RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 C2orf72A6NCS6 295 aa6.2□□□□□ -1.42
SHQ1-208ENST00000482785 HSPA8P11142 646 aaKnown RBP6.2□□□□□ -1.42
SHQ1-208ENST00000482785 C16orf71Q8IYS4 520 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-208ENST00000482785 NEXMIFQ5QGS0 1516 aa6.2□□□□□ -1.42
SHQ1-208ENST00000482785 PIK3C2BO00750 1634 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 NUTM2FA1L443 756 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 KIF3BO15066 747 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 GNPATO15228 680 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 TRAK2O60296 914 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 TMEM92Q6UXU6 159 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 L3MBTL3Q96JM7 780 aaPredicted RBP6.19□□□□□ -1.42
SHQ1-208ENST00000482785 MKRN1Q9UHC7 482 aaKnown RBP6.19□□□□□ -1.42
SHQ1-208ENST00000482785 ADGRB3O60242 1522 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 EHBP1L1Q8N3D4 1523 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 ABCA3Q99758 1704 aa6.19□□□□□ -1.42
SHQ1-208ENST00000482785 TRIOBPQ9H2D6 2365 aa6.18□□□□□ -1.42
SHQ1-208ENST00000482785 CICQ96RK0 1608 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-208ENST00000482785 FOXK1P85037 733 aa6.18□□□□□ -1.42
SHQ1-208ENST00000482785 HIC1Q14526 733 aa6.18□□□□□ -1.42
SHQ1-208ENST00000482785 PLPP6Q8IY26 295 aa6.18□□□□□ -1.42
SHQ1-208ENST00000482785 SYCP2Q9BX26 1530 aa6.18□□□□□ -1.42
SHQ1-208ENST00000482785 ADGRL3Q9HAR2 1447 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 RGPD3A6NKT7 1758 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-208ENST00000482785 RGPD4Q7Z3J3 1758 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 SOX10P56693 466 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 SLC15A2Q16348 729 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 CCDC82Q8N4S0 544 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 PCMTD1Q96MG8 357 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-208ENST00000482785 ORAI2Q96SN7 254 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 RAPGEFL1Q9UHV5 662 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 PREX2Q70Z35 1606 aa6.17□□□□□ -1.42
SHQ1-208ENST00000482785 PRAG1Q86YV5 1406 aa6.16□□□□□ -1.42
SHQ1-208ENST00000482785 UNC80Q8N2C7 3258 aa6.16□□□□□ -1.42
SHQ1-208ENST00000482785 FCHSD2O94868 740 aa6.16□□□□□ -1.42
SHQ1-208ENST00000482785 TTLL12Q14166 644 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-208ENST00000482785 WBP1LQ9NX94 342 aa6.16□□□□□ -1.42
SHQ1-208ENST00000482785 STK32BQ9NY57 414 aa6.16□□□□□ -1.42
SHQ1-208ENST00000482785 NRAPQ86VF7 1730 aa6.16□□□□□ -1.42
SHQ1-208ENST00000482785 GRXCR2A6NFK2 248 aa6.15□□□□□ -1.42
SHQ1-208ENST00000482785 COL9A1P20849 921 aa6.15□□□□□ -1.42
SHQ1-208ENST00000482785 CLUAP1Q96AJ1 413 aa6.15□□□□□ -1.42
SHQ1-208ENST00000482785 COL25A1Q9BXS0 654 aaPredicted RBP6.15□□□□□ -1.42
SHQ1-208ENST00000482785 MCOLN1Q9GZU1 580 aa6.15□□□□□ -1.42
SHQ1-208ENST00000482785 VIRMAQ69YN4 1812 aaKnown RBP6.15□□□□□ -1.43
SHQ1-208ENST00000482785 NOS1P29475 1434 aa6.15□□□□□ -1.43
SHQ1-208ENST00000482785 C1orf167Q5SNV9 1468 aa6.15□□□□□ -1.43
SHQ1-208ENST00000482785 OSBPP22059 807 aa6.14□□□□□ -1.43
SHQ1-208ENST00000482785 PLA2G5P39877 138 aa6.14□□□□□ -1.43
SHQ1-208ENST00000482785 XPCQ01831 940 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-208ENST00000482785 SMC1BQ8NDV3 1235 aa6.14□□□□□ -1.43
SHQ1-208ENST00000482785 PRDM6Q9NQX0 595 aa6.14□□□□□ -1.43
SHQ1-208ENST00000482785 PTPN23Q9H3S7 1636 aa6.14□□□□□ -1.43
SHQ1-208ENST00000482785 COL24A1Q17RW2 1714 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 CASP8AP2Q9UKL3 1982 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 MAP3K9P80192 1104 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 MCM6Q14566 821 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 GIGYF2Q6Y7W6 1299 aaKnown RBP6.13□□□□□ -1.43
SHQ1-208ENST00000482785 C3orf67Q6ZVT6 689 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.13□□□□□ -1.43
SHQ1-208ENST00000482785 DHX29Q7Z478 1369 aaKnown RBP6.13□□□□□ -1.43
SHQ1-208ENST00000482785 TRPM2O94759 1503 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 NALCNQ8IZF0 1738 aa6.13□□□□□ -1.43
SHQ1-208ENST00000482785 PLSCR1O15162 318 aa6.12□□□□□ -1.43
SHQ1-208ENST00000482785 RPRD2Q5VT52 1461 aaKnown RBP6.12□□□□□ -1.43
SHQ1-208ENST00000482785 SLAIN1Q8ND83 568 aa6.12□□□□□ -1.43
SHQ1-208ENST00000482785 NECTIN2Q92692 538 aa6.12□□□□□ -1.43
SHQ1-208ENST00000482785 ZNF777Q9ULD5 760 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-208ENST00000482785 PXDNQ92626 1479 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 SPATA31A5Q5VU36 1347 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 SPATA31A7Q8IWB4 1347 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 MS4A1P11836 297 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 FECHP22830 423 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 SH3D19Q5HYK7 790 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 PTF1AQ7RTS3 328 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 COL26A1Q96A83 441 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 SERPINA10Q9UK55 444 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 TBX22Q9Y458 520 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 SBF2Q86WG5 1849 aa6.11□□□□□ -1.43
SHQ1-208ENST00000482785 PTPRUQ92729 1446 aa6.1□□□□□ -1.43
SHQ1-208ENST00000482785 POLD1P28340 1107 aa6.1□□□□□ -1.43
SHQ1-208ENST00000482785 KCTD17Q8N5Z5 321 aa6.1□□□□□ -1.43
SHQ1-208ENST00000482785 TRAIPQ9BWF2 469 aa6.1□□□□□ -1.43
SHQ1-208ENST00000482785 AMOTL2Q9Y2J4 779 aa6.1□□□□□ -1.43
SHQ1-208ENST00000482785 CDC42BPAQ5VT25 1732 aa6.1□□□□□ -1.43
SHQ1-208ENST00000482785 BAHCC1Q9P281 2608 aa6.09□□□□□ -1.43
SHQ1-208ENST00000482785 PTGDRQ13258 359 aa6.09□□□□□ -1.43
SHQ1-208ENST00000482785 CABLES1Q8TDN4 633 aa6.09□□□□□ -1.43
SHQ1-208ENST00000482785 FAM122AQ96E09 287 aa6.09□□□□□ -1.43
SHQ1-208ENST00000482785 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
SHQ1-208ENST00000482785 TOPAZ1Q8N9V7 1692 aa6.09□□□□□ -1.43
SHQ1-208ENST00000482785 VCANP13611 3396 aa6.09□□□□□ -1.44
SHQ1-208ENST00000482785 CEP152O94986 1710 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 CNTNAP1P78357 1384 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 PLEKHG1Q9ULL1 1385 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 RAD21O60216 631 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 CLCN1P35523 988 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 VEGFBP49765 207 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 SKIV2LQ15477 1246 aaKnown RBP6.08□□□□□ -1.44
SHQ1-208ENST00000482785 NBPF15Q8N660 670 aa6.08□□□□□ -1.44
SHQ1-208ENST00000482785 PMFBP1Q8TBY8 1022 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms