RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
GARNL3-217ENST00000481875 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
GARNL3-217ENST00000481875 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
GARNL3-217ENST00000481875 MAP3K5Q99683 1374 aa16.18■□□□□ 0.18
GARNL3-217ENST00000481875 FYB1O15117 783 aa16.18■□□□□ 0.18
GARNL3-217ENST00000481875 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
GARNL3-217ENST00000481875 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
GARNL3-217ENST00000481875 LY75O60449 1722 aa16.17■□□□□ 0.18
GARNL3-217ENST00000481875 TMF1P82094 1093 aa16.17■□□□□ 0.18
GARNL3-217ENST00000481875 SLC16A10Q8TF71 515 aa16.17■□□□□ 0.18
GARNL3-217ENST00000481875 CHD4Q14839 1912 aa16.16■□□□□ 0.18
GARNL3-217ENST00000481875 AMPHP49418 695 aa16.16■□□□□ 0.18
GARNL3-217ENST00000481875 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
GARNL3-217ENST00000481875 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
GARNL3-217ENST00000481875 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
GARNL3-217ENST00000481875 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
GARNL3-217ENST00000481875 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
GARNL3-217ENST00000481875 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
GARNL3-217ENST00000481875 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
GARNL3-217ENST00000481875 USP47Q96K76 1375 aa16.14■□□□□ 0.17
GARNL3-217ENST00000481875 DDX54Q8TDD1 881 aaKnown RBP16.14■□□□□ 0.17
GARNL3-217ENST00000481875 NSD2O96028 1365 aa16.13■□□□□ 0.17
GARNL3-217ENST00000481875 FBLN1P23142 703 aa16.13■□□□□ 0.17
GARNL3-217ENST00000481875 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
GARNL3-217ENST00000481875 LTV1Q96GA3 475 aaPredicted RBP16.13■□□□□ 0.17
GARNL3-217ENST00000481875 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
GARNL3-217ENST00000481875 DOT1LQ8TEK3 1739 aa16.13■□□□□ 0.17
GARNL3-217ENST00000481875 INSRP06213 1382 aa16.13■□□□□ 0.17
GARNL3-217ENST00000481875 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
GARNL3-217ENST00000481875 HMGB2P26583 209 aaKnown RBP16.12■□□□□ 0.17
GARNL3-217ENST00000481875 NBPF6Q5VWK0 638 aa16.12■□□□□ 0.17
GARNL3-217ENST00000481875 NBPF4Q96M43 638 aa16.12■□□□□ 0.17
GARNL3-217ENST00000481875 MEGF6O75095 1541 aa16.12■□□□□ 0.17
GARNL3-217ENST00000481875 PRIM1P49642 420 aaKnown RBP16.11■□□□□ 0.17
GARNL3-217ENST00000481875 ARXQ96QS3 562 aa16.11■□□□□ 0.17
GARNL3-217ENST00000481875 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
GARNL3-217ENST00000481875 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
GARNL3-217ENST00000481875 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
GARNL3-217ENST00000481875 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
GARNL3-217ENST00000481875 PNPLA7Q6ZV29 1317 aa16.09■□□□□ 0.17
GARNL3-217ENST00000481875 FLT4P35916 1363 aa16.09■□□□□ 0.17
GARNL3-217ENST00000481875 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
GARNL3-217ENST00000481875 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
GARNL3-217ENST00000481875 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
GARNL3-217ENST00000481875 HSP90AB2PQ58FF8 381 aa16.07■□□□□ 0.16
GARNL3-217ENST00000481875 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
GARNL3-217ENST00000481875 CARD14Q9BXL6 1004 aa16.07■□□□□ 0.16
GARNL3-217ENST00000481875 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
GARNL3-217ENST00000481875 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
GARNL3-217ENST00000481875 TATP17735 454 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-217ENST00000481875 SYTL4Q96C24 671 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-217ENST00000481875 TFCP2L1Q9NZI6 479 aa16.05■□□□□ 0.16
GARNL3-217ENST00000481875 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
GARNL3-217ENST00000481875 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
GARNL3-217ENST00000481875 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
GARNL3-217ENST00000481875 ITGB4P16144 1822 aa16.04■□□□□ 0.16
GARNL3-217ENST00000481875 POLD1P28340 1107 aa16.04■□□□□ 0.16
GARNL3-217ENST00000481875 PLEKHG2Q9H7P9 1386 aa16.03■□□□□ 0.16
GARNL3-217ENST00000481875 WASHC2AQ641Q2 1341 aa16.03■□□□□ 0.16
GARNL3-217ENST00000481875 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-217ENST00000481875 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-217ENST00000481875 C5P01031 1676 aa16.02■□□□□ 0.16
GARNL3-217ENST00000481875 ZEB1P37275 1124 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-217ENST00000481875 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-217ENST00000481875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.16
GARNL3-217ENST00000481875 CYP27B1O15528 508 aa16.01■□□□□ 0.15
GARNL3-217ENST00000481875 USHBP1Q8N6Y0 703 aa16.01■□□□□ 0.15
GARNL3-217ENST00000481875 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
GARNL3-217ENST00000481875 KCNQ4P56696 695 aa16■□□□□ 0.15
GARNL3-217ENST00000481875 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
GARNL3-217ENST00000481875 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-217ENST00000481875 COL23A1Q86Y22 540 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-217ENST00000481875 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-217ENST00000481875 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
GARNL3-217ENST00000481875 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
GARNL3-217ENST00000481875 PALLDQ8WX93 1383 aa15.97■□□□□ 0.15
GARNL3-217ENST00000481875 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
GARNL3-217ENST00000481875 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
GARNL3-217ENST00000481875 UBR3Q6ZT12 1888 aa15.96■□□□□ 0.15
GARNL3-217ENST00000481875 C4BP0C0L5 1744 aa15.95■□□□□ 0.14
GARNL3-217ENST00000481875 GPR162Q16538 588 aa15.95■□□□□ 0.14
GARNL3-217ENST00000481875 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
GARNL3-217ENST00000481875 EYA1Q99502 592 aa15.95■□□□□ 0.14
GARNL3-217ENST00000481875 PIGBQ92521 554 aa15.94■□□□□ 0.14
GARNL3-217ENST00000481875 CD2APQ9Y5K6 639 aa15.94■□□□□ 0.14
GARNL3-217ENST00000481875 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
GARNL3-217ENST00000481875 GRIN3BO60391 1043 aa15.92■□□□□ 0.14
GARNL3-217ENST00000481875 NLGN2Q8NFZ4 835 aa15.92■□□□□ 0.14
GARNL3-217ENST00000481875 IFNL2Q8IZJ0 200 aa15.91■□□□□ 0.14
GARNL3-217ENST00000481875 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
GARNL3-217ENST00000481875 PPM1GO15355 546 aaPredicted RBP15.9■□□□□ 0.14
GARNL3-217ENST00000481875 PHKG2P15735 406 aa15.9■□□□□ 0.14
GARNL3-217ENST00000481875 SSFA2P28290 1259 aa15.9■□□□□ 0.14
GARNL3-217ENST00000481875 SIK1P57059 783 aa15.9■□□□□ 0.14
GARNL3-217ENST00000481875 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
GARNL3-217ENST00000481875 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
GARNL3-217ENST00000481875 IGSF1Q8N6C5 1336 aa15.89■□□□□ 0.13
GARNL3-217ENST00000481875 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
GARNL3-217ENST00000481875 YBX3P16989 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
GARNL3-217ENST00000481875 AK7Q96M32 723 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms