RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 SPATA31A7Q8IWB4 1347 aa17.32■□□□□ 0.36
COL4A2-206ENST00000480609 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
COL4A2-206ENST00000480609 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
COL4A2-206ENST00000480609 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
COL4A2-206ENST00000480609 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
COL4A2-206ENST00000480609 MEGF6O75095 1541 aa17.31■□□□□ 0.36
COL4A2-206ENST00000480609 PARP4Q9UKK3 1724 aaKnown RBP17.31■□□□□ 0.36
COL4A2-206ENST00000480609 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
COL4A2-206ENST00000480609 RIPK4P57078 832 aa17.31■□□□□ 0.36
COL4A2-206ENST00000480609 MTHFSDQ2M296 383 aaKnown RBP17.31■□□□□ 0.36
COL4A2-206ENST00000480609 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
COL4A2-206ENST00000480609 IL2RBP14784 551 aa17.3■□□□□ 0.36
COL4A2-206ENST00000480609 TRMT2AQ8IZ69 625 aaKnown RBP17.3■□□□□ 0.36
COL4A2-206ENST00000480609 NGLY1Q96IV0 654 aa17.3■□□□□ 0.36
COL4A2-206ENST00000480609 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
COL4A2-206ENST00000480609 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
COL4A2-206ENST00000480609 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
COL4A2-206ENST00000480609 STRN4Q9NRL3 753 aa17.29■□□□□ 0.36
COL4A2-206ENST00000480609 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
COL4A2-206ENST00000480609 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
COL4A2-206ENST00000480609 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
COL4A2-206ENST00000480609 C8orf37Q96NL8 207 aa17.28■□□□□ 0.36
COL4A2-206ENST00000480609 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
COL4A2-206ENST00000480609 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
COL4A2-206ENST00000480609 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
COL4A2-206ENST00000480609 ATRNO75882 1429 aa17.27■□□□□ 0.35
COL4A2-206ENST00000480609 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
COL4A2-206ENST00000480609 E9PSI1 815 aa17.26■□□□□ 0.35
COL4A2-206ENST00000480609 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
COL4A2-206ENST00000480609 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
COL4A2-206ENST00000480609 USP21Q9UK80 565 aa17.26■□□□□ 0.35
COL4A2-206ENST00000480609 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
COL4A2-206ENST00000480609 ONECUT3O60422 494 aaPredicted RBP17.25■□□□□ 0.35
COL4A2-206ENST00000480609 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
COL4A2-206ENST00000480609 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
COL4A2-206ENST00000480609 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
COL4A2-206ENST00000480609 AFF2P51816 1311 aa17.24■□□□□ 0.35
COL4A2-206ENST00000480609 PCDH11XQ9BZA7 1347 aa17.24■□□□□ 0.35
COL4A2-206ENST00000480609 PCDH11YQ9BZA8 1340 aa17.24■□□□□ 0.35
COL4A2-206ENST00000480609 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
COL4A2-206ENST00000480609 ZNF853P0CG23 659 aa17.24■□□□□ 0.35
COL4A2-206ENST00000480609 MEX3CQ5U5Q3 659 aaKnown RBP17.24■□□□□ 0.35
COL4A2-206ENST00000480609 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
COL4A2-206ENST00000480609 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
COL4A2-206ENST00000480609 TNS2Q63HR2 1409 aa17.23■□□□□ 0.35
COL4A2-206ENST00000480609 PHKG2P15735 406 aa17.23■□□□□ 0.35
COL4A2-206ENST00000480609 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
COL4A2-206ENST00000480609 TRPC5Q9UL62 973 aaPredicted RBP17.23■□□□□ 0.35
COL4A2-206ENST00000480609 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
COL4A2-206ENST00000480609 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
COL4A2-206ENST00000480609 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
COL4A2-206ENST00000480609 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
COL4A2-206ENST00000480609 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.35
COL4A2-206ENST00000480609 MRC1P22897 1456 aa17.21■□□□□ 0.35
COL4A2-206ENST00000480609 CYP27B1O15528 508 aa17.21■□□□□ 0.35
COL4A2-206ENST00000480609 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
COL4A2-206ENST00000480609 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
COL4A2-206ENST00000480609 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
COL4A2-206ENST00000480609 THSD7AQ9UPZ6 1657 aa17.2■□□□□ 0.34
COL4A2-206ENST00000480609 GNAI1P63096 354 aa17.2■□□□□ 0.34
COL4A2-206ENST00000480609 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
COL4A2-206ENST00000480609 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
COL4A2-206ENST00000480609 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
COL4A2-206ENST00000480609 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
COL4A2-206ENST00000480609 GLI3P10071 1580 aa17.19■□□□□ 0.34
COL4A2-206ENST00000480609 CHL1O00533 1208 aa17.19■□□□□ 0.34
COL4A2-206ENST00000480609 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
COL4A2-206ENST00000480609 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
COL4A2-206ENST00000480609 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
COL4A2-206ENST00000480609 BCL9O00512 1426 aa17.19■□□□□ 0.34
COL4A2-206ENST00000480609 EXOC5O00471 708 aa17.18■□□□□ 0.34
COL4A2-206ENST00000480609 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
COL4A2-206ENST00000480609 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
COL4A2-206ENST00000480609 KDM6AO15550 1401 aaPredicted RBP17.18■□□□□ 0.34
COL4A2-206ENST00000480609 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
COL4A2-206ENST00000480609 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
COL4A2-206ENST00000480609 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
COL4A2-206ENST00000480609 DDB1Q16531 1140 aa17.15■□□□□ 0.34
COL4A2-206ENST00000480609 MCM10Q7L590 875 aa17.15■□□□□ 0.34
COL4A2-206ENST00000480609 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
COL4A2-206ENST00000480609 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
COL4A2-206ENST00000480609 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
COL4A2-206ENST00000480609 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
COL4A2-206ENST00000480609 QTRT2Q9H974 415 aaKnown RBP17.14■□□□□ 0.33
COL4A2-206ENST00000480609 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
COL4A2-206ENST00000480609 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
COL4A2-206ENST00000480609 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
COL4A2-206ENST00000480609 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
COL4A2-206ENST00000480609 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
COL4A2-206ENST00000480609 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
COL4A2-206ENST00000480609 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
COL4A2-206ENST00000480609 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
COL4A2-206ENST00000480609 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
COL4A2-206ENST00000480609 RBM6P78332 1123 aaKnown RBP17.11■□□□□ 0.33
COL4A2-206ENST00000480609 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
COL4A2-206ENST00000480609 TEFQ10587 303 aa17.1■□□□□ 0.33
COL4A2-206ENST00000480609 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
COL4A2-206ENST00000480609 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
COL4A2-206ENST00000480609 KDM3BQ7LBC6 1761 aa17.09■□□□□ 0.33
COL4A2-206ENST00000480609 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms