RNA–Protein interactions for RNA: ENST00000480326.1

SOX13-204, Transcript of SRY-box 13, humanhuman

TSL 5

Gene SOX13, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX13-204ENST00000480326 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
SOX13-204ENST00000480326 NFE2L2Q16236 605 aa13.26□□□□□ -0.29
SOX13-204ENST00000480326 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
SOX13-204ENST00000480326 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
SOX13-204ENST00000480326 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
SOX13-204ENST00000480326 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
SOX13-204ENST00000480326 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
SOX13-204ENST00000480326 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
SOX13-204ENST00000480326 ATRNO75882 1429 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 PCDH11XQ9BZA7 1347 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 PCDH11YQ9BZA8 1340 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 APAF1O14727 1248 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
SOX13-204ENST00000480326 NRAPQ86VF7 1730 aa13.24□□□□□ -0.29
SOX13-204ENST00000480326 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
SOX13-204ENST00000480326 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
SOX13-204ENST00000480326 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
SOX13-204ENST00000480326 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
SOX13-204ENST00000480326 EXOC5O00471 708 aa13.22□□□□□ -0.29
SOX13-204ENST00000480326 RIPK4P57078 832 aa13.22□□□□□ -0.29
SOX13-204ENST00000480326 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
SOX13-204ENST00000480326 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
SOX13-204ENST00000480326 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
SOX13-204ENST00000480326 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
SOX13-204ENST00000480326 MAP3K5Q99683 1374 aa13.21□□□□□ -0.29
SOX13-204ENST00000480326 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
SOX13-204ENST00000480326 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
SOX13-204ENST00000480326 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
SOX13-204ENST00000480326 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
SOX13-204ENST00000480326 QTRT2Q9H974 415 aaKnown RBP13.21□□□□□ -0.29
SOX13-204ENST00000480326 MEGF6O75095 1541 aa13.2□□□□□ -0.3
SOX13-204ENST00000480326 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
SOX13-204ENST00000480326 DDB1Q16531 1140 aa13.2□□□□□ -0.3
SOX13-204ENST00000480326 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
SOX13-204ENST00000480326 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
SOX13-204ENST00000480326 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
SOX13-204ENST00000480326 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
SOX13-204ENST00000480326 IL16Q14005 1332 aa13.19□□□□□ -0.3
SOX13-204ENST00000480326 ONECUT3O60422 494 aaPredicted RBP13.18□□□□□ -0.3
SOX13-204ENST00000480326 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
SOX13-204ENST00000480326 PHKG2P15735 406 aa13.17□□□□□ -0.3
SOX13-204ENST00000480326 NEUROD2Q15784 382 aa13.17□□□□□ -0.3
SOX13-204ENST00000480326 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
SOX13-204ENST00000480326 WWC1Q8IX03 1113 aa13.17□□□□□ -0.3
SOX13-204ENST00000480326 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
SOX13-204ENST00000480326 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
SOX13-204ENST00000480326 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
SOX13-204ENST00000480326 A0A0G2JS52 829 aa13.16□□□□□ -0.3
SOX13-204ENST00000480326 E9PSI1 815 aa13.16□□□□□ -0.3
SOX13-204ENST00000480326 RXRBP28702 533 aa13.16□□□□□ -0.3
SOX13-204ENST00000480326 MYT1Q01538 1121 aa13.16□□□□□ -0.3
SOX13-204ENST00000480326 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
SOX13-204ENST00000480326 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
SOX13-204ENST00000480326 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
SOX13-204ENST00000480326 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
SOX13-204ENST00000480326 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
SOX13-204ENST00000480326 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
SOX13-204ENST00000480326 GNAI1P63096 354 aa13.14□□□□□ -0.31
SOX13-204ENST00000480326 TEFQ10587 303 aa13.14□□□□□ -0.31
SOX13-204ENST00000480326 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
SOX13-204ENST00000480326 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
SOX13-204ENST00000480326 CEMIPQ8WUJ3 1361 aa13.13□□□□□ -0.31
SOX13-204ENST00000480326 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
SOX13-204ENST00000480326 CYP27B1O15528 508 aa13.13□□□□□ -0.31
SOX13-204ENST00000480326 CENPBP07199 599 aaPredicted RBP13.13□□□□□ -0.31
SOX13-204ENST00000480326 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
SOX13-204ENST00000480326 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
SOX13-204ENST00000480326 BCL9O00512 1426 aa13.13□□□□□ -0.31
SOX13-204ENST00000480326 GLI3P10071 1580 aa13.12□□□□□ -0.31
SOX13-204ENST00000480326 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
SOX13-204ENST00000480326 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
SOX13-204ENST00000480326 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
SOX13-204ENST00000480326 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
SOX13-204ENST00000480326 THSD7AQ9UPZ6 1657 aa13.11□□□□□ -0.31
SOX13-204ENST00000480326 RGPD2P0DJD1 1756 aa13.1□□□□□ -0.31
SOX13-204ENST00000480326 CABP4P57796 275 aa13.1□□□□□ -0.31
SOX13-204ENST00000480326 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
SOX13-204ENST00000480326 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
SOX13-204ENST00000480326 MCM10Q7L590 875 aa13.1□□□□□ -0.31
SOX13-204ENST00000480326 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
SOX13-204ENST00000480326 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
SOX13-204ENST00000480326 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
SOX13-204ENST00000480326 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
SOX13-204ENST00000480326 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
SOX13-204ENST00000480326 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
SOX13-204ENST00000480326 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
SOX13-204ENST00000480326 MRC1P22897 1456 aa13.09□□□□□ -0.31
SOX13-204ENST00000480326 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
SOX13-204ENST00000480326 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
SOX13-204ENST00000480326 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
SOX13-204ENST00000480326 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
SOX13-204ENST00000480326 CHL1O00533 1208 aa13.07□□□□□ -0.32
SOX13-204ENST00000480326 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
SOX13-204ENST00000480326 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
SOX13-204ENST00000480326 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
SOX13-204ENST00000480326 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
SOX13-204ENST00000480326 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms