RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.33
HSPG2-209ENST00000480900 NCAPD2Q15021 1401 aa23.33■■□□□ 1.32
HSPG2-209ENST00000480900 ZCRB1Q8TBF4 217 aaKnown RBP23.32■■□□□ 1.32
HSPG2-209ENST00000480900 RAPGEF4Q8WZA2 1011 aa23.32■■□□□ 1.32
HSPG2-209ENST00000480900 DOT1LQ8TEK3 1739 aa23.32■■□□□ 1.32
HSPG2-209ENST00000480900 KCNQ2O43526 872 aa23.31■■□□□ 1.32
HSPG2-209ENST00000480900 TNNT2P45379 298 aaPredicted RBP23.31■■□□□ 1.32
HSPG2-209ENST00000480900 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
HSPG2-209ENST00000480900 DDX54Q8TDD1 881 aaKnown RBP23.31■■□□□ 1.32
HSPG2-209ENST00000480900 PKD1L3Q7Z443 1732 aa23.3■■□□□ 1.32
HSPG2-209ENST00000480900 NBPF14Q5TI25 921 aa23.3■■□□□ 1.32
HSPG2-209ENST00000480900 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
HSPG2-209ENST00000480900 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
HSPG2-209ENST00000480900 MORC1Q86VD1 984 aa23.27■■□□□ 1.32
HSPG2-209ENST00000480900 AMER1Q5JTC6 1135 aaPredicted RBP23.26■■□□□ 1.31
HSPG2-209ENST00000480900 PROM2Q8N271 834 aa23.25■■□□□ 1.31
HSPG2-209ENST00000480900 TXNRD1Q16881 649 aa23.24■■□□□ 1.31
HSPG2-209ENST00000480900 EYA1Q99502 592 aa23.24■■□□□ 1.31
HSPG2-209ENST00000480900 PCDH11XQ9BZA7 1347 aa23.24■■□□□ 1.31
HSPG2-209ENST00000480900 PCDH11YQ9BZA8 1340 aa23.24■■□□□ 1.31
HSPG2-209ENST00000480900 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
HSPG2-209ENST00000480900 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
HSPG2-209ENST00000480900 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
HSPG2-209ENST00000480900 ANO8Q9HCE9 1232 aaPredicted RBP23.2■■□□□ 1.3
HSPG2-209ENST00000480900 ITGB4P16144 1822 aa23.19■■□□□ 1.3
HSPG2-209ENST00000480900 LY75O60449 1722 aa23.19■■□□□ 1.3
HSPG2-209ENST00000480900 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
HSPG2-209ENST00000480900 IGSF1Q8N6C5 1336 aa23.18■■□□□ 1.3
HSPG2-209ENST00000480900 PRIM1P49642 420 aaKnown RBP23.18■■□□□ 1.3
HSPG2-209ENST00000480900 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
HSPG2-209ENST00000480900 CASZ1Q86V15 1759 aa23.18■■□□□ 1.3
HSPG2-209ENST00000480900 TOGARAM1Q9Y4F4 1720 aa23.18■■□□□ 1.3
HSPG2-209ENST00000480900 NPC1L1Q9UHC9 1359 aa23.17■■□□□ 1.3
HSPG2-209ENST00000480900 CYP27B1O15528 508 aa23.17■■□□□ 1.3
HSPG2-209ENST00000480900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.17■■□□□ 1.3
HSPG2-209ENST00000480900 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
HSPG2-209ENST00000480900 STK32BQ9NY57 414 aa23.14■■□□□ 1.29
HSPG2-209ENST00000480900 NKX1-1Q15270 411 aaPredicted RBP23.12■■□□□ 1.29
HSPG2-209ENST00000480900 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
HSPG2-209ENST00000480900 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
HSPG2-209ENST00000480900 QSER1Q2KHR3 1735 aa23.11■■□□□ 1.29
HSPG2-209ENST00000480900 SLC15A2Q16348 729 aa23.11■■□□□ 1.29
HSPG2-209ENST00000480900 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
HSPG2-209ENST00000480900 MTHFSP49914 203 aa23.09■■□□□ 1.29
HSPG2-209ENST00000480900 IL13P35225 146 aa23.08■■□□□ 1.29
HSPG2-209ENST00000480900 KDRP35968 1356 aa23.07■■□□□ 1.28
HSPG2-209ENST00000480900 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
HSPG2-209ENST00000480900 SPON1Q9HCB6 807 aa23.07■■□□□ 1.28
HSPG2-209ENST00000480900 TAF1LQ8IZX4 1826 aa23.07■■□□□ 1.28
HSPG2-209ENST00000480900 TUBGCP6Q96RT7 1819 aa23.07■■□□□ 1.28
HSPG2-209ENST00000480900 PHKG2P15735 406 aa23.06■■□□□ 1.28
HSPG2-209ENST00000480900 MPRIPQ6WCQ1 1025 aa23.05■■□□□ 1.28
HSPG2-209ENST00000480900 C5P01031 1676 aa23.05■■□□□ 1.28
HSPG2-209ENST00000480900 PLEKHO1Q53GL0 409 aaPredicted RBP23.04■■□□□ 1.28
HSPG2-209ENST00000480900 AEBP1Q8IUX7 1158 aa23.04■■□□□ 1.28
HSPG2-209ENST00000480900 PDGFDQ9GZP0 370 aaPredicted RBP23.04■■□□□ 1.28
HSPG2-209ENST00000480900 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
HSPG2-209ENST00000480900 AMOTQ4VCS5 1084 aa23.03■■□□□ 1.28
HSPG2-209ENST00000480900 SULT6B1Q6IMI4 303 aa23.03■■□□□ 1.28
HSPG2-209ENST00000480900 CCNL1Q9UK58 526 aaPredicted RBP23.03■■□□□ 1.28
HSPG2-209ENST00000480900 PALLDQ8WX93 1383 aa23.02■■□□□ 1.28
HSPG2-209ENST00000480900 SMARCC1Q92922 1105 aaPredicted RBP23.02■■□□□ 1.28
HSPG2-209ENST00000480900 AKT1S1Q96B36 256 aa23.02■■□□□ 1.28
HSPG2-209ENST00000480900 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
HSPG2-209ENST00000480900 PIGBQ92521 554 aa23.01■■□□□ 1.27
HSPG2-209ENST00000480900 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
HSPG2-209ENST00000480900 KCNQ4P56696 695 aa23■■□□□ 1.27
HSPG2-209ENST00000480900 ZNF530Q6P9A1 599 aaPredicted RBP23■■□□□ 1.27
HSPG2-209ENST00000480900 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
HSPG2-209ENST00000480900 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
HSPG2-209ENST00000480900 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
HSPG2-209ENST00000480900 CNGB1Q14028 1251 aaPredicted RBP22.99■■□□□ 1.27
HSPG2-209ENST00000480900 TMOD3Q9NYL9 352 aa22.99■■□□□ 1.27
HSPG2-209ENST00000480900 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
HSPG2-209ENST00000480900 ZBTB7AO95365 584 aa22.98■■□□□ 1.27
HSPG2-209ENST00000480900 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
HSPG2-209ENST00000480900 MTFR1LQ9H019 292 aa22.97■■□□□ 1.27
HSPG2-209ENST00000480900 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
HSPG2-209ENST00000480900 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
HSPG2-209ENST00000480900 PPP1R1BQ9UD71 204 aaPredicted RBP22.96■■□□□ 1.27
HSPG2-209ENST00000480900 KDM6AO15550 1401 aaPredicted RBP22.96■■□□□ 1.27
HSPG2-209ENST00000480900 COL24A1Q17RW2 1714 aa22.96■■□□□ 1.27
HSPG2-209ENST00000480900 C4BP0C0L5 1744 aa22.95■■□□□ 1.26
HSPG2-209ENST00000480900 TFCP2L1Q9NZI6 479 aa22.95■■□□□ 1.26
HSPG2-209ENST00000480900 PNPLA7Q6ZV29 1317 aa22.94■■□□□ 1.26
HSPG2-209ENST00000480900 HMOX1P09601 288 aa22.93■■□□□ 1.26
HSPG2-209ENST00000480900 PTGER2P43116 358 aa22.93■■□□□ 1.26
HSPG2-209ENST00000480900 ATF5Q9Y2D1 282 aaPredicted RBP22.93■■□□□ 1.26
HSPG2-209ENST00000480900 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
HSPG2-209ENST00000480900 UBR3Q6ZT12 1888 aa22.92■■□□□ 1.26
HSPG2-209ENST00000480900 SLC16A10Q8TF71 515 aa22.92■■□□□ 1.26
HSPG2-209ENST00000480900 ASAP1Q9ULH1 1129 aa22.92■■□□□ 1.26
HSPG2-209ENST00000480900 LOC102724428A0A0B4J2F2 783 aa22.9■■□□□ 1.26
HSPG2-209ENST00000480900 SIK1P57059 783 aa22.9■■□□□ 1.26
HSPG2-209ENST00000480900 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
HSPG2-209ENST00000480900 SGIP1Q9BQI5 828 aa22.9■■□□□ 1.26
HSPG2-209ENST00000480900 PPP2R1AP30153 589 aa22.89■■□□□ 1.25
HSPG2-209ENST00000480900 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
HSPG2-209ENST00000480900 ADAMTS7Q9UKP4 1686 aa22.88■■□□□ 1.25
HSPG2-209ENST00000480900 CABP4P57796 275 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms