RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 DOT1LQ8TEK3 1739 aa14.63□□□□□ -0.07
DDX39B-220ENST00000482195 CD163L1Q9NR16 1453 aa14.63□□□□□ -0.07
DDX39B-220ENST00000482195 USP31Q70CQ4 1352 aa14.63□□□□□ -0.07
DDX39B-220ENST00000482195 MTFR1LQ9H019 292 aa14.63□□□□□ -0.07
DDX39B-220ENST00000482195 TUBGCP6Q96RT7 1819 aa14.63□□□□□ -0.07
DDX39B-220ENST00000482195 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
DDX39B-220ENST00000482195 SBNO2Q9Y2G9 1366 aa14.62□□□□□ -0.07
DDX39B-220ENST00000482195 RGPD2P0DJD1 1756 aa14.62□□□□□ -0.07
DDX39B-220ENST00000482195 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
DDX39B-220ENST00000482195 LTV1Q96GA3 475 aaPredicted RBP14.61□□□□□ -0.07
DDX39B-220ENST00000482195 QSER1Q2KHR3 1735 aa14.61□□□□□ -0.07
DDX39B-220ENST00000482195 A0A1W2PP64 1363 aa14.6□□□□□ -0.07
DDX39B-220ENST00000482195 SYT17Q9BSW7 474 aa14.6□□□□□ -0.07
DDX39B-220ENST00000482195 ZNF827Q17R98 1081 aa14.59□□□□□ -0.07
DDX39B-220ENST00000482195 SLC12A5Q9H2X9 1139 aa14.59□□□□□ -0.07
DDX39B-220ENST00000482195 TERF2IPQ9NYB0 399 aa14.59□□□□□ -0.07
DDX39B-220ENST00000482195 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
DDX39B-220ENST00000482195 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
DDX39B-220ENST00000482195 SYTL4Q96C24 671 aaPredicted RBP14.58□□□□□ -0.08
DDX39B-220ENST00000482195 ARXQ96QS3 562 aa14.58□□□□□ -0.08
DDX39B-220ENST00000482195 SHANK3Q9BYB0 1731 aa14.58□□□□□ -0.08
DDX39B-220ENST00000482195 ZNF784Q8NCA9 323 aaPredicted RBP14.57□□□□□ -0.08
DDX39B-220ENST00000482195 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
DDX39B-220ENST00000482195 LY75O60449 1722 aa14.55□□□□□ -0.08
DDX39B-220ENST00000482195 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
DDX39B-220ENST00000482195 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
DDX39B-220ENST00000482195 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
DDX39B-220ENST00000482195 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
DDX39B-220ENST00000482195 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
DDX39B-220ENST00000482195 POLD1P28340 1107 aa14.54□□□□□ -0.08
DDX39B-220ENST00000482195 GPR162Q16538 588 aa14.54□□□□□ -0.08
DDX39B-220ENST00000482195 IP6K1Q92551 441 aa14.54□□□□□ -0.08
DDX39B-220ENST00000482195 COG3Q96JB2 828 aa14.54□□□□□ -0.08
DDX39B-220ENST00000482195 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
DDX39B-220ENST00000482195 KIF20BQ96Q89 1820 aa14.53□□□□□ -0.08
DDX39B-220ENST00000482195 AMPHP49418 695 aa14.53□□□□□ -0.08
DDX39B-220ENST00000482195 TFCP2L1Q9NZI6 479 aa14.53□□□□□ -0.08
DDX39B-220ENST00000482195 MAP3K5Q99683 1374 aa14.52□□□□□ -0.08
DDX39B-220ENST00000482195 KCNQ4P56696 695 aa14.52□□□□□ -0.09
DDX39B-220ENST00000482195 SLC27A3Q5K4L6 730 aa14.52□□□□□ -0.09
DDX39B-220ENST00000482195 COL24A1Q17RW2 1714 aa14.52□□□□□ -0.09
DDX39B-220ENST00000482195 MEGF6O75095 1541 aa14.51□□□□□ -0.09
DDX39B-220ENST00000482195 MAP3K19Q56UN5 1328 aa14.51□□□□□ -0.09
DDX39B-220ENST00000482195 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
DDX39B-220ENST00000482195 ANKRD36BQ8N2N9 1353 aa14.5□□□□□ -0.09
DDX39B-220ENST00000482195 PNPLA7Q6ZV29 1317 aa14.5□□□□□ -0.09
DDX39B-220ENST00000482195 C5P01031 1676 aa14.5□□□□□ -0.09
DDX39B-220ENST00000482195 SENP3-EIF4A1A0A087X0R7 540 aa14.5□□□□□ -0.09
DDX39B-220ENST00000482195 HOXC9P31274 260 aa14.5□□□□□ -0.09
DDX39B-220ENST00000482195 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
DDX39B-220ENST00000482195 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
DDX39B-220ENST00000482195 FBLN1P23142 703 aa14.49□□□□□ -0.09
DDX39B-220ENST00000482195 GOLGB1Q14789 3259 aaKnown RBP14.49□□□□□ -0.09
DDX39B-220ENST00000482195 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
DDX39B-220ENST00000482195 USHBP1Q8N6Y0 703 aa14.48□□□□□ -0.09
DDX39B-220ENST00000482195 ZCRB1Q8TBF4 217 aaKnown RBP14.48□□□□□ -0.09
DDX39B-220ENST00000482195 SLC16A10Q8TF71 515 aa14.48□□□□□ -0.09
DDX39B-220ENST00000482195 CCNL1Q9UK58 526 aaPredicted RBP14.48□□□□□ -0.09
DDX39B-220ENST00000482195 NSD2O96028 1365 aa14.47□□□□□ -0.09
DDX39B-220ENST00000482195 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
DDX39B-220ENST00000482195 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
DDX39B-220ENST00000482195 RRS1Q15050 365 aaKnown RBP14.47□□□□□ -0.09
DDX39B-220ENST00000482195 PUS7Q96PZ0 661 aaKnown RBP14.47□□□□□ -0.09
DDX39B-220ENST00000482195 TAF1LQ8IZX4 1826 aa14.47□□□□□ -0.09
DDX39B-220ENST00000482195 USP47Q96K76 1375 aa14.47□□□□□ -0.09
DDX39B-220ENST00000482195 MSL1Q68DK7 614 aa14.45□□□□□ -0.1
DDX39B-220ENST00000482195 NLGN2Q8NFZ4 835 aa14.45□□□□□ -0.1
DDX39B-220ENST00000482195 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
DDX39B-220ENST00000482195 TESK2Q96S53 571 aa14.45□□□□□ -0.1
DDX39B-220ENST00000482195 ITGB4P16144 1822 aa14.45□□□□□ -0.1
DDX39B-220ENST00000482195 GIGYF1O75420 1035 aaPredicted RBP14.44□□□□□ -0.1
DDX39B-220ENST00000482195 C1QTNF8P60827 252 aa14.44□□□□□ -0.1
DDX39B-220ENST00000482195 GGNBP2Q9H3C7 697 aa14.44□□□□□ -0.1
DDX39B-220ENST00000482195 TOGARAM1Q9Y4F4 1720 aa14.44□□□□□ -0.1
DDX39B-220ENST00000482195 TATP17735 454 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-220ENST00000482195 SPOCK2Q92563 424 aa14.43□□□□□ -0.1
DDX39B-220ENST00000482195 NBPF6Q5VWK0 638 aa14.42□□□□□ -0.1
DDX39B-220ENST00000482195 NBPF4Q96M43 638 aa14.42□□□□□ -0.1
DDX39B-220ENST00000482195 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
DDX39B-220ENST00000482195 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
DDX39B-220ENST00000482195 TMF1P82094 1093 aa14.41□□□□□ -0.1
DDX39B-220ENST00000482195 COL23A1Q86Y22 540 aaPredicted RBP14.41□□□□□ -0.1
DDX39B-220ENST00000482195 C4BP0C0L5 1744 aa14.41□□□□□ -0.1
DDX39B-220ENST00000482195 PKD1L3Q7Z443 1732 aa14.41□□□□□ -0.1
DDX39B-220ENST00000482195 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
DDX39B-220ENST00000482195 FLT4P35916 1363 aa14.4□□□□□ -0.1
DDX39B-220ENST00000482195 PALLDQ8WX93 1383 aa14.4□□□□□ -0.1
DDX39B-220ENST00000482195 FYB1O15117 783 aa14.39□□□□□ -0.11
DDX39B-220ENST00000482195 MPRIPQ6WCQ1 1025 aa14.39□□□□□ -0.11
DDX39B-220ENST00000482195 UBR3Q6ZT12 1888 aa14.39□□□□□ -0.11
DDX39B-220ENST00000482195 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.111e-8■□□□□ 8.9
DDX39B-220ENST00000482195 HSP90AB2PQ58FF8 381 aa14.38□□□□□ -0.11
DDX39B-220ENST00000482195 INSRP06213 1382 aa14.37□□□□□ -0.11
DDX39B-220ENST00000482195 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
DDX39B-220ENST00000482195 GRIN3BO60391 1043 aa14.37□□□□□ -0.11
DDX39B-220ENST00000482195 AK7Q96M32 723 aa14.37□□□□□ -0.11
DDX39B-220ENST00000482195 ANKRD26Q9UPS8 1709 aa14.36□□□□□ -0.11
DDX39B-220ENST00000482195 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
DDX39B-220ENST00000482195 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
DDX39B-220ENST00000482195 PHF14O94880 888 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms