RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 TNNT2P45379 298 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-207ENST00000483128 RAPGEF4Q8WZA2 1011 aa19.37■□□□□ 0.69
SHANK1-207ENST00000483128 SYTL4Q96C24 671 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-207ENST00000483128 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
SHANK1-207ENST00000483128 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
SHANK1-207ENST00000483128 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
SHANK1-207ENST00000483128 BTAF1O14981 1849 aa19.35■□□□□ 0.69
SHANK1-207ENST00000483128 PRIM1P49642 420 aaKnown RBP19.34■□□□□ 0.69
SHANK1-207ENST00000483128 PDGFDQ9GZP0 370 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-207ENST00000483128 MAP2P11137 1827 aaKnown RBP19.33■□□□□ 0.69
SHANK1-207ENST00000483128 SPON1Q9HCB6 807 aa19.33■□□□□ 0.68
SHANK1-207ENST00000483128 POLKQ9UBT6 870 aa19.33■□□□□ 0.68
SHANK1-207ENST00000483128 SLC15A2Q16348 729 aa19.32■□□□□ 0.68
SHANK1-207ENST00000483128 SHANK3Q9BYB0 1731 aa19.31■□□□□ 0.68
SHANK1-207ENST00000483128 WASHC2AQ641Q2 1341 aa19.31■□□□□ 0.68
SHANK1-207ENST00000483128 DOT1LQ8TEK3 1739 aa19.29■□□□□ 0.68
SHANK1-207ENST00000483128 ZBTB7AO95365 584 aa19.29■□□□□ 0.68
SHANK1-207ENST00000483128 LRRC4BQ9NT99 713 aa19.29■□□□□ 0.68
SHANK1-207ENST00000483128 PPP1R1BQ9UD71 204 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-207ENST00000483128 KCNQ4P56696 695 aa19.28■□□□□ 0.68
SHANK1-207ENST00000483128 EYA1Q99502 592 aa19.28■□□□□ 0.68
SHANK1-207ENST00000483128 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
SHANK1-207ENST00000483128 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
SHANK1-207ENST00000483128 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
SHANK1-207ENST00000483128 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-207ENST00000483128 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
SHANK1-207ENST00000483128 NSD2O96028 1365 aa19.26■□□□□ 0.67
SHANK1-207ENST00000483128 CASZ1Q86V15 1759 aa19.26■□□□□ 0.67
SHANK1-207ENST00000483128 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
SHANK1-207ENST00000483128 CYP27B1O15528 508 aa19.25■□□□□ 0.67
SHANK1-207ENST00000483128 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
SHANK1-207ENST00000483128 ZNF827Q17R98 1081 aa19.25■□□□□ 0.67
SHANK1-207ENST00000483128 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
SHANK1-207ENST00000483128 SLC27A3Q5K4L6 730 aa19.24■□□□□ 0.67
SHANK1-207ENST00000483128 PAPPAQ13219 1627 aa19.22■□□□□ 0.67
SHANK1-207ENST00000483128 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
SHANK1-207ENST00000483128 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
SHANK1-207ENST00000483128 NCAPD2Q15021 1401 aa19.22■□□□□ 0.67
SHANK1-207ENST00000483128 CCNL1Q9UK58 526 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-207ENST00000483128 PTGER2P43116 358 aa19.2■□□□□ 0.66
SHANK1-207ENST00000483128 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
SHANK1-207ENST00000483128 MTFR1LQ9H019 292 aa19.19■□□□□ 0.66
SHANK1-207ENST00000483128 PKD1L3Q7Z443 1732 aa19.19■□□□□ 0.66
SHANK1-207ENST00000483128 TFCP2L1Q9NZI6 479 aa19.18■□□□□ 0.66
SHANK1-207ENST00000483128 LY75O60449 1722 aa19.17■□□□□ 0.66
SHANK1-207ENST00000483128 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
SHANK1-207ENST00000483128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.17■□□□□ 0.66
SHANK1-207ENST00000483128 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
SHANK1-207ENST00000483128 TOGARAM1Q9Y4F4 1720 aa19.15■□□□□ 0.66
SHANK1-207ENST00000483128 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-207ENST00000483128 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-207ENST00000483128 IFNL2Q8IZJ0 200 aa19.15■□□□□ 0.66
SHANK1-207ENST00000483128 PIGBQ92521 554 aa19.15■□□□□ 0.66
SHANK1-207ENST00000483128 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
SHANK1-207ENST00000483128 PALLDQ8WX93 1383 aa19.15■□□□□ 0.66
SHANK1-207ENST00000483128 ITGB4P16144 1822 aa19.14■□□□□ 0.65
SHANK1-207ENST00000483128 PHKG2P15735 406 aa19.14■□□□□ 0.65
SHANK1-207ENST00000483128 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
SHANK1-207ENST00000483128 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
SHANK1-207ENST00000483128 SGIP1Q9BQI5 828 aa19.13■□□□□ 0.65
SHANK1-207ENST00000483128 PER1O15534 1290 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-207ENST00000483128 MSH5O43196 834 aa19.12■□□□□ 0.65
SHANK1-207ENST00000483128 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
SHANK1-207ENST00000483128 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-207ENST00000483128 FHDC1Q9C0D6 1143 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-207ENST00000483128 TUBGCP6Q96RT7 1819 aa19.1■□□□□ 0.65
SHANK1-207ENST00000483128 MTHFSP49914 203 aa19.1■□□□□ 0.65
SHANK1-207ENST00000483128 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-207ENST00000483128 SULT6B1Q6IMI4 303 aa19.1■□□□□ 0.65
SHANK1-207ENST00000483128 SLC16A10Q8TF71 515 aa19.1■□□□□ 0.65
SHANK1-207ENST00000483128 ARXQ96QS3 562 aa19.1■□□□□ 0.65
SHANK1-207ENST00000483128 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
SHANK1-207ENST00000483128 IL13P35225 146 aa19.09■□□□□ 0.65
SHANK1-207ENST00000483128 SYT17Q9BSW7 474 aa19.09■□□□□ 0.65
SHANK1-207ENST00000483128 ASAP1Q9ULH1 1129 aa19.09■□□□□ 0.65
SHANK1-207ENST00000483128 ZNF530Q6P9A1 599 aaPredicted RBP19.08■□□□□ 0.64
SHANK1-207ENST00000483128 COL23A1Q86Y22 540 aaPredicted RBP19.08■□□□□ 0.64
SHANK1-207ENST00000483128 QSER1Q2KHR3 1735 aa19.08■□□□□ 0.64
SHANK1-207ENST00000483128 C5P01031 1676 aa19.07■□□□□ 0.64
SHANK1-207ENST00000483128 LOC102724428A0A0B4J2F2 783 aa19.06■□□□□ 0.64
SHANK1-207ENST00000483128 POLD1P28340 1107 aa19.06■□□□□ 0.64
SHANK1-207ENST00000483128 SIK1P57059 783 aa19.06■□□□□ 0.64
SHANK1-207ENST00000483128 AMOTQ4VCS5 1084 aa19.06■□□□□ 0.64
SHANK1-207ENST00000483128 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
SHANK1-207ENST00000483128 HSP90AB1P08238 724 aaKnown RBP19.05■□□□□ 0.64
SHANK1-207ENST00000483128 DCAF5Q96JK2 942 aa19.05■□□□□ 0.64
SHANK1-207ENST00000483128 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
SHANK1-207ENST00000483128 PLEKHG2Q9H7P9 1386 aa19.05■□□□□ 0.64
SHANK1-207ENST00000483128 TAF1LQ8IZX4 1826 aa19.04■□□□□ 0.64
SHANK1-207ENST00000483128 C1orf141Q5JVX7 400 aa19.04■□□□□ 0.64
SHANK1-207ENST00000483128 MSL1Q68DK7 614 aa19.04■□□□□ 0.64
SHANK1-207ENST00000483128 SMIM5Q71RC9 77 aa19.04■□□□□ 0.64
SHANK1-207ENST00000483128 AK7Q96M32 723 aa19.04■□□□□ 0.64
SHANK1-207ENST00000483128 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
SHANK1-207ENST00000483128 HMOX1P09601 288 aa19.03■□□□□ 0.64
SHANK1-207ENST00000483128 HMGB2P26583 209 aaKnown RBP19.03■□□□□ 0.64
SHANK1-207ENST00000483128 ATP6V1AP38606 617 aa19.03■□□□□ 0.64
SHANK1-207ENST00000483128 PHF14O94880 888 aa19.02■□□□□ 0.64
SHANK1-207ENST00000483128 CABP4P57796 275 aa19.02■□□□□ 0.64
SHANK1-207ENST00000483128 AMIGO3Q86WK7 504 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms