RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MBIPQ9NS73 344 aa14.18□□□□□ -0.14
VTI1A-204ENST00000480057 ERBB3P21860 1342 aa14.17□□□□□ -0.14
VTI1A-204ENST00000480057 KIF16BQ96L93 1317 aa14.17□□□□□ -0.14
VTI1A-204ENST00000480057 GNAT3A8MTJ3 354 aa14.17□□□□□ -0.14
VTI1A-204ENST00000480057 AMOTQ4VCS5 1084 aa14.17□□□□□ -0.14
VTI1A-204ENST00000480057 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
VTI1A-204ENST00000480057 DDX17Q92841 729 aaKnown RBP14.17□□□□□ -0.14
VTI1A-204ENST00000480057 THUMPD2Q9BTF0 503 aaKnown RBP14.17□□□□□ -0.14
VTI1A-204ENST00000480057 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
VTI1A-204ENST00000480057 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
VTI1A-204ENST00000480057 ABCA3Q99758 1704 aa14.16□□□□□ -0.14
VTI1A-204ENST00000480057 FAM83GA6ND36 823 aa14.16□□□□□ -0.14
VTI1A-204ENST00000480057 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
VTI1A-204ENST00000480057 ZKSCAN2Q63HK3 967 aa14.16□□□□□ -0.14
VTI1A-204ENST00000480057 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
VTI1A-204ENST00000480057 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-204ENST00000480057 AHDC1Q5TGY3 1603 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-204ENST00000480057 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
VTI1A-204ENST00000480057 IPO8O15397 1037 aaKnown RBP14.15□□□□□ -0.14
VTI1A-204ENST00000480057 VAMP4O75379 141 aa14.15□□□□□ -0.14
VTI1A-204ENST00000480057 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-204ENST00000480057 SSH1Q8WYL5 1049 aa14.15□□□□□ -0.14
VTI1A-204ENST00000480057 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
VTI1A-204ENST00000480057 ZBTB7CA1YPR0 619 aa14.14□□□□□ -0.15
VTI1A-204ENST00000480057 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
VTI1A-204ENST00000480057 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
VTI1A-204ENST00000480057 CEMIPQ8WUJ3 1361 aa14.13□□□□□ -0.15
VTI1A-204ENST00000480057 ZC3H6P61129 1189 aaKnown RBP14.13□□□□□ -0.15
VTI1A-204ENST00000480057 TWISTNBQ3B726 338 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-204ENST00000480057 MCM10Q7L590 875 aa14.13□□□□□ -0.15
VTI1A-204ENST00000480057 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
VTI1A-204ENST00000480057 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
VTI1A-204ENST00000480057 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-204ENST00000480057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■□□□ 12.4
VTI1A-204ENST00000480057 COL22A1Q8NFW1 1626 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-204ENST00000480057 ADAMTS7Q9UKP4 1686 aa14.11□□□□□ -0.15
VTI1A-204ENST00000480057 ATF7IPQ6VMQ6 1270 aa14.11□□□□□ -0.15
VTI1A-204ENST00000480057 DZIP1LQ8IYY4 767 aaKnown RBP14.11□□□□□ -0.15
VTI1A-204ENST00000480057 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
VTI1A-204ENST00000480057 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
VTI1A-204ENST00000480057 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
VTI1A-204ENST00000480057 MRPL50Q8N5N7 158 aaKnown RBP14.1□□□□□ -0.15
VTI1A-204ENST00000480057 C8orf58Q8NAV2 365 aa14.1□□□□□ -0.15
VTI1A-204ENST00000480057 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
VTI1A-204ENST00000480057 MVPQ14764 893 aaKnown RBP14.09□□□□□ -0.15
VTI1A-204ENST00000480057 TAF7Q15545 349 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-204ENST00000480057 IL17REQ8NFR9 667 aa14.09□□□□□ -0.15
VTI1A-204ENST00000480057 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
VTI1A-204ENST00000480057 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
VTI1A-204ENST00000480057 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
VTI1A-204ENST00000480057 TRIM27P14373 513 aa14.08□□□□□ -0.16
VTI1A-204ENST00000480057 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-204ENST00000480057 CENPQQ7L2Z9 268 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-204ENST00000480057 FTSJ3Q8IY81 847 aaKnown RBP14.08□□□□□ -0.16
VTI1A-204ENST00000480057 TSPYL6Q8N831 410 aa14.08□□□□□ -0.16
VTI1A-204ENST00000480057 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
VTI1A-204ENST00000480057 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
VTI1A-204ENST00000480057 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.16
VTI1A-204ENST00000480057 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
VTI1A-204ENST00000480057 TATP17735 454 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-204ENST00000480057 C1orf141Q5JVX7 400 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 CLUAP1Q96AJ1 413 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 API5Q9BZZ5 524 aaKnown RBP14.07□□□□□ -0.16
VTI1A-204ENST00000480057 PRDM11Q9NQV5 511 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 DDX19BQ9UMR2 479 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 WDR17Q8IZU2 1322 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 KDM2BQ8NHM5 1336 aa14.07□□□□□ -0.16
VTI1A-204ENST00000480057 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
VTI1A-204ENST00000480057 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-204ENST00000480057 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
VTI1A-204ENST00000480057 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
VTI1A-204ENST00000480057 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
VTI1A-204ENST00000480057 SPG7Q9UQ90 795 aa14.06□□□□□ -0.16
VTI1A-204ENST00000480057 PARP4Q9UKK3 1724 aaKnown RBP14.06□□□□□ -0.16
VTI1A-204ENST00000480057 RLBP1P12271 317 aa14.05□□□□□ -0.16
VTI1A-204ENST00000480057 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-204ENST00000480057 CHRNA2Q15822 529 aa14.05□□□□□ -0.16
VTI1A-204ENST00000480057 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
VTI1A-204ENST00000480057 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
VTI1A-204ENST00000480057 VIRMAQ69YN4 1812 aaKnown RBP14.04□□□□□ -0.16
VTI1A-204ENST00000480057 CACNA1FO60840 1977 aa14.04□□□□□ -0.16
VTI1A-204ENST00000480057 RNMTO43148 476 aaKnown RBP14.04□□□□□ -0.16
VTI1A-204ENST00000480057 HOXB7P09629 217 aa14.04□□□□□ -0.16
VTI1A-204ENST00000480057 PTPRCP08575 1304 aa14.04□□□□□ -0.16
VTI1A-204ENST00000480057 MEGF6O75095 1541 aa14.04□□□□□ -0.16
VTI1A-204ENST00000480057 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
VTI1A-204ENST00000480057 ABCC4O15439 1325 aa14.03□□□□□ -0.16
VTI1A-204ENST00000480057 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
VTI1A-204ENST00000480057 COL16A1Q07092 1604 aaPredicted RBP14.02□□□□□ -0.16
VTI1A-204ENST00000480057 MRC1P22897 1456 aa14.02□□□□□ -0.16
VTI1A-204ENST00000480057 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-204ENST00000480057 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.17
VTI1A-204ENST00000480057 TEFQ10587 303 aa14.02□□□□□ -0.17
VTI1A-204ENST00000480057 TNNQ9UQP3 1299 aa14.02□□□□□ -0.17
VTI1A-204ENST00000480057 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
VTI1A-204ENST00000480057 TOM1O60784 492 aa14.01□□□□□ -0.17
VTI1A-204ENST00000480057 CCDC30Q5VVM6 783 aa14.01□□□□□ -0.17
VTI1A-204ENST00000480057 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms