RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 STK32BQ9NY57 414 aa27.26■■□□□ 1.95
MSH5-215ENST00000482280 NSD2O96028 1365 aa27.25■■□□□ 1.95
MSH5-215ENST00000482280 MEGF6O75095 1541 aa27.25■■□□□ 1.95
MSH5-215ENST00000482280 WASHC2AQ641Q2 1341 aa27.24■■□□□ 1.95
MSH5-215ENST00000482280 MORC1Q86VD1 984 aa27.22■■□□□ 1.95
MSH5-215ENST00000482280 RGPD2P0DJD1 1756 aa27.22■■□□□ 1.95
MSH5-215ENST00000482280 PCDH11XQ9BZA7 1347 aa27.21■■□□□ 1.95
MSH5-215ENST00000482280 PCDH11YQ9BZA8 1340 aa27.21■■□□□ 1.95
MSH5-215ENST00000482280 PROM2Q8N271 834 aa27.21■■□□□ 1.95
MSH5-215ENST00000482280 POLKQ9UBT6 870 aa27.21■■□□□ 1.95
MSH5-215ENST00000482280 PRIM1P49642 420 aaKnown RBP27.19■■□□□ 1.94
MSH5-215ENST00000482280 SPON1Q9HCB6 807 aa27.19■■□□□ 1.94
MSH5-215ENST00000482280 ANO8Q9HCE9 1232 aaPredicted RBP27.18■■□□□ 1.94
MSH5-215ENST00000482280 PPP1R1BQ9UD71 204 aaPredicted RBP27.18■■□□□ 1.94
MSH5-215ENST00000482280 KIF7Q2M1P5 1343 aa27.17■■□□□ 1.94
MSH5-215ENST00000482280 ANKRD26Q9UPS8 1709 aa27.17■■□□□ 1.94
MSH5-215ENST00000482280 SPG7Q9UQ90 795 aa27.16■■□□□ 1.94
MSH5-215ENST00000482280 KAT6BQ8WYB5 2073 aa27.15■■□□□ 1.94
MSH5-215ENST00000482280 SRCAPQ6ZRS2 3230 aa27.15■■□□□ 1.94
MSH5-215ENST00000482280 SLC15A2Q16348 729 aa27.15■■□□□ 1.94
MSH5-215ENST00000482280 BTAF1O14981 1849 aa27.14■■□□□ 1.94
MSH5-215ENST00000482280 SLC27A3Q5K4L6 730 aa27.14■■□□□ 1.94
MSH5-215ENST00000482280 MAP2P11137 1827 aaKnown RBP27.13■■□□□ 1.93
MSH5-215ENST00000482280 EYA1Q99502 592 aa27.13■■□□□ 1.93
MSH5-215ENST00000482280 EIF4A2Q14240 407 aaKnown RBP27.11■■□□□ 1.93
MSH5-215ENST00000482280 DOT1LQ8TEK3 1739 aa27.1■■□□□ 1.93
MSH5-215ENST00000482280 HMGB2P26583 209 aaKnown RBP27.09■■□□□ 1.93
MSH5-215ENST00000482280 SHANK3Q9BYB0 1731 aa27.07■■□□□ 1.92
MSH5-215ENST00000482280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.07■■□□□ 1.922e-7■■■□□ 14.8
MSH5-215ENST00000482280 ZBTB7AO95365 584 aa27.06■■□□□ 1.92
MSH5-215ENST00000482280 NCAPD2Q15021 1401 aa27.06■■□□□ 1.92
MSH5-215ENST00000482280 CYP27B1O15528 508 aa27.05■■□□□ 1.92
MSH5-215ENST00000482280 MPRIPQ6WCQ1 1025 aa27.05■■□□□ 1.92
MSH5-215ENST00000482280 CCNL1Q9UK58 526 aaPredicted RBP27.05■■□□□ 1.92
MSH5-215ENST00000482280 LRRC4BQ9NT99 713 aa27.04■■□□□ 1.92
MSH5-215ENST00000482280 DCAF8L1A6NGE4 600 aa27.02■■□□□ 1.92
MSH5-215ENST00000482280 AMER1Q5JTC6 1135 aaPredicted RBP27.02■■□□□ 1.92
MSH5-215ENST00000482280 IFNL2Q8IZJ0 200 aa27.02■■□□□ 1.92
MSH5-215ENST00000482280 TFCP2L1Q9NZI6 479 aa27.02■■□□□ 1.92
MSH5-215ENST00000482280 IGSF1Q8N6C5 1336 aa27.01■■□□□ 1.91
MSH5-215ENST00000482280 MTFR1LQ9H019 292 aa27.01■■□□□ 1.91
MSH5-215ENST00000482280 ATF5Q9Y2D1 282 aaPredicted RBP27.01■■□□□ 1.91
MSH5-215ENST00000482280 PLEKHG2Q9H7P9 1386 aa27■■□□□ 1.91
MSH5-215ENST00000482280 CC2D1BQ5T0F9 858 aaKnown RBP27■■□□□ 1.91
MSH5-215ENST00000482280 SMARCC1Q92922 1105 aaPredicted RBP27■■□□□ 1.91
MSH5-215ENST00000482280 PDGFDQ9GZP0 370 aaPredicted RBP27■■□□□ 1.91
MSH5-215ENST00000482280 PKD1L3Q7Z443 1732 aa26.99■■□□□ 1.91
MSH5-215ENST00000482280 ZNF827Q17R98 1081 aa26.99■■□□□ 1.91
MSH5-215ENST00000482280 PLEKHO1Q53GL0 409 aaPredicted RBP26.99■■□□□ 1.91
MSH5-215ENST00000482280 KCNQ4P56696 695 aa26.98■■□□□ 1.91
MSH5-215ENST00000482280 NKX1-1Q15270 411 aaPredicted RBP26.98■■□□□ 1.91
MSH5-215ENST00000482280 TMOD3Q9NYL9 352 aa26.98■■□□□ 1.91
MSH5-215ENST00000482280 CASZ1Q86V15 1759 aa26.98■■□□□ 1.91
MSH5-215ENST00000482280 PAPPAQ13219 1627 aa26.97■■□□□ 1.91
MSH5-215ENST00000482280 PALLDQ8WX93 1383 aa26.97■■□□□ 1.91
MSH5-215ENST00000482280 HSP90AB1P08238 724 aaKnown RBP26.96■■□□□ 1.91
MSH5-215ENST00000482280 PHKG2P15735 406 aa26.96■■□□□ 1.91
MSH5-215ENST00000482280 CNGB1Q14028 1251 aaPredicted RBP26.96■■□□□ 1.91
MSH5-215ENST00000482280 AMOTQ4VCS5 1084 aa26.96■■□□□ 1.91
MSH5-215ENST00000482280 AKT1S1Q96B36 256 aa26.96■■□□□ 1.91
MSH5-215ENST00000482280 MTHFSP49914 203 aa26.94■■□□□ 1.9
MSH5-215ENST00000482280 PER1O15534 1290 aaPredicted RBP26.93■■□□□ 1.9
MSH5-215ENST00000482280 MSH5O43196 834 aa26.93■■□□□ 1.9
MSH5-215ENST00000482280 C1orf141Q5JVX7 400 aa26.93■■□□□ 1.9
MSH5-215ENST00000482280 SLC16A10Q8TF71 515 aa26.93■■□□□ 1.9
MSH5-215ENST00000482280 SULT6B1Q6IMI4 303 aa26.92■■□□□ 1.9
MSH5-215ENST00000482280 ZNF530Q6P9A1 599 aaPredicted RBP26.92■■□□□ 1.9
MSH5-215ENST00000482280 LY75O60449 1722 aa26.92■■□□□ 1.9
MSH5-215ENST00000482280 PIGBQ92521 554 aa26.91■■□□□ 1.9
MSH5-215ENST00000482280 POLD1P28340 1107 aa26.9■■□□□ 1.9
MSH5-215ENST00000482280 IL13P35225 146 aa26.89■■□□□ 1.9
MSH5-215ENST00000482280 PTGER2P43116 358 aa26.89■■□□□ 1.9
MSH5-215ENST00000482280 DCAF5Q96JK2 942 aa26.89■■□□□ 1.9
MSH5-215ENST00000482280 NPC1L1Q9UHC9 1359 aa26.88■■□□□ 1.89
MSH5-215ENST00000482280 AEBP1Q8IUX7 1158 aa26.88■■□□□ 1.89
MSH5-215ENST00000482280 PNPLA7Q6ZV29 1317 aa26.88■■□□□ 1.89
MSH5-215ENST00000482280 DIAPH1O60610 1272 aaKnown RBP26.87■■□□□ 1.89
MSH5-215ENST00000482280 ERVV-2B6SEH9 535 aa26.86■■□□□ 1.89
MSH5-215ENST00000482280 FLAD1Q8NFF5 587 aa26.86■■□□□ 1.89
MSH5-215ENST00000482280 AK7Q96M32 723 aa26.86■■□□□ 1.89
MSH5-215ENST00000482280 ARXQ96QS3 562 aa26.86■■□□□ 1.89
MSH5-215ENST00000482280 TOGARAM1Q9Y4F4 1720 aa26.86■■□□□ 1.89
MSH5-215ENST00000482280 CABP4P57796 275 aa26.84■■□□□ 1.89
MSH5-215ENST00000482280 ITGB4P16144 1822 aa26.83■■□□□ 1.89
MSH5-215ENST00000482280 LOC102724428A0A0B4J2F2 783 aa26.83■■□□□ 1.89
MSH5-215ENST00000482280 SIK1P57059 783 aa26.83■■□□□ 1.89
MSH5-215ENST00000482280 FHDC1Q9C0D6 1143 aaPredicted RBP26.82■■□□□ 1.88
MSH5-215ENST00000482280 ASAP1Q9ULH1 1129 aa26.82■■□□□ 1.88
MSH5-215ENST00000482280 KDRP35968 1356 aa26.82■■□□□ 1.88
MSH5-215ENST00000482280 CFAP53Q96M91 514 aa26.81■■□□□ 1.88
MSH5-215ENST00000482280 QSER1Q2KHR3 1735 aa26.81■■□□□ 1.88
MSH5-215ENST00000482280 C5P01031 1676 aa26.8■■□□□ 1.88
MSH5-215ENST00000482280 HMOX1P09601 288 aa26.8■■□□□ 1.88
MSH5-215ENST00000482280 ATP6V1AP38606 617 aa26.8■■□□□ 1.88
MSH5-215ENST00000482280 KLHL34Q8N239 644 aa26.8■■□□□ 1.88
MSH5-215ENST00000482280 SGIP1Q9BQI5 828 aa26.79■■□□□ 1.88
MSH5-215ENST00000482280 U2SURPO15042 1029 aaKnown RBP26.78■■□□□ 1.88
MSH5-215ENST00000482280 COL23A1Q86Y22 540 aaPredicted RBP26.78■■□□□ 1.88
MSH5-215ENST00000482280 ATG3Q9NT62 314 aa26.78■■□□□ 1.88
MSH5-215ENST00000482280 SYT17Q9BSW7 474 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms