RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 GMCL1Q96IK5 515 aa8.7□□□□□ -1.02
RPA3-207ENST00000483031 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
RPA3-207ENST00000483031 USP17L8P0C7I0 530 aa8.69□□□□□ -1.02
RPA3-207ENST00000483031 RNF144AP50876 292 aaPredicted RBP8.69□□□□□ -1.02
RPA3-207ENST00000483031 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
RPA3-207ENST00000483031 PRICKLE2Q7Z3G6 844 aa8.69□□□□□ -1.02
RPA3-207ENST00000483031 HMX1Q9NP08 348 aaPredicted RBP8.69□□□□□ -1.02
RPA3-207ENST00000483031 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
RPA3-207ENST00000483031 RHOQP17081 205 aa8.68□□□□□ -1.02
RPA3-207ENST00000483031 ZNF837Q96EG3 531 aaPredicted RBP8.68□□□□□ -1.02
RPA3-207ENST00000483031 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
RPA3-207ENST00000483031 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
RPA3-207ENST00000483031 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
RPA3-207ENST00000483031 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
RPA3-207ENST00000483031 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
RPA3-207ENST00000483031 FAM117AQ9C073 453 aa8.66□□□□□ -1.02
RPA3-207ENST00000483031 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
RPA3-207ENST00000483031 GPBP1L1Q9HC44 474 aaPredicted RBP8.65□□□□□ -1.02
RPA3-207ENST00000483031 IGF1RP08069 1367 aa8.64□□□□□ -1.03
RPA3-207ENST00000483031 MEN1O00255 615 aa8.64□□□□□ -1.03
RPA3-207ENST00000483031 GPC1P35052 558 aa8.64□□□□□ -1.03
RPA3-207ENST00000483031 H7C1W4 665 aa8.63□□□□□ -1.03
RPA3-207ENST00000483031 GPR25O00155 361 aa8.63□□□□□ -1.03
RPA3-207ENST00000483031 PODNQ7Z5L7 613 aa8.63□□□□□ -1.03
RPA3-207ENST00000483031 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
RPA3-207ENST00000483031 BCRP11274 1271 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 RFC5P40937 340 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 DBN1Q16643 649 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
RPA3-207ENST00000483031 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 TRERF1Q96PN7 1200 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 DYRK1BQ9Y463 629 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 PCDHB9Q9Y5E1 797 aa8.62□□□□□ -1.03
RPA3-207ENST00000483031 CNTNAP5Q8WYK1 1306 aa8.61□□□□□ -1.03
RPA3-207ENST00000483031 ZBBXA8MT70 800 aa8.61□□□□□ -1.03
RPA3-207ENST00000483031 MSTNO14793 375 aa8.61□□□□□ -1.03
RPA3-207ENST00000483031 NLRP3Q96P20 1036 aa8.61□□□□□ -1.03
RPA3-207ENST00000483031 A0A1W2PRU2 124 aa8.6□□□□□ -1.03
RPA3-207ENST00000483031 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
RPA3-207ENST00000483031 SLC27A3Q5K4L6 730 aa8.6□□□□□ -1.03
RPA3-207ENST00000483031 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
RPA3-207ENST00000483031 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
RPA3-207ENST00000483031 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
RPA3-207ENST00000483031 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
RPA3-207ENST00000483031 PLA2G4EQ3MJ16 856 aa8.59□□□□□ -1.03
RPA3-207ENST00000483031 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
RPA3-207ENST00000483031 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
RPA3-207ENST00000483031 ERVK-9P63128 1117 aa8.58□□□□□ -1.04
RPA3-207ENST00000483031 POU4F2Q12837 409 aa8.58□□□□□ -1.04
RPA3-207ENST00000483031 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
RPA3-207ENST00000483031 CYP2U1Q7Z449 544 aa8.58□□□□□ -1.04
RPA3-207ENST00000483031 ACDQ96AP0 544 aa8.58□□□□□ -1.04
RPA3-207ENST00000483031 MX2P20592 715 aa8.57□□□□□ -1.04
RPA3-207ENST00000483031 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
RPA3-207ENST00000483031 NBPF10Q6P3W6 841 aaKnown RBP8.57□□□□□ -1.04
RPA3-207ENST00000483031 NBPF15Q8N660 670 aa8.57□□□□□ -1.04
RPA3-207ENST00000483031 LRRC4BQ9NT99 713 aa8.57□□□□□ -1.04
RPA3-207ENST00000483031 FBXO45P0C2W1 286 aa8.56□□□□□ -1.04
RPA3-207ENST00000483031 WDR44Q5JSH3 913 aa8.56□□□□□ -1.04
RPA3-207ENST00000483031 SPOCK3Q9BQ16 436 aa8.56□□□□□ -1.04
RPA3-207ENST00000483031 GRIP2Q9C0E4 1043 aa8.56□□□□□ -1.04
RPA3-207ENST00000483031 CLN3Q13286 438 aa8.55□□□□□ -1.04
RPA3-207ENST00000483031 NUCKS1Q9H1E3 243 aaKnown RBP8.55□□□□□ -1.04
RPA3-207ENST00000483031 ESF1Q9H501 851 aaKnown RBP8.55□□□□□ -1.04
RPA3-207ENST00000483031 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
RPA3-207ENST00000483031 SPATA31C2B4DYI2 1134 aa8.54□□□□□ -1.04
RPA3-207ENST00000483031 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
RPA3-207ENST00000483031 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
RPA3-207ENST00000483031 GALNT6Q8NCL4 622 aa8.54□□□□□ -1.04
RPA3-207ENST00000483031 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
RPA3-207ENST00000483031 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
RPA3-207ENST00000483031 ADAM23O75077 832 aa8.53□□□□□ -1.04
RPA3-207ENST00000483031 F11P03951 625 aa8.53□□□□□ -1.04
RPA3-207ENST00000483031 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
RPA3-207ENST00000483031 OIP5O43482 229 aa8.52□□□□□ -1.05
RPA3-207ENST00000483031 MAP2K3P46734 347 aa8.52□□□□□ -1.05
RPA3-207ENST00000483031 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
RPA3-207ENST00000483031 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
RPA3-207ENST00000483031 PCDHB11Q9Y5F2 797 aa8.52□□□□□ -1.05
RPA3-207ENST00000483031 PROCP04070 461 aa8.51□□□□□ -1.05
RPA3-207ENST00000483031 ITGB2P05107 769 aa8.51□□□□□ -1.05
RPA3-207ENST00000483031 SCTRP47872 440 aa8.51□□□□□ -1.05
RPA3-207ENST00000483031 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
RPA3-207ENST00000483031 OXCT2Q9BYC2 517 aaPredicted RBP8.51□□□□□ -1.05
RPA3-207ENST00000483031 ZNF330Q9Y3S2 320 aaPredicted RBP8.51□□□□□ -1.05
RPA3-207ENST00000483031 NR1H3Q13133 447 aa8.5□□□□□ -1.05
RPA3-207ENST00000483031 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
RPA3-207ENST00000483031 OSBPL3Q9H4L5 887 aa8.5□□□□□ -1.05
RPA3-207ENST00000483031 TRAK2O60296 914 aa8.49□□□□□ -1.05
RPA3-207ENST00000483031 PHF24Q9UPV7 400 aa8.49□□□□□ -1.05
RPA3-207ENST00000483031 GNRH1P01148 92 aa8.47□□□□□ -1.05
RPA3-207ENST00000483031 XP32Q5T750 250 aa8.47□□□□□ -1.05
RPA3-207ENST00000483031 GPAMQ9HCL2 828 aa8.47□□□□□ -1.05
RPA3-207ENST00000483031 RAB6BQ9NRW1 208 aa8.47□□□□□ -1.05
RPA3-207ENST00000483031 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
RPA3-207ENST00000483031 GTF2E1P29083 439 aaPredicted RBP8.46□□□□□ -1.06
RPA3-207ENST00000483031 SNRPNP63162 240 aaKnown RBP8.46□□□□□ -1.06
RPA3-207ENST00000483031 ALYREFQ86V81 257 aaKnown RBP8.46□□□□□ -1.06
RPA3-207ENST00000483031 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
RPA3-207ENST00000483031 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms