RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
CLIP4-210ENST00000481628 AMPHP49418 695 aa12.79□□□□□ -0.36
CLIP4-210ENST00000481628 SLC16A10Q8TF71 515 aa12.79□□□□□ -0.36
CLIP4-210ENST00000481628 LTV1Q96GA3 475 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-210ENST00000481628 SYT17Q9BSW7 474 aa12.79□□□□□ -0.36
CLIP4-210ENST00000481628 INSRP06213 1382 aa12.79□□□□□ -0.36
CLIP4-210ENST00000481628 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
CLIP4-210ENST00000481628 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
CLIP4-210ENST00000481628 FBLN1P23142 703 aa12.78□□□□□ -0.36
CLIP4-210ENST00000481628 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
CLIP4-210ENST00000481628 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
CLIP4-210ENST00000481628 FLT4P35916 1363 aa12.78□□□□□ -0.36
CLIP4-210ENST00000481628 CDCA8Q53HL2 280 aa12.77□□□□□ -0.37
CLIP4-210ENST00000481628 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
CLIP4-210ENST00000481628 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
CLIP4-210ENST00000481628 ARXQ96QS3 562 aa12.77□□□□□ -0.37
CLIP4-210ENST00000481628 PNPLA7Q6ZV29 1317 aa12.77□□□□□ -0.37
CLIP4-210ENST00000481628 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
CLIP4-210ENST00000481628 TRIM26Q12899 539 aaPredicted RBP12.76□□□□□ -0.37
CLIP4-210ENST00000481628 RRS1Q15050 365 aaKnown RBP12.76□□□□□ -0.37
CLIP4-210ENST00000481628 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
CLIP4-210ENST00000481628 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
CLIP4-210ENST00000481628 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
CLIP4-210ENST00000481628 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
CLIP4-210ENST00000481628 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 CARD14Q9BXL6 1004 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 C5P01031 1676 aa12.73□□□□□ -0.37
CLIP4-210ENST00000481628 CHD4Q14839 1912 aa12.72□□□□□ -0.37
CLIP4-210ENST00000481628 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
CLIP4-210ENST00000481628 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
CLIP4-210ENST00000481628 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
CLIP4-210ENST00000481628 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
CLIP4-210ENST00000481628 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
CLIP4-210ENST00000481628 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-210ENST00000481628 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.37
CLIP4-210ENST00000481628 CCNL1Q9UK58 526 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-210ENST00000481628 TAF1LQ8IZX4 1826 aa12.71□□□□□ -0.38
CLIP4-210ENST00000481628 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
CLIP4-210ENST00000481628 POLD1P28340 1107 aa12.7□□□□□ -0.38
CLIP4-210ENST00000481628 KCNQ4P56696 695 aa12.7□□□□□ -0.38
CLIP4-210ENST00000481628 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
CLIP4-210ENST00000481628 CYP27B1O15528 508 aa12.69□□□□□ -0.38
CLIP4-210ENST00000481628 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
CLIP4-210ENST00000481628 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
CLIP4-210ENST00000481628 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
CLIP4-210ENST00000481628 ITGB4P16144 1822 aa12.68□□□□□ -0.38
CLIP4-210ENST00000481628 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
CLIP4-210ENST00000481628 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
CLIP4-210ENST00000481628 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
CLIP4-210ENST00000481628 UTRNP46939 3433 aa12.67□□□□□ -0.38
CLIP4-210ENST00000481628 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
CLIP4-210ENST00000481628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLIP4-210ENST00000481628 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
CLIP4-210ENST00000481628 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-210ENST00000481628 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
CLIP4-210ENST00000481628 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
CLIP4-210ENST00000481628 EYA1Q99502 592 aa12.64□□□□□ -0.39
CLIP4-210ENST00000481628 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
CLIP4-210ENST00000481628 GPR162Q16538 588 aa12.63□□□□□ -0.39
CLIP4-210ENST00000481628 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
CLIP4-210ENST00000481628 ZNF831Q5JPB2 1677 aa12.63□□□□□ -0.39
CLIP4-210ENST00000481628 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
CLIP4-210ENST00000481628 PIGBQ92521 554 aa12.62□□□□□ -0.39
CLIP4-210ENST00000481628 KDRP35968 1356 aa12.61□□□□□ -0.39
CLIP4-210ENST00000481628 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
CLIP4-210ENST00000481628 CD2APQ9Y5K6 639 aa12.61□□□□□ -0.39
CLIP4-210ENST00000481628 IGSF1Q8N6C5 1336 aa12.61□□□□□ -0.39
CLIP4-210ENST00000481628 PHKG2P15735 406 aa12.6□□□□□ -0.39
CLIP4-210ENST00000481628 YBX3P16989 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLIP4-210ENST00000481628 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
CLIP4-210ENST00000481628 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
CLIP4-210ENST00000481628 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 PPM1GO15355 546 aaPredicted RBP12.59□□□□□ -0.39
CLIP4-210ENST00000481628 MSH5O43196 834 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 GRIN3BO60391 1043 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 SSFA2P28290 1259 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 SIK1P57059 783 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 MSL1Q68DK7 614 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 AK7Q96M32 723 aa12.59□□□□□ -0.39
CLIP4-210ENST00000481628 C1QTNF8P60827 252 aa12.58□□□□□ -0.4
CLIP4-210ENST00000481628 LINC00116Q8NCU8 138 aa12.58□□□□□ -0.4
CLIP4-210ENST00000481628 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
CLIP4-210ENST00000481628 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
CLIP4-210ENST00000481628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
CLIP4-210ENST00000481628 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLIP4-210ENST00000481628 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-210ENST00000481628 COL5A3P25940 1745 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-210ENST00000481628 ADCY9O60503 1353 aa12.56□□□□□ -0.4
CLIP4-210ENST00000481628 ITPK1Q13572 414 aa12.56□□□□□ -0.4
CLIP4-210ENST00000481628 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
CLIP4-210ENST00000481628 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
CLIP4-210ENST00000481628 KIF13BQ9NQT8 1826 aa12.55□□□□□ -0.4
CLIP4-210ENST00000481628 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
CLIP4-210ENST00000481628 ERVV-2B6SEH9 535 aa12.55□□□□□ -0.4
CLIP4-210ENST00000481628 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms