RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 KCNQ2O43526 872 aa16.25■□□□□ 0.19
HMGN1-213ENST00000482192 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-213ENST00000482192 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
HMGN1-213ENST00000482192 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
HMGN1-213ENST00000482192 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
HMGN1-213ENST00000482192 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
HMGN1-213ENST00000482192 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-213ENST00000482192 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
HMGN1-213ENST00000482192 SHANK3Q9BYB0 1731 aa16.23■□□□□ 0.19
HMGN1-213ENST00000482192 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
HMGN1-213ENST00000482192 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
HMGN1-213ENST00000482192 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-213ENST00000482192 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
HMGN1-213ENST00000482192 EYA1Q99502 592 aa16.21■□□□□ 0.19
HMGN1-213ENST00000482192 LRP5O75197 1615 aa16.2■□□□□ 0.18
HMGN1-213ENST00000482192 TXNRD1Q16881 649 aa16.2■□□□□ 0.18
HMGN1-213ENST00000482192 PROM2Q8N271 834 aa16.2■□□□□ 0.18
HMGN1-213ENST00000482192 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
HMGN1-213ENST00000482192 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-213ENST00000482192 BTAF1O14981 1849 aa16.19■□□□□ 0.18
HMGN1-213ENST00000482192 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
HMGN1-213ENST00000482192 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
HMGN1-213ENST00000482192 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
HMGN1-213ENST00000482192 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
HMGN1-213ENST00000482192 NPC1L1Q9UHC9 1359 aa16.17■□□□□ 0.18
HMGN1-213ENST00000482192 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
HMGN1-213ENST00000482192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.17■□□□□ 0.188e-8■■□□□ 13
HMGN1-213ENST00000482192 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
HMGN1-213ENST00000482192 CYP27B1O15528 508 aa16.15■□□□□ 0.18
HMGN1-213ENST00000482192 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
HMGN1-213ENST00000482192 STK32BQ9NY57 414 aa16.14■□□□□ 0.17
HMGN1-213ENST00000482192 MTHFSP49914 203 aa16.13■□□□□ 0.17
HMGN1-213ENST00000482192 SLC27A3Q5K4L6 730 aa16.13■□□□□ 0.17
HMGN1-213ENST00000482192 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
HMGN1-213ENST00000482192 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-213ENST00000482192 IL13P35225 146 aa16.11■□□□□ 0.17
HMGN1-213ENST00000482192 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
HMGN1-213ENST00000482192 IFNL2Q8IZJ0 200 aa16.11■□□□□ 0.17
HMGN1-213ENST00000482192 PHKG2P15735 406 aa16.1■□□□□ 0.17
HMGN1-213ENST00000482192 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
HMGN1-213ENST00000482192 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
HMGN1-213ENST00000482192 KDRP35968 1356 aa16.1■□□□□ 0.17
HMGN1-213ENST00000482192 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-213ENST00000482192 AMOTQ4VCS5 1084 aa16.09■□□□□ 0.17
HMGN1-213ENST00000482192 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
HMGN1-213ENST00000482192 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
HMGN1-213ENST00000482192 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
HMGN1-213ENST00000482192 LY75O60449 1722 aa16.08■□□□□ 0.17
HMGN1-213ENST00000482192 CASZ1Q86V15 1759 aa16.08■□□□□ 0.17
HMGN1-213ENST00000482192 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-213ENST00000482192 SPON1Q9HCB6 807 aa16.08■□□□□ 0.16
HMGN1-213ENST00000482192 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-213ENST00000482192 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
HMGN1-213ENST00000482192 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
HMGN1-213ENST00000482192 ZNF827Q17R98 1081 aa16.06■□□□□ 0.16
HMGN1-213ENST00000482192 HSP90AB1P08238 724 aaKnown RBP16.05■□□□□ 0.16
HMGN1-213ENST00000482192 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
HMGN1-213ENST00000482192 PIGBQ92521 554 aa16.05■□□□□ 0.16
HMGN1-213ENST00000482192 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-213ENST00000482192 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
HMGN1-213ENST00000482192 PDGFDQ9GZP0 370 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-213ENST00000482192 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
HMGN1-213ENST00000482192 KAT6BQ8WYB5 2073 aa16.04■□□□□ 0.16
HMGN1-213ENST00000482192 KCNQ4P56696 695 aa16.04■□□□□ 0.16
HMGN1-213ENST00000482192 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-213ENST00000482192 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
HMGN1-213ENST00000482192 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
HMGN1-213ENST00000482192 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-213ENST00000482192 ITGB4P16144 1822 aa16.03■□□□□ 0.16
HMGN1-213ENST00000482192 ZBTB7AO95365 584 aa16.03■□□□□ 0.16
HMGN1-213ENST00000482192 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
HMGN1-213ENST00000482192 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
HMGN1-213ENST00000482192 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
HMGN1-213ENST00000482192 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
HMGN1-213ENST00000482192 HMOX1P09601 288 aa16.01■□□□□ 0.15
HMGN1-213ENST00000482192 MTFR1LQ9H019 292 aa16.01■□□□□ 0.15
HMGN1-213ENST00000482192 PPP1R1BQ9UD71 204 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-213ENST00000482192 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-213ENST00000482192 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
HMGN1-213ENST00000482192 QSER1Q2KHR3 1735 aa16■□□□□ 0.15
HMGN1-213ENST00000482192 C5P01031 1676 aa16■□□□□ 0.15
HMGN1-213ENST00000482192 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
HMGN1-213ENST00000482192 U2SURPO15042 1029 aaKnown RBP15.99■□□□□ 0.15
HMGN1-213ENST00000482192 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
HMGN1-213ENST00000482192 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
HMGN1-213ENST00000482192 PTGER2P43116 358 aa15.98■□□□□ 0.15
HMGN1-213ENST00000482192 SIK1P57059 783 aa15.98■□□□□ 0.15
HMGN1-213ENST00000482192 CABP4P57796 275 aa15.98■□□□□ 0.15
HMGN1-213ENST00000482192 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
HMGN1-213ENST00000482192 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
HMGN1-213ENST00000482192 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-213ENST00000482192 SLC16A10Q8TF71 515 aa15.97■□□□□ 0.15
HMGN1-213ENST00000482192 ATG3Q9NT62 314 aa15.97■□□□□ 0.15
HMGN1-213ENST00000482192 C4BP0C0L5 1744 aa15.95■□□□□ 0.14
HMGN1-213ENST00000482192 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
HMGN1-213ENST00000482192 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
HMGN1-213ENST00000482192 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
HMGN1-213ENST00000482192 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
HMGN1-213ENST00000482192 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
HMGN1-213ENST00000482192 FLAD1Q8NFF5 587 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms