RNA–Protein interactions for RNA: ENST00000480421.5

TMEM139-207, Transcript of transmembrane protein 139, humanhuman

TSL 3

Gene TMEM139, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-207ENST00000480421 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.24
TMEM139-207ENST00000480421 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
TMEM139-207ENST00000480421 UTRNP46939 3433 aa16.51■□□□□ 0.23
TMEM139-207ENST00000480421 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
TMEM139-207ENST00000480421 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
TMEM139-207ENST00000480421 ITGB4P16144 1822 aa16.51■□□□□ 0.23
TMEM139-207ENST00000480421 C5P01031 1676 aa16.5■□□□□ 0.23
TMEM139-207ENST00000480421 POLD1P28340 1107 aa16.5■□□□□ 0.23
TMEM139-207ENST00000480421 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
TMEM139-207ENST00000480421 MAP2P11137 1827 aaKnown RBP16.49■□□□□ 0.23
TMEM139-207ENST00000480421 CGNL1Q0VF96 1302 aa16.49■□□□□ 0.23
TMEM139-207ENST00000480421 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
TMEM139-207ENST00000480421 TMF1P82094 1093 aa16.49■□□□□ 0.23
TMEM139-207ENST00000480421 TFCP2L1Q9NZI6 479 aa16.49■□□□□ 0.23
TMEM139-207ENST00000480421 MEGF6O75095 1541 aa16.49■□□□□ 0.23
TMEM139-207ENST00000480421 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
TMEM139-207ENST00000480421 ZNF784Q8NCA9 323 aaPredicted RBP16.47■□□□□ 0.23
TMEM139-207ENST00000480421 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
TMEM139-207ENST00000480421 FBLN1P23142 703 aa16.46■□□□□ 0.23
TMEM139-207ENST00000480421 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
TMEM139-207ENST00000480421 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
TMEM139-207ENST00000480421 NSD2O96028 1365 aa16.46■□□□□ 0.23
TMEM139-207ENST00000480421 USP47Q96K76 1375 aa16.46■□□□□ 0.23
TMEM139-207ENST00000480421 FYB1O15117 783 aa16.45■□□□□ 0.22
TMEM139-207ENST00000480421 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
TMEM139-207ENST00000480421 GPR162Q16538 588 aa16.45■□□□□ 0.22
TMEM139-207ENST00000480421 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
TMEM139-207ENST00000480421 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
TMEM139-207ENST00000480421 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
TMEM139-207ENST00000480421 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
TMEM139-207ENST00000480421 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
TMEM139-207ENST00000480421 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
TMEM139-207ENST00000480421 INSRP06213 1382 aa16.43■□□□□ 0.22
TMEM139-207ENST00000480421 ANKRD26Q9UPS8 1709 aa16.43■□□□□ 0.22
TMEM139-207ENST00000480421 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
TMEM139-207ENST00000480421 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
TMEM139-207ENST00000480421 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
TMEM139-207ENST00000480421 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
TMEM139-207ENST00000480421 FLT4P35916 1363 aa16.42■□□□□ 0.22
TMEM139-207ENST00000480421 KCNQ4P56696 695 aa16.42■□□□□ 0.22
TMEM139-207ENST00000480421 TOGARAM1Q9Y4F4 1720 aa16.42■□□□□ 0.22
TMEM139-207ENST00000480421 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
TMEM139-207ENST00000480421 UBR3Q6ZT12 1888 aa16.4■□□□□ 0.22
TMEM139-207ENST00000480421 MSH5O43196 834 aa16.4■□□□□ 0.22
TMEM139-207ENST00000480421 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
TMEM139-207ENST00000480421 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
TMEM139-207ENST00000480421 HSP90AB2PQ58FF8 381 aa16.38■□□□□ 0.21
TMEM139-207ENST00000480421 FLAD1Q8NFF5 587 aa16.38■□□□□ 0.21
TMEM139-207ENST00000480421 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
TMEM139-207ENST00000480421 PALLDQ8WX93 1383 aa16.36■□□□□ 0.21
TMEM139-207ENST00000480421 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
TMEM139-207ENST00000480421 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
TMEM139-207ENST00000480421 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
TMEM139-207ENST00000480421 GOLGB1Q14789 3259 aaKnown RBP16.34■□□□□ 0.21
TMEM139-207ENST00000480421 C1QTNF8P60827 252 aa16.34■□□□□ 0.21
TMEM139-207ENST00000480421 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
TMEM139-207ENST00000480421 NLGN2Q8NFZ4 835 aa16.34■□□□□ 0.21
TMEM139-207ENST00000480421 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
TMEM139-207ENST00000480421 NCAPD2Q15021 1401 aa16.33■□□□□ 0.2
TMEM139-207ENST00000480421 CYP27B1O15528 508 aa16.32■□□□□ 0.2
TMEM139-207ENST00000480421 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
TMEM139-207ENST00000480421 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
TMEM139-207ENST00000480421 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
TMEM139-207ENST00000480421 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
TMEM139-207ENST00000480421 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
TMEM139-207ENST00000480421 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
TMEM139-207ENST00000480421 AK7Q96M32 723 aa16.31■□□□□ 0.2
TMEM139-207ENST00000480421 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
TMEM139-207ENST00000480421 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
TMEM139-207ENST00000480421 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
TMEM139-207ENST00000480421 WASHC2AQ641Q2 1341 aa16.29■□□□□ 0.2
TMEM139-207ENST00000480421 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
TMEM139-207ENST00000480421 ZNF831Q5JPB2 1677 aa16.28■□□□□ 0.2
TMEM139-207ENST00000480421 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMEM139-207ENST00000480421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMEM139-207ENST00000480421 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.2
TMEM139-207ENST00000480421 PIGBQ92521 554 aa16.27■□□□□ 0.2
TMEM139-207ENST00000480421 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
TMEM139-207ENST00000480421 SSFA2P28290 1259 aa16.26■□□□□ 0.19
TMEM139-207ENST00000480421 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
TMEM139-207ENST00000480421 EYA1Q99502 592 aa16.26■□□□□ 0.19
TMEM139-207ENST00000480421 TMOD3Q9NYL9 352 aa16.26■□□□□ 0.19
TMEM139-207ENST00000480421 VIRMAQ69YN4 1812 aaKnown RBP16.25■□□□□ 0.19
TMEM139-207ENST00000480421 PHF14O94880 888 aa16.25■□□□□ 0.19
TMEM139-207ENST00000480421 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
TMEM139-207ENST00000480421 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
TMEM139-207ENST00000480421 SIK1P57059 783 aa16.24■□□□□ 0.19
TMEM139-207ENST00000480421 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
TMEM139-207ENST00000480421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.23■□□□□ 0.19
TMEM139-207ENST00000480421 PHKG2P15735 406 aa16.23■□□□□ 0.19
TMEM139-207ENST00000480421 POLKQ9UBT6 870 aa16.23■□□□□ 0.19
TMEM139-207ENST00000480421 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
TMEM139-207ENST00000480421 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
TMEM139-207ENST00000480421 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
TMEM139-207ENST00000480421 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
TMEM139-207ENST00000480421 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
TMEM139-207ENST00000480421 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
TMEM139-207ENST00000480421 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
TMEM139-207ENST00000480421 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
TMEM139-207ENST00000480421 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms