RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
TSPAN1-208ENST00000482928 FCHSD2O94868 740 aa16.4■□□□□ 0.22
TSPAN1-208ENST00000482928 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
TSPAN1-208ENST00000482928 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
TSPAN1-208ENST00000482928 NFAT5O94916 1531 aa16.4■□□□□ 0.22
TSPAN1-208ENST00000482928 HOXC9P31274 260 aa16.39■□□□□ 0.21
TSPAN1-208ENST00000482928 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
TSPAN1-208ENST00000482928 ZBTB7AO95365 584 aa16.38■□□□□ 0.21
TSPAN1-208ENST00000482928 HMOX1P09601 288 aa16.38■□□□□ 0.21
TSPAN1-208ENST00000482928 APLP1P51693 650 aa16.38■□□□□ 0.21
TSPAN1-208ENST00000482928 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
TSPAN1-208ENST00000482928 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 PTGER2P43116 358 aa16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 TCP11L2Q8N4U5 519 aa16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 IP6K1Q92551 441 aa16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
TSPAN1-208ENST00000482928 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
TSPAN1-208ENST00000482928 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
TSPAN1-208ENST00000482928 GPBP1L1Q9HC44 474 aaPredicted RBP16.36■□□□□ 0.21
TSPAN1-208ENST00000482928 PHRF1Q9P1Y6 1649 aaKnown RBP16.36■□□□□ 0.21
TSPAN1-208ENST00000482928 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
TSPAN1-208ENST00000482928 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
TSPAN1-208ENST00000482928 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
TSPAN1-208ENST00000482928 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
TSPAN1-208ENST00000482928 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
TSPAN1-208ENST00000482928 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
TSPAN1-208ENST00000482928 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
TSPAN1-208ENST00000482928 CABLES1Q8TDN4 633 aa16.33■□□□□ 0.2
TSPAN1-208ENST00000482928 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
TSPAN1-208ENST00000482928 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
TSPAN1-208ENST00000482928 WDR90Q96KV7 1748 aa16.32■□□□□ 0.2
TSPAN1-208ENST00000482928 PLEKHF1Q96S99 279 aa16.32■□□□□ 0.2
TSPAN1-208ENST00000482928 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
TSPAN1-208ENST00000482928 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
TSPAN1-208ENST00000482928 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
TSPAN1-208ENST00000482928 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
TSPAN1-208ENST00000482928 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
TSPAN1-208ENST00000482928 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
TSPAN1-208ENST00000482928 PRDM11Q9NQV5 511 aa16.3■□□□□ 0.2
TSPAN1-208ENST00000482928 ABCA3Q99758 1704 aa16.3■□□□□ 0.2
TSPAN1-208ENST00000482928 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 CRYBG1Q9Y4K1 1723 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 NEFLP07196 543 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 RIPK4P57078 832 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 EYA1Q99502 592 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 ABCC6O95255 1503 aa16.29■□□□□ 0.2
TSPAN1-208ENST00000482928 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
TSPAN1-208ENST00000482928 CPDO75976 1380 aa16.27■□□□□ 0.2
TSPAN1-208ENST00000482928 E9PSI1 815 aa16.27■□□□□ 0.2
TSPAN1-208ENST00000482928 CALD1Q05682 793 aaKnown RBP16.27■□□□□ 0.2
TSPAN1-208ENST00000482928 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
TSPAN1-208ENST00000482928 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
TSPAN1-208ENST00000482928 ZNF526Q8TF50 670 aaPredicted RBP16.26■□□□□ 0.19
TSPAN1-208ENST00000482928 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
TSPAN1-208ENST00000482928 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
TSPAN1-208ENST00000482928 CDCA7LQ96GN5 454 aa16.25■□□□□ 0.19
TSPAN1-208ENST00000482928 MYH16Q9H6N6 1097 aa16.25■□□□□ 0.19
TSPAN1-208ENST00000482928 ANO8Q9HCE9 1232 aaPredicted RBP16.25■□□□□ 0.19
TSPAN1-208ENST00000482928 KDRP35968 1356 aa16.25■□□□□ 0.19
TSPAN1-208ENST00000482928 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
TSPAN1-208ENST00000482928 GAS2L2Q8NHY3 880 aa16.24■□□□□ 0.19
TSPAN1-208ENST00000482928 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
TSPAN1-208ENST00000482928 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
TSPAN1-208ENST00000482928 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
TSPAN1-208ENST00000482928 FAM208AQ9UK61 1670 aaKnown RBP16.23■□□□□ 0.19
TSPAN1-208ENST00000482928 ERBB3P21860 1342 aa16.22■□□□□ 0.19
TSPAN1-208ENST00000482928 SLFN5Q08AF3 891 aa16.22■□□□□ 0.19
TSPAN1-208ENST00000482928 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
TSPAN1-208ENST00000482928 JMYQ8N9B5 988 aa16.22■□□□□ 0.19
TSPAN1-208ENST00000482928 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
TSPAN1-208ENST00000482928 RGPD5Q99666 1765 aa16.22■□□□□ 0.19
TSPAN1-208ENST00000482928 EVA1CP58658 441 aa16.21■□□□□ 0.19
TSPAN1-208ENST00000482928 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
TSPAN1-208ENST00000482928 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
TSPAN1-208ENST00000482928 ARXQ96QS3 562 aa16.21■□□□□ 0.19
TSPAN1-208ENST00000482928 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
TSPAN1-208ENST00000482928 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
TSPAN1-208ENST00000482928 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
TSPAN1-208ENST00000482928 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
TSPAN1-208ENST00000482928 COL18A1P39060 1754 aa16.2■□□□□ 0.18
TSPAN1-208ENST00000482928 IL16Q14005 1332 aa16.19■□□□□ 0.18
TSPAN1-208ENST00000482928 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
TSPAN1-208ENST00000482928 SUPT16HQ9Y5B9 1047 aaKnown RBP16.19■□□□□ 0.18
TSPAN1-208ENST00000482928 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
TSPAN1-208ENST00000482928 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 DUSP27Q5VZP5 1158 aa16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 MTFR1LQ9H019 292 aa16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 STRN4Q9NRL3 753 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms