RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
SNX4-205ENST00000482965 SBF2Q86WG5 1849 aa11.88□□□□□ -0.51
SNX4-205ENST00000482965 MEGF6O75095 1541 aa11.87□□□□□ -0.51
SNX4-205ENST00000482965 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
SNX4-205ENST00000482965 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
SNX4-205ENST00000482965 EYA1Q99502 592 aa11.87□□□□□ -0.51
SNX4-205ENST00000482965 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
SNX4-205ENST00000482965 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
SNX4-205ENST00000482965 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
SNX4-205ENST00000482965 TRIM37O94972 964 aa11.85□□□□□ -0.51
SNX4-205ENST00000482965 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
SNX4-205ENST00000482965 DDX54Q8TDD1 881 aaKnown RBP11.85□□□□□ -0.51
SNX4-205ENST00000482965 BAG6P46379 1132 aa11.84□□□□□ -0.51
SNX4-205ENST00000482965 IGSF1Q8N6C5 1336 aa11.84□□□□□ -0.51
SNX4-205ENST00000482965 PKD1L3Q7Z443 1732 aa11.83□□□□□ -0.52
SNX4-205ENST00000482965 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
SNX4-205ENST00000482965 IL13P35225 146 aa11.83□□□□□ -0.52
SNX4-205ENST00000482965 DEFB132Q7Z7B7 95 aa11.83□□□□□ -0.52
SNX4-205ENST00000482965 BCL9O00512 1426 aa11.83□□□□□ -0.52
SNX4-205ENST00000482965 EP400Q96L91 3159 aa11.82□□□□□ -0.52
SNX4-205ENST00000482965 DIAPH1O60610 1272 aaKnown RBP11.82□□□□□ -0.52
SNX4-205ENST00000482965 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
SNX4-205ENST00000482965 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
SNX4-205ENST00000482965 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
SNX4-205ENST00000482965 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 APBA3O96018 575 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 COL3A1P02461 1466 aaPredicted RBP11.81□□□□□ -0.52
SNX4-205ENST00000482965 PCDH11XQ9BZA7 1347 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 PCDH11YQ9BZA8 1340 aa11.81□□□□□ -0.52
SNX4-205ENST00000482965 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
SNX4-205ENST00000482965 SULT6B1Q6IMI4 303 aa11.8□□□□□ -0.52
SNX4-205ENST00000482965 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
SNX4-205ENST00000482965 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
SNX4-205ENST00000482965 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
SNX4-205ENST00000482965 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
SNX4-205ENST00000482965 RALBP1Q15311 655 aa11.79□□□□□ -0.52
SNX4-205ENST00000482965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■■□□ 15.1
SNX4-205ENST00000482965 BTAF1O14981 1849 aa11.79□□□□□ -0.52
SNX4-205ENST00000482965 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
SNX4-205ENST00000482965 KCNQ2O43526 872 aa11.78□□□□□ -0.52
SNX4-205ENST00000482965 HMOX1P09601 288 aa11.78□□□□□ -0.52
SNX4-205ENST00000482965 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
SNX4-205ENST00000482965 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
SNX4-205ENST00000482965 KDRP35968 1356 aa11.78□□□□□ -0.52
SNX4-205ENST00000482965 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.52
SNX4-205ENST00000482965 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.52
SNX4-205ENST00000482965 CYP27B1O15528 508 aa11.77□□□□□ -0.53
SNX4-205ENST00000482965 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
SNX4-205ENST00000482965 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
SNX4-205ENST00000482965 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
SNX4-205ENST00000482965 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
SNX4-205ENST00000482965 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
SNX4-205ENST00000482965 CAMKK2Q96RR4 588 aa11.76□□□□□ -0.53
SNX4-205ENST00000482965 ITGB4P16144 1822 aa11.76□□□□□ -0.53
SNX4-205ENST00000482965 RREB1Q92766 1687 aa11.75□□□□□ -0.53
SNX4-205ENST00000482965 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
SNX4-205ENST00000482965 PHKG2P15735 406 aa11.75□□□□□ -0.53
SNX4-205ENST00000482965 PRIM1P49642 420 aaKnown RBP11.75□□□□□ -0.53
SNX4-205ENST00000482965 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
SNX4-205ENST00000482965 PLSCR1O15162 318 aa11.74□□□□□ -0.53
SNX4-205ENST00000482965 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
SNX4-205ENST00000482965 MYBBP1AQ9BQG0 1328 aaKnown RBP11.74□□□□□ -0.53
SNX4-205ENST00000482965 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
SNX4-205ENST00000482965 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
SNX4-205ENST00000482965 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
SNX4-205ENST00000482965 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNX4-205ENST00000482965 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
SNX4-205ENST00000482965 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
SNX4-205ENST00000482965 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
SNX4-205ENST00000482965 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
SNX4-205ENST00000482965 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
SNX4-205ENST00000482965 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
SNX4-205ENST00000482965 MPRIPQ6WCQ1 1025 aa11.71□□□□□ -0.53
SNX4-205ENST00000482965 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
SNX4-205ENST00000482965 TXNRD1Q16881 649 aa11.7□□□□□ -0.54
SNX4-205ENST00000482965 AKAP4Q5JQC9 854 aa11.7□□□□□ -0.54
SNX4-205ENST00000482965 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
SNX4-205ENST00000482965 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
SNX4-205ENST00000482965 TMOD3Q9NYL9 352 aa11.7□□□□□ -0.54
SNX4-205ENST00000482965 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
SNX4-205ENST00000482965 LY75O60449 1722 aa11.69□□□□□ -0.54
SNX4-205ENST00000482965 FCHSD2O94868 740 aa11.69□□□□□ -0.54
SNX4-205ENST00000482965 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
SNX4-205ENST00000482965 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
SNX4-205ENST00000482965 PROM2Q8N271 834 aa11.69□□□□□ -0.54
SNX4-205ENST00000482965 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
SNX4-205ENST00000482965 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
SNX4-205ENST00000482965 PIGBQ92521 554 aa11.68□□□□□ -0.54
SNX4-205ENST00000482965 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
SNX4-205ENST00000482965 ANP32CO43423 234 aa11.67□□□□□ -0.54
SNX4-205ENST00000482965 NEFMP07197 916 aa11.67□□□□□ -0.54
SNX4-205ENST00000482965 CABP4P57796 275 aa11.67□□□□□ -0.54
SNX4-205ENST00000482965 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
SNX4-205ENST00000482965 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
SNX4-205ENST00000482965 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
SNX4-205ENST00000482965 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
SNX4-205ENST00000482965 RNMTO43148 476 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms