RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 MEGF6O75095 1541 aa13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 TNNT2P45379 298 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 R3HDM1Q15032 1099 aaKnown RBP13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 ACSBG1Q96GR2 724 aa13.73□□□□□ -0.21
HLA-DQA1-206ENST00000482745 DDX54Q8TDD1 881 aaKnown RBP13.72□□□□□ -0.21
HLA-DQA1-206ENST00000482745 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
HLA-DQA1-206ENST00000482745 KCNQ2O43526 872 aa13.71□□□□□ -0.21
HLA-DQA1-206ENST00000482745 NSD2O96028 1365 aa13.7□□□□□ -0.22
HLA-DQA1-206ENST00000482745 BTAF1O14981 1849 aa13.7□□□□□ -0.22
HLA-DQA1-206ENST00000482745 PLSCR1O15162 318 aa13.7□□□□□ -0.22
HLA-DQA1-206ENST00000482745 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
HLA-DQA1-206ENST00000482745 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
HLA-DQA1-206ENST00000482745 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
HLA-DQA1-206ENST00000482745 KNSTRNQ9Y448 316 aa13.69□□□□□ -0.22
HLA-DQA1-206ENST00000482745 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
HLA-DQA1-206ENST00000482745 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
HLA-DQA1-206ENST00000482745 WASHC2AQ641Q2 1341 aa13.68□□□□□ -0.22
HLA-DQA1-206ENST00000482745 LRP5O75197 1615 aa13.68□□□□□ -0.22
HLA-DQA1-206ENST00000482745 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQA1-206ENST00000482745 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
HLA-DQA1-206ENST00000482745 TXNRD1Q16881 649 aa13.66□□□□□ -0.22
HLA-DQA1-206ENST00000482745 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQA1-206ENST00000482745 PROM2Q8N271 834 aa13.65□□□□□ -0.22
HLA-DQA1-206ENST00000482745 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
HLA-DQA1-206ENST00000482745 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQA1-206ENST00000482745 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
HLA-DQA1-206ENST00000482745 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
HLA-DQA1-206ENST00000482745 EYA1Q99502 592 aa13.64□□□□□ -0.23
HLA-DQA1-206ENST00000482745 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
HLA-DQA1-206ENST00000482745 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
HLA-DQA1-206ENST00000482745 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
HLA-DQA1-206ENST00000482745 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-206ENST00000482745 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQA1-206ENST00000482745 CC2D1BQ5T0F9 858 aaKnown RBP13.61□□□□□ -0.23
HLA-DQA1-206ENST00000482745 CYP27B1O15528 508 aa13.6□□□□□ -0.23
HLA-DQA1-206ENST00000482745 STK32BQ9NY57 414 aa13.6□□□□□ -0.23
HLA-DQA1-206ENST00000482745 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
HLA-DQA1-206ENST00000482745 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
HLA-DQA1-206ENST00000482745 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQA1-206ENST00000482745 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
HLA-DQA1-206ENST00000482745 CASZ1Q86V15 1759 aa13.59□□□□□ -0.23
HLA-DQA1-206ENST00000482745 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
HLA-DQA1-206ENST00000482745 LY75O60449 1722 aa13.59□□□□□ -0.23
HLA-DQA1-206ENST00000482745 ITGB4P16144 1822 aa13.58□□□□□ -0.24
HLA-DQA1-206ENST00000482745 SLC15A2Q16348 729 aa13.58□□□□□ -0.24
HLA-DQA1-206ENST00000482745 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
HLA-DQA1-206ENST00000482745 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQA1-206ENST00000482745 KCNQ4P56696 695 aa13.56□□□□□ -0.24
HLA-DQA1-206ENST00000482745 MPRIPQ6WCQ1 1025 aa13.56□□□□□ -0.24
HLA-DQA1-206ENST00000482745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DQA1-206ENST00000482745 MTHFSP49914 203 aa13.55□□□□□ -0.24
HLA-DQA1-206ENST00000482745 SLC27A3Q5K4L6 730 aa13.55□□□□□ -0.24
HLA-DQA1-206ENST00000482745 SPON1Q9HCB6 807 aa13.55□□□□□ -0.24
HLA-DQA1-206ENST00000482745 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
HLA-DQA1-206ENST00000482745 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
HLA-DQA1-206ENST00000482745 ZBTB7AO95365 584 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 PHKG2P15735 406 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 IL13P35225 146 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
HLA-DQA1-206ENST00000482745 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
HLA-DQA1-206ENST00000482745 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQA1-206ENST00000482745 PPP1R1BQ9UD71 204 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQA1-206ENST00000482745 PALLDQ8WX93 1383 aa13.53□□□□□ -0.24
HLA-DQA1-206ENST00000482745 C5P01031 1676 aa13.52□□□□□ -0.24
HLA-DQA1-206ENST00000482745 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA1-206ENST00000482745 QSER1Q2KHR3 1735 aa13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 PIGBQ92521 554 aa13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 KDRP35968 1356 aa13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQA1-206ENST00000482745 TAF1LQ8IZX4 1826 aa13.5□□□□□ -0.25
HLA-DQA1-206ENST00000482745 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
HLA-DQA1-206ENST00000482745 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
HLA-DQA1-206ENST00000482745 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA1-206ENST00000482745 HMOX1P09601 288 aa13.49□□□□□ -0.25
HLA-DQA1-206ENST00000482745 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA1-206ENST00000482745 C1orf141Q5JVX7 400 aa13.49□□□□□ -0.25
HLA-DQA1-206ENST00000482745 MTFR1LQ9H019 292 aa13.49□□□□□ -0.25
HLA-DQA1-206ENST00000482745 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQA1-206ENST00000482745 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
HLA-DQA1-206ENST00000482745 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQA1-206ENST00000482745 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
HLA-DQA1-206ENST00000482745 PNPLA7Q6ZV29 1317 aa13.48□□□□□ -0.25
HLA-DQA1-206ENST00000482745 PTGER2P43116 358 aa13.47□□□□□ -0.25
HLA-DQA1-206ENST00000482745 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
HLA-DQA1-206ENST00000482745 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
HLA-DQA1-206ENST00000482745 ERVV-2B6SEH9 535 aa13.46□□□□□ -0.26
HLA-DQA1-206ENST00000482745 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.26
HLA-DQA1-206ENST00000482745 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.26
HLA-DQA1-206ENST00000482745 MSH5O43196 834 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms