGBQ92521 554 aa18.36■□□□□ 0.53
STRC-210ENST00000483250 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
STRC-210ENST00000483250 RREB1Q92766 1687 aa18.35■□□□□ 0.53
STRC-210ENST00000483250 ERVV-2B6SEH9 535 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 FCHSD2O94868 740 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 CABP4P57796 275 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
STRC-210ENST00000483250 NUP188Q5SRE5 1749 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 TOGARAM1Q9Y4F4 1720 aa18.34■□□□□ 0.53
STRC-210ENST00000483250 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
STRC-210ENST00000483250 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
STRC-210ENST00000483250 NEFMP07197 916 aa18.32■□□□□ 0.52
STRC-210ENST00000483250 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
STRC-210ENST00000483250 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
STRC-210ENST00000483250 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
STRC-210ENST00000483250 KCNQ4P56696 695 aa18.31■□□□□ 0.52
STRC-210ENST00000483250 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
STRC-210ENST00000483250 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
STRC-210ENST00000483250 ASAP1Q9ULH1 1129 aa18.3■□□□□ 0.52
STRC-210ENST00000483250 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
STRC-210ENST00000483250 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
STRC-210ENST00000483250 ANP32CO43423 234 aa18.29■□□□□ 0.52
STRC-210ENST00000483250 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
STRC-210ENST00000483250 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
STRC-210ENST00000483250 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
STRC-210ENST00000483250 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
STRC-210ENST00000483250 ITGB4P16144 1822 aa18.28■□□□□ 0.52
STRC-210ENST00000483250 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
STRC-210ENST00000483250 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
STRC-210ENST00000483250 SLC15A2Q16348 729 aa18.27■□□□□ 0.52
STRC-210ENST00000483250 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
STRC-210ENST00000483250 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
STRC-210ENST00000483250 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
STRC-210ENST00000483250 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
STRC-210ENST00000483250 SIK1P57059 783 aa18.25■□□□□ 0.51
STRC-210ENST00000483250 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms